RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 MARCH10Q8NA82 808 aaPredicted RBP23.84■■□□□ 1.41
HLCS-205ENST00000448340 FAM208AQ9UK61 1670 aaKnown RBP23.83■■□□□ 1.41
HLCS-205ENST00000448340 CARD10Q9BWT7 1032 aa23.83■■□□□ 1.41
HLCS-205ENST00000448340 PDGFDQ9GZP0 370 aaPredicted RBP23.83■■□□□ 1.41
HLCS-205ENST00000448340 LRRC37A3O60309 1634 aa23.82■■□□□ 1.4
HLCS-205ENST00000448340 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
HLCS-205ENST00000448340 RGPD3A6NKT7 1758 aaPredicted RBP23.81■■□□□ 1.4
HLCS-205ENST00000448340 RGPD4Q7Z3J3 1758 aa23.81■■□□□ 1.4
HLCS-205ENST00000448340 NLRP2Q9NX02 1062 aa23.81■■□□□ 1.4
HLCS-205ENST00000448340 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
HLCS-205ENST00000448340 SBF2Q86WG5 1849 aa23.78■■□□□ 1.4
HLCS-205ENST00000448340 PTGER2P43116 358 aa23.78■■□□□ 1.4
HLCS-205ENST00000448340 CFAP53Q96M91 514 aa23.77■■□□□ 1.4
HLCS-205ENST00000448340 CDCA7Q9BWT1 371 aaPredicted RBP23.77■■□□□ 1.4
HLCS-205ENST00000448340 CASZ1Q86V15 1759 aa23.77■■□□□ 1.4
HLCS-205ENST00000448340 MYBBP1AQ9BQG0 1328 aaKnown RBP23.77■■□□□ 1.4
HLCS-205ENST00000448340 RGPD2P0DJD1 1756 aa23.76■■□□□ 1.39
HLCS-205ENST00000448340 ANP32CO43423 234 aa23.76■■□□□ 1.39
HLCS-205ENST00000448340 NBPF6Q5VWK0 638 aa23.76■■□□□ 1.39
HLCS-205ENST00000448340 NBPF4Q96M43 638 aa23.76■■□□□ 1.39
HLCS-205ENST00000448340 UTRNP46939 3433 aa23.74■■□□□ 1.39
HLCS-205ENST00000448340 DIAPH1O60610 1272 aaKnown RBP23.74■■□□□ 1.39
HLCS-205ENST00000448340 IL13P35225 146 aa23.74■■□□□ 1.39
HLCS-205ENST00000448340 COL3A1P02461 1466 aaPredicted RBP23.74■■□□□ 1.39
HLCS-205ENST00000448340 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
HLCS-205ENST00000448340 ZBTB7AO95365 584 aa23.73■■□□□ 1.39
HLCS-205ENST00000448340 EYA1Q99502 592 aa23.73■■□□□ 1.39
HLCS-205ENST00000448340 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
HLCS-205ENST00000448340 NCAPD2Q15021 1401 aa23.7■■□□□ 1.38
HLCS-205ENST00000448340 IGSF1Q8N6C5 1336 aa23.7■■□□□ 1.38
HLCS-205ENST00000448340 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
HLCS-205ENST00000448340 EXOC5O00471 708 aa23.69■■□□□ 1.38
HLCS-205ENST00000448340 SLC15A2Q16348 729 aa23.69■■□□□ 1.38
HLCS-205ENST00000448340 USHBP1Q8N6Y0 703 aa23.69■■□□□ 1.38
HLCS-205ENST00000448340 SGIP1Q9BQI5 828 aa23.69■■□□□ 1.38
HLCS-205ENST00000448340 IL2RBP14784 551 aa23.68■■□□□ 1.38
HLCS-205ENST00000448340 ATF5Q9Y2D1 282 aaPredicted RBP23.68■■□□□ 1.38
HLCS-205ENST00000448340 STK32BQ9NY57 414 aa23.66■■□□□ 1.38
HLCS-205ENST00000448340 NUDCQ9Y266 331 aa23.66■■□□□ 1.38
HLCS-205ENST00000448340 RAPGEF4Q8WZA2 1011 aa23.65■■□□□ 1.38
HLCS-205ENST00000448340 SYT17Q9BSW7 474 aa23.65■■□□□ 1.38
HLCS-205ENST00000448340 U2SURPO15042 1029 aaKnown RBP23.63■■□□□ 1.37
HLCS-205ENST00000448340 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
HLCS-205ENST00000448340 SULT6B1Q6IMI4 303 aa23.63■■□□□ 1.37
HLCS-205ENST00000448340 ZNF784Q8NCA9 323 aaPredicted RBP23.63■■□□□ 1.37
HLCS-205ENST00000448340 FHDC1Q9C0D6 1143 aaPredicted RBP23.63■■□□□ 1.37
HLCS-205ENST00000448340 MTFR1LQ9H019 292 aa23.63■■□□□ 1.37
HLCS-205ENST00000448340 KDRP35968 1356 aa23.63■■□□□ 1.37
HLCS-205ENST00000448340 TNS2Q63HR2 1409 aa23.62■■□□□ 1.37
HLCS-205ENST00000448340 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
HLCS-205ENST00000448340 MEGF6O75095 1541 aa23.62■■□□□ 1.37
HLCS-205ENST00000448340 AEBP1Q8IUX7 1158 aa23.6■■□□□ 1.37
HLCS-205ENST00000448340 PLEKHG2Q9H7P9 1386 aa23.6■■□□□ 1.37
HLCS-205ENST00000448340 HMOX1P09601 288 aa23.58■■□□□ 1.37
HLCS-205ENST00000448340 U2AF1L5P0DN76 240 aaPredicted RBP23.57■■□□□ 1.36
HLCS-205ENST00000448340 U2AF1Q01081 240 aaKnown RBP eCLIP23.57■■□□□ 1.36
HLCS-205ENST00000448340 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
HLCS-205ENST00000448340 ACSBG1Q96GR2 724 aa23.57■■□□□ 1.36
HLCS-205ENST00000448340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.36
HLCS-205ENST00000448340 PAPPAQ13219 1627 aa23.55■■□□□ 1.36
HLCS-205ENST00000448340 NHSQ6T4R5 1651 aa23.54■■□□□ 1.36
HLCS-205ENST00000448340 LRRC4BQ9NT99 713 aa23.54■■□□□ 1.36
HLCS-205ENST00000448340 SPG7Q9UQ90 795 aa23.54■■□□□ 1.36
HLCS-205ENST00000448340 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 FCHSD2O94868 740 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 ARXQ96QS3 562 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 RSPH6AQ9H0K4 717 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 PKD1L3Q7Z443 1732 aa23.53■■□□□ 1.36
HLCS-205ENST00000448340 AMOTQ4VCS5 1084 aa23.52■■□□□ 1.36
HLCS-205ENST00000448340 CCDC184Q52MB2 194 aa23.52■■□□□ 1.36
HLCS-205ENST00000448340 PLEKHO1Q53GL0 409 aaPredicted RBP23.52■■□□□ 1.36
HLCS-205ENST00000448340 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
HLCS-205ENST00000448340 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
HLCS-205ENST00000448340 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
HLCS-205ENST00000448340 PCDH11XQ9BZA7 1347 aa23.5■■□□□ 1.35
HLCS-205ENST00000448340 PCDH11YQ9BZA8 1340 aa23.5■■□□□ 1.35
HLCS-205ENST00000448340 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
HLCS-205ENST00000448340 AKT1S1Q96B36 256 aa23.49■■□□□ 1.35
HLCS-205ENST00000448340 PRKAR2BP31323 418 aa23.48■■□□□ 1.35
HLCS-205ENST00000448340 PNNQ9H307 717 aaKnown RBP23.48■■□□□ 1.35
HLCS-205ENST00000448340 CYP27B1O15528 508 aa23.46■■□□□ 1.35
HLCS-205ENST00000448340 IFNL2Q8IZJ0 200 aa23.45■■□□□ 1.34
HLCS-205ENST00000448340 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
HLCS-205ENST00000448340 ADAMTS8Q9UP79 889 aa23.45■■□□□ 1.34
HLCS-205ENST00000448340 CCER2I3L3R5 266 aa23.44■■□□□ 1.34
HLCS-205ENST00000448340 ZNF530Q6P9A1 599 aaPredicted RBP23.44■■□□□ 1.34
HLCS-205ENST00000448340 BTAF1O14981 1849 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 NEFMP07197 916 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 PHKG2P15735 406 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 C1QTNF8P60827 252 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 MTHFSDQ2M296 383 aaKnown RBP23.43■■□□□ 1.34
HLCS-205ENST00000448340 SLC27A3Q5K4L6 730 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 SLC16A10Q8TF71 515 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 PHACTR3Q96KR7 559 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 PLEKHF1Q96S99 279 aa23.43■■□□□ 1.34
HLCS-205ENST00000448340 NKX1-1Q15270 411 aaPredicted RBP23.42■■□□□ 1.34
HLCS-205ENST00000448340 MIER1Q8N108 512 aa23.42■■□□□ 1.34
HLCS-205ENST00000448340 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
HLCS-205ENST00000448340 C1orf141Q5JVX7 400 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms