RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 KCNQ2O43526 872 aa24.5■■□□□ 1.51
RFTN1-205ENST00000449415 TATP17735 454 aaPredicted RBP24.5■■□□□ 1.51
RFTN1-205ENST00000449415 NHSQ6T4R5 1651 aa24.5■■□□□ 1.51
RFTN1-205ENST00000449415 RREB1Q92766 1687 aa24.5■■□□□ 1.51
RFTN1-205ENST00000449415 EIF4A2Q14240 407 aaKnown RBP24.49■■□□□ 1.51
RFTN1-205ENST00000449415 EYA1Q99502 592 aa24.49■■□□□ 1.51
RFTN1-205ENST00000449415 NUP188Q5SRE5 1749 aa24.47■■□□□ 1.51
RFTN1-205ENST00000449415 PARD3Q8TEW0 1356 aa24.46■■□□□ 1.51
RFTN1-205ENST00000449415 PSDA5PKW4 1024 aaPredicted RBP24.46■■□□□ 1.51
RFTN1-205ENST00000449415 DOT1LQ8TEK3 1739 aa24.45■■□□□ 1.5
RFTN1-205ENST00000449415 BTAF1O14981 1849 aa24.45■■□□□ 1.5
RFTN1-205ENST00000449415 RGPD3A6NKT7 1758 aaPredicted RBP24.44■■□□□ 1.5
RFTN1-205ENST00000449415 RGPD4Q7Z3J3 1758 aa24.44■■□□□ 1.5
RFTN1-205ENST00000449415 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
RFTN1-205ENST00000449415 PLSCR1O15162 318 aa24.42■■□□□ 1.5
RFTN1-205ENST00000449415 PKD1L3Q7Z443 1732 aa24.41■■□□□ 1.5
RFTN1-205ENST00000449415 R3HDM1Q15032 1099 aaKnown RBP24.41■■□□□ 1.5
RFTN1-205ENST00000449415 SYTL4Q96C24 671 aaPredicted RBP24.41■■□□□ 1.5
RFTN1-205ENST00000449415 MTHFSP49914 203 aa24.4■■□□□ 1.5
RFTN1-205ENST00000449415 PCDH11XQ9BZA7 1347 aa24.39■■□□□ 1.5
RFTN1-205ENST00000449415 PCDH11YQ9BZA8 1340 aa24.39■■□□□ 1.5
RFTN1-205ENST00000449415 NPC1L1Q9UHC9 1359 aa24.39■■□□□ 1.49
RFTN1-205ENST00000449415 PRIM1P49642 420 aaKnown RBP24.38■■□□□ 1.49
RFTN1-205ENST00000449415 IGSF1Q8N6C5 1336 aa24.37■■□□□ 1.49
RFTN1-205ENST00000449415 PROM2Q8N271 834 aa24.37■■□□□ 1.49
RFTN1-205ENST00000449415 CYP27B1O15528 508 aa24.36■■□□□ 1.49
RFTN1-205ENST00000449415 NBPF14Q5TI25 921 aa24.36■■□□□ 1.49
RFTN1-205ENST00000449415 SPG7Q9UQ90 795 aa24.36■■□□□ 1.49
RFTN1-205ENST00000449415 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
RFTN1-205ENST00000449415 IL13P35225 146 aa24.34■■□□□ 1.49
RFTN1-205ENST00000449415 AEBP1Q8IUX7 1158 aa24.33■■□□□ 1.49
RFTN1-205ENST00000449415 TOGARAM1Q9Y4F4 1720 aa24.32■■□□□ 1.48
RFTN1-205ENST00000449415 ITGB4P16144 1822 aa24.31■■□□□ 1.48
RFTN1-205ENST00000449415 SULT6B1Q6IMI4 303 aa24.31■■□□□ 1.48
RFTN1-205ENST00000449415 ANO8Q9HCE9 1232 aaPredicted RBP24.29■■□□□ 1.48
RFTN1-205ENST00000449415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.29■■□□□ 1.48
RFTN1-205ENST00000449415 DIAPH1O60610 1272 aaKnown RBP24.27■■□□□ 1.48
RFTN1-205ENST00000449415 MPRIPQ6WCQ1 1025 aa24.27■■□□□ 1.48
RFTN1-205ENST00000449415 IFNL2Q8IZJ0 200 aa24.27■■□□□ 1.48
RFTN1-205ENST00000449415 PHKG2P15735 406 aa24.26■■□□□ 1.47
RFTN1-205ENST00000449415 PLEKHO1Q53GL0 409 aaPredicted RBP24.26■■□□□ 1.47
RFTN1-205ENST00000449415 LY75O60449 1722 aa24.25■■□□□ 1.47
RFTN1-205ENST00000449415 HMOX1P09601 288 aa24.25■■□□□ 1.47
RFTN1-205ENST00000449415 KCNQ4P56696 695 aa24.24■■□□□ 1.47
RFTN1-205ENST00000449415 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
RFTN1-205ENST00000449415 LRRC4BQ9NT99 713 aa24.24■■□□□ 1.47
RFTN1-205ENST00000449415 STK32BQ9NY57 414 aa24.24■■□□□ 1.47
RFTN1-205ENST00000449415 COL3A1P02461 1466 aaPredicted RBP24.24■■□□□ 1.47
RFTN1-205ENST00000449415 ZEB1P37275 1124 aaPredicted RBP24.23■■□□□ 1.47
RFTN1-205ENST00000449415 ZNF530Q6P9A1 599 aaPredicted RBP24.23■■□□□ 1.47
RFTN1-205ENST00000449415 KDRP35968 1356 aa24.23■■□□□ 1.47
RFTN1-205ENST00000449415 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
RFTN1-205ENST00000449415 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
RFTN1-205ENST00000449415 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
RFTN1-205ENST00000449415 AMOTQ4VCS5 1084 aa24.21■■□□□ 1.47
RFTN1-205ENST00000449415 PAPPAQ13219 1627 aa24.21■■□□□ 1.47
RFTN1-205ENST00000449415 PLEKHG2Q9H7P9 1386 aa24.2■■□□□ 1.46
RFTN1-205ENST00000449415 SLC15A2Q16348 729 aa24.2■■□□□ 1.46
RFTN1-205ENST00000449415 LRP5O75197 1615 aa24.2■■□□□ 1.46
RFTN1-205ENST00000449415 SLC27A3Q5K4L6 730 aa24.19■■□□□ 1.46
RFTN1-205ENST00000449415 PIGBQ92521 554 aa24.19■■□□□ 1.46
RFTN1-205ENST00000449415 CFAP53Q96M91 514 aa24.19■■□□□ 1.46
RFTN1-205ENST00000449415 PDGFDQ9GZP0 370 aaPredicted RBP24.18■■□□□ 1.46
RFTN1-205ENST00000449415 TMOD3Q9NYL9 352 aa24.18■■□□□ 1.46
RFTN1-205ENST00000449415 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
RFTN1-205ENST00000449415 C1orf141Q5JVX7 400 aa24.17■■□□□ 1.46
RFTN1-205ENST00000449415 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
RFTN1-205ENST00000449415 CASZ1Q86V15 1759 aa24.16■■□□□ 1.46
RFTN1-205ENST00000449415 ZNF827Q17R98 1081 aa24.16■■□□□ 1.46
RFTN1-205ENST00000449415 HSP90AB1P08238 724 aaKnown RBP24.15■■□□□ 1.46
RFTN1-205ENST00000449415 KDM6AO15550 1401 aaPredicted RBP24.14■■□□□ 1.45
RFTN1-205ENST00000449415 DCAF5Q96JK2 942 aa24.14■■□□□ 1.45
RFTN1-205ENST00000449415 VIRMAQ69YN4 1812 aaKnown RBP24.14■■□□□ 1.45
RFTN1-205ENST00000449415 TUBGCP6Q96RT7 1819 aa24.12■■□□□ 1.45
RFTN1-205ENST00000449415 C5P01031 1676 aa24.12■■□□□ 1.45
RFTN1-205ENST00000449415 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
RFTN1-205ENST00000449415 TAF1LQ8IZX4 1826 aa24.12■■□□□ 1.45
RFTN1-205ENST00000449415 SCN11AQ9UI33 1791 aa24.11■■□□□ 1.45
RFTN1-205ENST00000449415 AKT1S1Q96B36 256 aa24.11■■□□□ 1.45
RFTN1-205ENST00000449415 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
RFTN1-205ENST00000449415 SRCAPQ6ZRS2 3230 aa24.1■■□□□ 1.45
RFTN1-205ENST00000449415 ERVV-2B6SEH9 535 aa24.1■■□□□ 1.45
RFTN1-205ENST00000449415 ZBTB7AO95365 584 aa24.1■■□□□ 1.45
RFTN1-205ENST00000449415 CABP4P57796 275 aa24.1■■□□□ 1.45
RFTN1-205ENST00000449415 MTHFSDQ2M296 383 aaKnown RBP24.1■■□□□ 1.45
RFTN1-205ENST00000449415 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
RFTN1-205ENST00000449415 SPON1Q9HCB6 807 aa24.09■■□□□ 1.45
RFTN1-205ENST00000449415 NUDCQ9Y266 331 aa24.09■■□□□ 1.45
RFTN1-205ENST00000449415 ATG3Q9NT62 314 aa24.08■■□□□ 1.45
RFTN1-205ENST00000449415 TFCP2L1Q9NZI6 479 aa24.08■■□□□ 1.45
RFTN1-205ENST00000449415 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
RFTN1-205ENST00000449415 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
RFTN1-205ENST00000449415 ATF5Q9Y2D1 282 aaPredicted RBP24.07■■□□□ 1.44
RFTN1-205ENST00000449415 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
RFTN1-205ENST00000449415 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
RFTN1-205ENST00000449415 PRKAR2BP31323 418 aa24.05■■□□□ 1.44
RFTN1-205ENST00000449415 SIK1P57059 783 aa24.05■■□□□ 1.44
RFTN1-205ENST00000449415 NFATC2IPQ8NCF5 419 aa24.05■■□□□ 1.44
RFTN1-205ENST00000449415 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
RFTN1-205ENST00000449415 RSPH6AQ9H0K4 717 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms