RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 PHRF1Q9P1Y6 1649 aaKnown RBP9.08□□□□□ -0.96
RFC4-209ENST00000448497 STRCQ7RTU9 1775 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 U2AF1L5P0DN76 240 aaPredicted RBP9.07□□□□□ -0.96
RFC4-209ENST00000448497 U2AF1Q01081 240 aaKnown RBP eCLIP9.07□□□□□ -0.96
RFC4-209ENST00000448497 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 CCDC146Q8IYE0 955 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
RFC4-209ENST00000448497 PPP4R2Q9NY27 417 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 PEAK1Q9H792 1746 aa9.07□□□□□ -0.96
RFC4-209ENST00000448497 MST1RQ04912 1400 aa9.06□□□□□ -0.96
RFC4-209ENST00000448497 DLG5Q8TDM6 1919 aa9.06□□□□□ -0.96
RFC4-209ENST00000448497 IL16Q14005 1332 aa9.05□□□□□ -0.96
RFC4-209ENST00000448497 TRPM3Q9HCF6 1732 aaPredicted RBP9.05□□□□□ -0.96
RFC4-209ENST00000448497 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
RFC4-209ENST00000448497 IL13P35225 146 aa9.05□□□□□ -0.96
RFC4-209ENST00000448497 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
RFC4-209ENST00000448497 NGDNQ8NEJ9 315 aaKnown RBP9.05□□□□□ -0.96
RFC4-209ENST00000448497 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
RFC4-209ENST00000448497 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
RFC4-209ENST00000448497 SBNO1A3KN83 1393 aa9.04□□□□□ -0.96
RFC4-209ENST00000448497 RSPH6AQ9H0K4 717 aa9.04□□□□□ -0.96
RFC4-209ENST00000448497 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
RFC4-209ENST00000448497 KDM4FA0A1W2PPD8 638 aa9.03□□□□□ -0.96
RFC4-209ENST00000448497 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
RFC4-209ENST00000448497 TMPOP42166 694 aaKnown RBP9.03□□□□□ -0.96
RFC4-209ENST00000448497 PMFBP1Q8TBY8 1022 aa9.03□□□□□ -0.96
RFC4-209ENST00000448497 C19orf44Q9H6X5 657 aa9.03□□□□□ -0.96
RFC4-209ENST00000448497 LTN1O94822 1766 aa9.03□□□□□ -0.96
RFC4-209ENST00000448497 MAPK8IP3Q9UPT6 1336 aa9.03□□□□□ -0.96
RFC4-209ENST00000448497 RTL1A6NKG5 1358 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 FLT4P35916 1363 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 NFAT5O94916 1531 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 ALS2Q96Q42 1657 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 NUTM2FA1L443 756 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 U2SURPO15042 1029 aaKnown RBP9.02□□□□□ -0.97
RFC4-209ENST00000448497 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.97
RFC4-209ENST00000448497 SLIT3O75094 1523 aa9.01□□□□□ -0.97
RFC4-209ENST00000448497 SENP3-EIF4A1A0A087X0R7 540 aa9.01□□□□□ -0.97
RFC4-209ENST00000448497 PDE4AP27815 886 aa9.01□□□□□ -0.97
RFC4-209ENST00000448497 C3orf67Q6ZVT6 689 aa9.01□□□□□ -0.97
RFC4-209ENST00000448497 PROSER2Q86WR7 435 aaPredicted RBP9.01□□□□□ -0.97
RFC4-209ENST00000448497 ARHGEF10O15013 1369 aa9□□□□□ -0.97
RFC4-209ENST00000448497 KDRP35968 1356 aa9□□□□□ -0.97
RFC4-209ENST00000448497 NEFMP07197 916 aa9□□□□□ -0.97
RFC4-209ENST00000448497 FBLN1P23142 703 aa9□□□□□ -0.97
RFC4-209ENST00000448497 RRS1Q15050 365 aaKnown RBP9□□□□□ -0.97
RFC4-209ENST00000448497 NFE2L2Q16236 605 aa9□□□□□ -0.97
RFC4-209ENST00000448497 CADPS2Q86UW7 1296 aa9□□□□□ -0.97
RFC4-209ENST00000448497 GOLGA6L2Q8N9W4 650 aaPredicted RBP9□□□□□ -0.97
RFC4-209ENST00000448497 MAP3K19Q56UN5 1328 aa9□□□□□ -0.97
RFC4-209ENST00000448497 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
RFC4-209ENST00000448497 PRKAR2BP31323 418 aa8.99□□□□□ -0.97
RFC4-209ENST00000448497 IRX6P78412 446 aaPredicted RBP8.99□□□□□ -0.97
RFC4-209ENST00000448497 CALD1Q05682 793 aaKnown RBP8.99□□□□□ -0.97
RFC4-209ENST00000448497 EIF4A2Q14240 407 aaKnown RBP8.99□□□□□ -0.97
RFC4-209ENST00000448497 TMEM94Q12767 1356 aa8.99□□□□□ -0.97
RFC4-209ENST00000448497 RIPK4P57078 832 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 LMOD3Q0VAK6 560 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 ESCO1Q5FWF5 840 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 MAMSTRQ6ZN01 415 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 ZNF428Q96B54 188 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 CRISPLD2Q9H0B8 497 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 WDR70Q9NW82 654 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 RRP7AQ9Y3A4 280 aaKnown RBP8.98□□□□□ -0.97
RFC4-209ENST00000448497 ABCC6O95255 1503 aa8.98□□□□□ -0.97
RFC4-209ENST00000448497 CAMTA1Q9Y6Y1 1673 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 CRYBG1Q9Y4K1 1723 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 PSME1Q06323 249 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 C14orf37Q86TY3 774 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 ABTB2Q8N961 1025 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 KCNH5Q8NCM2 988 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 GPHNQ9NQX3 736 aaPredicted RBP8.97□□□□□ -0.97
RFC4-209ENST00000448497 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
RFC4-209ENST00000448497 USP19O94966 1318 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 IGSF1Q8N6C5 1336 aa8.97□□□□□ -0.97
RFC4-209ENST00000448497 MED1Q15648 1581 aaPredicted RBP8.96□□□□□ -0.97
RFC4-209ENST00000448497 PDE3AQ14432 1141 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 HSP90AB2PQ58FF8 381 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 MSH6P52701 1360 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 NCAPD2Q15021 1401 aa8.96□□□□□ -0.98
RFC4-209ENST00000448497 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 ATF3P18847 181 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 HOXC9P31274 260 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 AMPHP49418 695 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 RARSP54136 660 aaKnown RBP8.95□□□□□ -0.98
RFC4-209ENST00000448497 HSPA2P54652 639 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
RFC4-209ENST00000448497 AAMPQ13685 434 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
RFC4-209ENST00000448497 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 SCUBE2Q9NQ36 999 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 FANCIQ9NVI1 1328 aa8.95□□□□□ -0.98
RFC4-209ENST00000448497 LRRC37A3O60309 1634 aa8.94□□□□□ -0.98
RFC4-209ENST00000448497 HMOX1P09601 288 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms