RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GIGYF1O75420 1035 aaPredicted RBP25.41■■□□□ 1.66
CHCHD3-203ENST00000448878 NLGN2Q8NFZ4 835 aa25.41■■□□□ 1.66
CHCHD3-203ENST00000448878 CCNL1Q9UK58 526 aaPredicted RBP25.41■■□□□ 1.66
CHCHD3-203ENST00000448878 ANKRD36BQ8N2N9 1353 aa25.41■■□□□ 1.66
CHCHD3-203ENST00000448878 MAP3K19Q56UN5 1328 aa25.4■■□□□ 1.66
CHCHD3-203ENST00000448878 FAM208AQ9UK61 1670 aaKnown RBP25.39■■□□□ 1.66
CHCHD3-203ENST00000448878 DOT1LQ8TEK3 1739 aa25.38■■□□□ 1.65
CHCHD3-203ENST00000448878 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
CHCHD3-203ENST00000448878 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
CHCHD3-203ENST00000448878 QSER1Q2KHR3 1735 aa25.37■■□□□ 1.65
CHCHD3-203ENST00000448878 USP47Q96K76 1375 aa25.36■■□□□ 1.65
CHCHD3-203ENST00000448878 USHBP1Q8N6Y0 703 aa25.35■■□□□ 1.65
CHCHD3-203ENST00000448878 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
CHCHD3-203ENST00000448878 COL23A1Q86Y22 540 aaPredicted RBP25.34■■□□□ 1.65
CHCHD3-203ENST00000448878 TUBGCP6Q96RT7 1819 aa25.34■■□□□ 1.65
CHCHD3-203ENST00000448878 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
CHCHD3-203ENST00000448878 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.65
CHCHD3-203ENST00000448878 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
CHCHD3-203ENST00000448878 RAPGEF4Q8WZA2 1011 aa25.33■■□□□ 1.65
CHCHD3-203ENST00000448878 NSD2O96028 1365 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 GRIN3BO60391 1043 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 NBPF6Q5VWK0 638 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 NBPF4Q96M43 638 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 MEGF6O75095 1541 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 LY75O60449 1722 aa25.32■■□□□ 1.64
CHCHD3-203ENST00000448878 YBX3P16989 372 aaKnown RBP eCLIP25.3■■□□□ 1.646e-7■■■□□ 17.7
CHCHD3-203ENST00000448878 GGNBP2Q9H3C7 697 aa25.3■■□□□ 1.64
CHCHD3-203ENST00000448878 TATP17735 454 aaPredicted RBP25.29■■□□□ 1.64
CHCHD3-203ENST00000448878 TESK2Q96S53 571 aa25.28■■□□□ 1.64
CHCHD3-203ENST00000448878 COL24A1Q17RW2 1714 aa25.28■■□□□ 1.64
CHCHD3-203ENST00000448878 SMG6Q86US8 1419 aaKnown RBP25.28■■□□□ 1.64
CHCHD3-203ENST00000448878 SLC24A1O60721 1099 aa25.27■■□□□ 1.64
CHCHD3-203ENST00000448878 SHANK3Q9BYB0 1731 aa25.26■■□□□ 1.63
CHCHD3-203ENST00000448878 MPRIPQ6WCQ1 1025 aa25.26■■□□□ 1.63
CHCHD3-203ENST00000448878 CGNL1Q0VF96 1302 aa25.26■■□□□ 1.63
CHCHD3-203ENST00000448878 RTL1A6NKG5 1358 aa25.25■■□□□ 1.63
CHCHD3-203ENST00000448878 FYB1O15117 783 aa25.24■■□□□ 1.63
CHCHD3-203ENST00000448878 HMGB2P26583 209 aaKnown RBP25.22■■□□□ 1.63
CHCHD3-203ENST00000448878 HSP90AB2PQ58FF8 381 aa25.22■■□□□ 1.63
CHCHD3-203ENST00000448878 FLAD1Q8NFF5 587 aa25.22■■□□□ 1.63
CHCHD3-203ENST00000448878 PCDH11XQ9BZA7 1347 aa25.21■■□□□ 1.63
CHCHD3-203ENST00000448878 PCDH11YQ9BZA8 1340 aa25.21■■□□□ 1.63
CHCHD3-203ENST00000448878 GOLGB1Q14789 3259 aaKnown RBP25.21■■□□□ 1.63
CHCHD3-203ENST00000448878 PALLDQ8WX93 1383 aa25.2■■□□□ 1.63
CHCHD3-203ENST00000448878 TMF1P82094 1093 aa25.2■■□□□ 1.62
CHCHD3-203ENST00000448878 AK7Q96M32 723 aa25.19■■□□□ 1.62
CHCHD3-203ENST00000448878 CD2APQ9Y5K6 639 aa25.19■■□□□ 1.62
CHCHD3-203ENST00000448878 C5P01031 1676 aa25.18■■□□□ 1.62
CHCHD3-203ENST00000448878 PHF14O94880 888 aa25.18■■□□□ 1.62
CHCHD3-203ENST00000448878 WWC3Q9ULE0 1092 aa25.18■■□□□ 1.62
CHCHD3-203ENST00000448878 ZNF526Q8TF50 670 aaPredicted RBP25.17■■□□□ 1.62
CHCHD3-203ENST00000448878 GPBP1L1Q9HC44 474 aaPredicted RBP25.17■■□□□ 1.62
CHCHD3-203ENST00000448878 SMARCC1Q92922 1105 aaPredicted RBP25.16■■□□□ 1.62
CHCHD3-203ENST00000448878 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
CHCHD3-203ENST00000448878 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
CHCHD3-203ENST00000448878 INSRP06213 1382 aa25.15■■□□□ 1.62
CHCHD3-203ENST00000448878 CYP27B1O15528 508 aa25.14■■□□□ 1.62
CHCHD3-203ENST00000448878 SMIM5Q71RC9 77 aa25.14■■□□□ 1.62
CHCHD3-203ENST00000448878 FLT4P35916 1363 aa25.14■■□□□ 1.61
CHCHD3-203ENST00000448878 TAF1LQ8IZX4 1826 aa25.1■■□□□ 1.61
CHCHD3-203ENST00000448878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.1■■□□□ 1.61
CHCHD3-203ENST00000448878 PIGBQ92521 554 aa25.1■■□□□ 1.61
CHCHD3-203ENST00000448878 C4BP0C0L5 1744 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 IFFO2Q5TF58 517 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 SPG7Q9UQ90 795 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 EMILIN1Q9Y6C2 1016 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 IGSF1Q8N6C5 1336 aa25.09■■□□□ 1.61
CHCHD3-203ENST00000448878 AMIGO3Q86WK7 504 aa25.08■■□□□ 1.61
CHCHD3-203ENST00000448878 KIF20BQ96Q89 1820 aa25.07■■□□□ 1.6
CHCHD3-203ENST00000448878 ITGB4P16144 1822 aa25.06■■□□□ 1.6
CHCHD3-203ENST00000448878 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
CHCHD3-203ENST00000448878 LOC102724428A0A0B4J2F2 783 aa25.05■■□□□ 1.6
CHCHD3-203ENST00000448878 SIK1P57059 783 aa25.05■■□□□ 1.6
CHCHD3-203ENST00000448878 TMOD3Q9NYL9 352 aa25.05■■□□□ 1.6
CHCHD3-203ENST00000448878 NSD3Q9BZ95 1437 aa25.04■■□□□ 1.6
CHCHD3-203ENST00000448878 TOGARAM1Q9Y4F4 1720 aa25.04■■□□□ 1.6
CHCHD3-203ENST00000448878 GNPATO15228 680 aa25.03■■□□□ 1.6
CHCHD3-203ENST00000448878 SSFA2P28290 1259 aa25.03■■□□□ 1.6
CHCHD3-203ENST00000448878 LINC00116Q8NCU8 138 aa25.03■■□□□ 1.6
CHCHD3-203ENST00000448878 ATP6V1AP38606 617 aa25.02■■□□□ 1.6
CHCHD3-203ENST00000448878 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
CHCHD3-203ENST00000448878 NKX1-1Q15270 411 aaPredicted RBP25.01■■□□□ 1.59
CHCHD3-203ENST00000448878 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
CHCHD3-203ENST00000448878 HSPA6P17066 643 aa25■■□□□ 1.59
CHCHD3-203ENST00000448878 UBR3Q6ZT12 1888 aa25■■□□□ 1.59
CHCHD3-203ENST00000448878 EYA1Q99502 592 aa24.99■■□□□ 1.59
CHCHD3-203ENST00000448878 CEP350Q5VT06 3117 aa24.99■■□□□ 1.59
CHCHD3-203ENST00000448878 PKD1L3Q7Z443 1732 aa24.98■■□□□ 1.59
CHCHD3-203ENST00000448878 ADCY9O60503 1353 aa24.98■■□□□ 1.59
CHCHD3-203ENST00000448878 IFNL2Q8IZJ0 200 aa24.98■■□□□ 1.59
CHCHD3-203ENST00000448878 ITPK1Q13572 414 aa24.97■■□□□ 1.59
CHCHD3-203ENST00000448878 MMP10P09238 476 aa24.96■■□□□ 1.59
CHCHD3-203ENST00000448878 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
CHCHD3-203ENST00000448878 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.58
CHCHD3-203ENST00000448878 PHKG2P15735 406 aa24.95■■□□□ 1.58
CHCHD3-203ENST00000448878 TNNT2P45379 298 aaPredicted RBP24.94■■□□□ 1.58
CHCHD3-203ENST00000448878 ATG3Q9NT62 314 aa24.94■■□□□ 1.58
CHCHD3-203ENST00000448878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.587e-7■■■□□ 17.9
CHCHD3-203ENST00000448878 TRAPPC3LQ5T215 181 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms