RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 SYCP1Q15431 976 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 BCL2L13Q9BXK5 485 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 ANKRD36BQ8N2N9 1353 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 ZSCAN23Q3MJ62 389 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 USP32Q8NFA0 1604 aa9.15□□□□□ -0.94
TRIM49C-201ENST00000448984 FYB1O15117 783 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 SAMD1Q6SPF0 538 aaPredicted RBP9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 POLR3AO14802 1390 aaPredicted RBP9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 METP08581 1390 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
TRIM49C-201ENST00000448984 CAPN2P17655 700 aa9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 SPTLC3Q9NUV7 552 aa9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 CD163L1Q9NR16 1453 aa9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
TRIM49C-201ENST00000448984 SOX12O15370 315 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 CTIFO43310 598 aaKnown RBP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 RUNDC1Q96C34 613 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 PTMAP06454 111 aaKnown RBP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 TERF2Q15554 542 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 CTR9Q6PD62 1173 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 PANK1Q8TE04 598 aa9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 TSR2Q969E8 191 aaKnown RBP9.12□□□□□ -0.95
TRIM49C-201ENST00000448984 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
TRIM49C-201ENST00000448984 TSC1Q92574 1164 aa9.11□□□□□ -0.95
TRIM49C-201ENST00000448984 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
TRIM49C-201ENST00000448984 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 IGSF3O75054 1194 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 CAVIN1Q6NZI2 390 aaKnown RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 NME9Q86XW9 330 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 CFAP53Q96M91 514 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 SLC26A8Q96RN1 970 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 DDX41Q9UJV9 622 aaKnown RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 ANKRD26Q9UPS8 1709 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 KIF20BQ96Q89 1820 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 HSP90B1P14625 803 aaKnown RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 MAPK8IP2Q13387 824 aaPredicted RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 TERF2IPQ9NYB0 399 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 FEZ2Q9UHY8 353 aaPredicted RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 CTNNA3Q9UI47 895 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 MORC2Q9Y6X9 1032 aaPredicted RBP9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 CPS1P31327 1500 aa9.1□□□□□ -0.95
TRIM49C-201ENST00000448984 APPP05067 770 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 SSFA2P28290 1259 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 LTKP29376 864 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 CNPY4Q8N129 248 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 JARID2Q92833 1246 aaPredicted RBP9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 K7ELQ4 463 aaPredicted RBP9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 HMOX1P09601 288 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 CNKSR2Q8WXI2 1034 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
TRIM49C-201ENST00000448984 ATAD2Q6PL18 1390 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 RLBP1P12271 317 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 NUCB2P80303 420 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 KRT222Q8N1A0 295 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 RWDD1Q9H446 243 aaPredicted RBP9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 LMBRD1Q9NUN5 540 aa9.08□□□□□ -0.96
TRIM49C-201ENST00000448984 RRS1Q15050 365 aaKnown RBP9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 NGEFQ8N5V2 710 aa9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 SLIT1O75093 1534 aa9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 WASLO00401 505 aaPredicted RBP9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 PLEKHF1Q96S99 279 aa9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
TRIM49C-201ENST00000448984 TECPR2O15040 1411 aa9.06□□□□□ -0.96
TRIM49C-201ENST00000448984 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
TRIM49C-201ENST00000448984 RARSP54136 660 aaKnown RBP9.06□□□□□ -0.96
TRIM49C-201ENST00000448984 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms