RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.64■■□□□ 1.69
SGCE-207ENST00000447873 IL2RBP14784 551 aa25.64■■□□□ 1.69
SGCE-207ENST00000447873 CCDC9Q9Y3X0 531 aaKnown RBP25.64■■□□□ 1.69
SGCE-207ENST00000447873 WWC1Q8IX03 1113 aa25.63■■□□□ 1.69
SGCE-207ENST00000447873 PLEKHG2Q9H7P9 1386 aa25.63■■□□□ 1.69
SGCE-207ENST00000447873 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
SGCE-207ENST00000447873 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
SGCE-207ENST00000447873 TRIM35Q9UPQ4 493 aa25.62■■□□□ 1.69
SGCE-207ENST00000447873 AFF2P51816 1311 aa25.62■■□□□ 1.69
SGCE-207ENST00000447873 SPATA31A1Q5TZJ5 1347 aa25.62■■□□□ 1.69
SGCE-207ENST00000447873 SPATA31A5Q5VU36 1347 aa25.61■■□□□ 1.69
SGCE-207ENST00000447873 SPATA31A7Q8IWB4 1347 aa25.61■■□□□ 1.69
SGCE-207ENST00000447873 ZNF521Q96K83 1311 aa25.61■■□□□ 1.69
SGCE-207ENST00000447873 VPS72Q15906 364 aa25.61■■□□□ 1.69
SGCE-207ENST00000447873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.61■■□□□ 1.692e-6■□□□□ 8.1
SGCE-207ENST00000447873 SPG7Q9UQ90 795 aa25.61■■□□□ 1.69
SGCE-207ENST00000447873 OVOS2A0A0G2JMS6 1433 aa25.6■■□□□ 1.69
SGCE-207ENST00000447873 THRAP3Q9Y2W1 955 aaKnown RBP25.6■■□□□ 1.69
SGCE-207ENST00000447873 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
SGCE-207ENST00000447873 ZNF530Q6P9A1 599 aaPredicted RBP25.59■■□□□ 1.69
SGCE-207ENST00000447873 PKD1L3Q7Z443 1732 aa25.59■■□□□ 1.69
SGCE-207ENST00000447873 CENPBP07199 599 aaPredicted RBP25.58■■□□□ 1.69
SGCE-207ENST00000447873 WNK3Q9BYP7 1800 aa25.58■■□□□ 1.69
SGCE-207ENST00000447873 GOLGA2Q08379 1002 aa25.57■■□□□ 1.68
SGCE-207ENST00000447873 RTF1Q92541 710 aaKnown RBP25.57■■□□□ 1.68
SGCE-207ENST00000447873 MAP3K5Q99683 1374 aa25.57■■□□□ 1.68
SGCE-207ENST00000447873 GNAT3A8MTJ3 354 aa25.56■■□□□ 1.68
SGCE-207ENST00000447873 C1orf141Q5JVX7 400 aa25.56■■□□□ 1.68
SGCE-207ENST00000447873 WDR63Q8IWG1 891 aa25.56■■□□□ 1.68
SGCE-207ENST00000447873 AKAP4Q5JQC9 854 aa25.55■■□□□ 1.68
SGCE-207ENST00000447873 CDCA7Q9BWT1 371 aaPredicted RBP25.55■■□□□ 1.68
SGCE-207ENST00000447873 DISP2A7MBM2 1401 aa25.55■■□□□ 1.68
SGCE-207ENST00000447873 HTATSF1O43719 755 aaKnown RBP25.54■■□□□ 1.68
SGCE-207ENST00000447873 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
SGCE-207ENST00000447873 DCTN1Q14203 1278 aa25.53■■□□□ 1.68
SGCE-207ENST00000447873 MCM10Q7L590 875 aa25.53■■□□□ 1.68
SGCE-207ENST00000447873 CDCA7LQ96GN5 454 aa25.53■■□□□ 1.68
SGCE-207ENST00000447873 CALD1Q05682 793 aaKnown RBP25.52■■□□□ 1.68
SGCE-207ENST00000447873 BARGINQ6ZT62 677 aa25.52■■□□□ 1.68
SGCE-207ENST00000447873 THUMPD2Q9BTF0 503 aaKnown RBP25.52■■□□□ 1.68
SGCE-207ENST00000447873 TRPC5Q9UL62 973 aaPredicted RBP25.52■■□□□ 1.68
SGCE-207ENST00000447873 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
SGCE-207ENST00000447873 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
SGCE-207ENST00000447873 IFNL2Q8IZJ0 200 aa25.51■■□□□ 1.67
SGCE-207ENST00000447873 ATRNO75882 1429 aa25.5■■□□□ 1.67
SGCE-207ENST00000447873 E9PSI1 815 aa25.49■■□□□ 1.67
SGCE-207ENST00000447873 PHKG2P15735 406 aa25.49■■□□□ 1.67
SGCE-207ENST00000447873 GJD4Q96KN9 370 aaPredicted RBP25.49■■□□□ 1.67
SGCE-207ENST00000447873 VIRMAQ69YN4 1812 aaKnown RBP25.49■■□□□ 1.67
SGCE-207ENST00000447873 SHANK3Q9BYB0 1731 aa25.49■■□□□ 1.67
SGCE-207ENST00000447873 IL16Q14005 1332 aa25.49■■□□□ 1.67
SGCE-207ENST00000447873 CYP27B1O15528 508 aa25.48■■□□□ 1.67
SGCE-207ENST00000447873 SLFN5Q08AF3 891 aa25.48■■□□□ 1.67
SGCE-207ENST00000447873 EXOC5O00471 708 aa25.48■■□□□ 1.67
SGCE-207ENST00000447873 FAM98CQ17RN3 349 aaKnown RBP25.48■■□□□ 1.67
SGCE-207ENST00000447873 MPRIPQ6WCQ1 1025 aa25.48■■□□□ 1.67
SGCE-207ENST00000447873 QTRT2Q9H974 415 aaKnown RBP25.48■■□□□ 1.67
SGCE-207ENST00000447873 SPINK5Q9NQ38 1064 aaPredicted RBP25.48■■□□□ 1.67
SGCE-207ENST00000447873 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
SGCE-207ENST00000447873 DDX54Q8TDD1 881 aaKnown RBP25.47■■□□□ 1.67
SGCE-207ENST00000447873 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
SGCE-207ENST00000447873 ZNF772Q68DY9 489 aaPredicted RBP25.46■■□□□ 1.67
SGCE-207ENST00000447873 GLI3P10071 1580 aa25.45■■□□□ 1.67
SGCE-207ENST00000447873 DDB1Q16531 1140 aa25.45■■□□□ 1.66
SGCE-207ENST00000447873 LGR6Q9HBX8 967 aa25.45■■□□□ 1.66
SGCE-207ENST00000447873 MYH16Q9H6N6 1097 aa25.44■■□□□ 1.66
SGCE-207ENST00000447873 LAS1LQ9Y4W2 734 aaKnown RBP25.44■■□□□ 1.66
SGCE-207ENST00000447873 LRRC37A3O60309 1634 aa25.44■■□□□ 1.66
SGCE-207ENST00000447873 TNS2Q63HR2 1409 aa25.44■■□□□ 1.66
SGCE-207ENST00000447873 SCN11AQ9UI33 1791 aa25.43■■□□□ 1.66
SGCE-207ENST00000447873 CEMIPQ8WUJ3 1361 aa25.43■■□□□ 1.66
SGCE-207ENST00000447873 RNMTO43148 476 aaKnown RBP25.43■■□□□ 1.66
SGCE-207ENST00000447873 GNAI1P63096 354 aa25.43■■□□□ 1.66
SGCE-207ENST00000447873 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
SGCE-207ENST00000447873 DCAF5Q96JK2 942 aa25.43■■□□□ 1.66
SGCE-207ENST00000447873 IFT57Q9NWB7 429 aa25.43■■□□□ 1.66
SGCE-207ENST00000447873 A0A0G2JS52 829 aa25.42■■□□□ 1.66
SGCE-207ENST00000447873 MYT1Q01538 1121 aa25.42■■□□□ 1.66
SGCE-207ENST00000447873 DUSP27Q5VZP5 1158 aa25.42■■□□□ 1.66
SGCE-207ENST00000447873 CFAP44Q96MT7 982 aa25.42■■□□□ 1.66
SGCE-207ENST00000447873 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
SGCE-207ENST00000447873 KDM6AO15550 1401 aaPredicted RBP25.41■■□□□ 1.66
SGCE-207ENST00000447873 ZNF853P0CG23 659 aa25.39■■□□□ 1.66
SGCE-207ENST00000447873 TEFQ10587 303 aa25.39■■□□□ 1.66
SGCE-207ENST00000447873 NKX1-1Q15270 411 aaPredicted RBP25.39■■□□□ 1.66
SGCE-207ENST00000447873 THSD7AQ9UPZ6 1657 aa25.39■■□□□ 1.65
SGCE-207ENST00000447873 TSR2Q969E8 191 aaKnown RBP25.39■■□□□ 1.65
SGCE-207ENST00000447873 FANCIQ9NVI1 1328 aa25.38■■□□□ 1.65
SGCE-207ENST00000447873 TAF7Q15545 349 aaPredicted RBP25.38■■□□□ 1.65
SGCE-207ENST00000447873 ONECUT3O60422 494 aaPredicted RBP25.36■■□□□ 1.65
SGCE-207ENST00000447873 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
SGCE-207ENST00000447873 MBIPQ9NS73 344 aa25.36■■□□□ 1.65
SGCE-207ENST00000447873 CHL1O00533 1208 aa25.35■■□□□ 1.65
SGCE-207ENST00000447873 TSPYL4Q9UJ04 414 aa25.35■■□□□ 1.65
SGCE-207ENST00000447873 SIPA1L3O60292 1781 aaPredicted RBP25.34■■□□□ 1.65
SGCE-207ENST00000447873 BABAM1Q9NWV8 329 aa25.34■■□□□ 1.65
SGCE-207ENST00000447873 MIS18AQ9NYP9 233 aa25.34■■□□□ 1.65
SGCE-207ENST00000447873 RBM6P78332 1123 aaKnown RBP25.33■■□□□ 1.65
SGCE-207ENST00000447873 SLC52A2Q9HAB3 445 aa25.33■■□□□ 1.65
SGCE-207ENST00000447873 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms