RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 POLKQ9UBT6 870 aa32.91■■■□□ 2.86
MRPL28-205ENST00000447696 KNSTRNQ9Y448 316 aa32.9■■■□□ 2.86
MRPL28-205ENST00000447696 MAP2P11137 1827 aaKnown RBP32.9■■■□□ 2.86
MRPL28-205ENST00000447696 PPM1GO15355 546 aaPredicted RBP32.89■■■□□ 2.86
MRPL28-205ENST00000447696 RAPGEF4Q8WZA2 1011 aa32.88■■■□□ 2.85
MRPL28-205ENST00000447696 NCAPD2Q15021 1401 aa32.87■■■□□ 2.85
MRPL28-205ENST00000447696 USHBP1Q8N6Y0 703 aa32.87■■■□□ 2.85
MRPL28-205ENST00000447696 ZCRB1Q8TBF4 217 aaKnown RBP32.87■■■□□ 2.85
MRPL28-205ENST00000447696 TNNT2P45379 298 aaPredicted RBP32.85■■■□□ 2.85
MRPL28-205ENST00000447696 DDX54Q8TDD1 881 aaKnown RBP32.85■■■□□ 2.85
MRPL28-205ENST00000447696 SHANK3Q9BYB0 1731 aa32.83■■■□□ 2.85
MRPL28-205ENST00000447696 TATP17735 454 aaPredicted RBP32.83■■■□□ 2.85
MRPL28-205ENST00000447696 MORC1Q86VD1 984 aa32.83■■■□□ 2.85
MRPL28-205ENST00000447696 ANO8Q9HCE9 1232 aaPredicted RBP32.83■■■□□ 2.85
MRPL28-205ENST00000447696 ACSBG1Q96GR2 724 aa32.82■■■□□ 2.84
MRPL28-205ENST00000447696 AMER1Q5JTC6 1135 aaPredicted RBP32.81■■■□□ 2.84
MRPL28-205ENST00000447696 CASZ1Q86V15 1759 aa32.78■■■□□ 2.84
MRPL28-205ENST00000447696 STK32BQ9NY57 414 aa32.77■■■□□ 2.84
MRPL28-205ENST00000447696 PROM2Q8N271 834 aa32.76■■■□□ 2.83
MRPL28-205ENST00000447696 EYA1Q99502 592 aa32.76■■■□□ 2.83
MRPL28-205ENST00000447696 PCDH11XQ9BZA7 1347 aa32.76■■■□□ 2.83
MRPL28-205ENST00000447696 PCDH11YQ9BZA8 1340 aa32.76■■■□□ 2.83
MRPL28-205ENST00000447696 BTAF1O14981 1849 aa32.75■■■□□ 2.83
MRPL28-205ENST00000447696 PER1O15534 1290 aaPredicted RBP32.75■■■□□ 2.83
MRPL28-205ENST00000447696 EIF4A2Q14240 407 aaKnown RBP32.75■■■□□ 2.83
MRPL28-205ENST00000447696 TXNRD1Q16881 649 aa32.74■■■□□ 2.83
MRPL28-205ENST00000447696 ZBTB7AO95365 584 aa32.73■■■□□ 2.83
MRPL28-205ENST00000447696 PKD1L3Q7Z443 1732 aa32.73■■■□□ 2.83
MRPL28-205ENST00000447696 PLEKHG2Q9H7P9 1386 aa32.72■■■□□ 2.83
MRPL28-205ENST00000447696 DOT1LQ8TEK3 1739 aa32.72■■■□□ 2.83
MRPL28-205ENST00000447696 PTGER2P43116 358 aa32.72■■■□□ 2.83
MRPL28-205ENST00000447696 SLC15A2Q16348 729 aa32.71■■■□□ 2.83
MRPL28-205ENST00000447696 NPC1L1Q9UHC9 1359 aa32.69■■■□□ 2.82
MRPL28-205ENST00000447696 PRIM1P49642 420 aaKnown RBP32.68■■■□□ 2.82
MRPL28-205ENST00000447696 PDGFDQ9GZP0 370 aaPredicted RBP32.68■■■□□ 2.82
MRPL28-205ENST00000447696 MTFR1LQ9H019 292 aa32.68■■■□□ 2.82
MRPL28-205ENST00000447696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.68■■■□□ 2.82
MRPL28-205ENST00000447696 IGSF1Q8N6C5 1336 aa32.68■■■□□ 2.82
MRPL28-205ENST00000447696 ZNF784Q8NCA9 323 aaPredicted RBP32.67■■■□□ 2.82
MRPL28-205ENST00000447696 ATF5Q9Y2D1 282 aaPredicted RBP32.67■■■□□ 2.82
MRPL28-205ENST00000447696 SYTL4Q96C24 671 aaPredicted RBP32.66■■■□□ 2.82
MRPL28-205ENST00000447696 SYT17Q9BSW7 474 aa32.66■■■□□ 2.82
MRPL28-205ENST00000447696 SPG7Q9UQ90 795 aa32.66■■■□□ 2.82
MRPL28-205ENST00000447696 KAT6BQ8WYB5 2073 aa32.66■■■□□ 2.82
MRPL28-205ENST00000447696 CYP27B1O15528 508 aa32.65■■■□□ 2.82
MRPL28-205ENST00000447696 FHDC1Q9C0D6 1143 aaPredicted RBP32.63■■■□□ 2.81
MRPL28-205ENST00000447696 PAPPAQ13219 1627 aa32.61■■■□□ 2.81
MRPL28-205ENST00000447696 SLC27A3Q5K4L6 730 aa32.6■■■□□ 2.81
MRPL28-205ENST00000447696 NKX1-1Q15270 411 aaPredicted RBP32.59■■■□□ 2.81
MRPL28-205ENST00000447696 CC2D1BQ5T0F9 858 aaKnown RBP32.59■■■□□ 2.81
MRPL28-205ENST00000447696 SGIP1Q9BQI5 828 aa32.58■■■□□ 2.81
MRPL28-205ENST00000447696 IL13P35225 146 aa32.55■■■□□ 2.8
MRPL28-205ENST00000447696 MTHFSP49914 203 aa32.55■■■□□ 2.8
MRPL28-205ENST00000447696 LRRC4BQ9NT99 713 aa32.55■■■□□ 2.8
MRPL28-205ENST00000447696 MAP3K5Q99683 1374 aa32.55■■■□□ 2.8
MRPL28-205ENST00000447696 LY75O60449 1722 aa32.54■■■□□ 2.8
MRPL28-205ENST00000447696 ARXQ96QS3 562 aa32.54■■■□□ 2.8
MRPL28-205ENST00000447696 TOGARAM1Q9Y4F4 1720 aa32.54■■■□□ 2.8
MRPL28-205ENST00000447696 IFNL2Q8IZJ0 200 aa32.53■■■□□ 2.8
MRPL28-205ENST00000447696 PHKG2P15735 406 aa32.52■■■□□ 2.8
MRPL28-205ENST00000447696 KDRP35968 1356 aa32.52■■■□□ 2.8
MRPL28-205ENST00000447696 UTRNP46939 3433 aa32.51■■■□□ 2.8
MRPL28-205ENST00000447696 AMOTQ4VCS5 1084 aa32.49■■■□□ 2.79
MRPL28-205ENST00000447696 PLEKHO1Q53GL0 409 aaPredicted RBP32.49■■■□□ 2.79
MRPL28-205ENST00000447696 MPRIPQ6WCQ1 1025 aa32.48■■■□□ 2.79
MRPL28-205ENST00000447696 AEBP1Q8IUX7 1158 aa32.48■■■□□ 2.79
MRPL28-205ENST00000447696 C1QTNF8P60827 252 aa32.47■■■□□ 2.79
MRPL28-205ENST00000447696 SULT6B1Q6IMI4 303 aa32.47■■■□□ 2.79
MRPL28-205ENST00000447696 CHD4Q14839 1912 aa32.47■■■□□ 2.79
MRPL28-205ENST00000447696 ITGB4P16144 1822 aa32.47■■■□□ 2.79
MRPL28-205ENST00000447696 CCNL1Q9UK58 526 aaPredicted RBP32.46■■■□□ 2.79
MRPL28-205ENST00000447696 SENP3-EIF4A1A0A087X0R7 540 aa32.45■■■□□ 2.79
MRPL28-205ENST00000447696 ZNF827Q17R98 1081 aa32.45■■■□□ 2.79
MRPL28-205ENST00000447696 SLC16A10Q8TF71 515 aa32.45■■■□□ 2.79
MRPL28-205ENST00000447696 AKT1S1Q96B36 256 aa32.45■■■□□ 2.79
MRPL28-205ENST00000447696 PALLDQ8WX93 1383 aa32.45■■■□□ 2.78
MRPL28-205ENST00000447696 HSP90AB1P08238 724 aaKnown RBP32.44■■■□□ 2.78
MRPL28-205ENST00000447696 SMARCC1Q92922 1105 aaPredicted RBP32.44■■■□□ 2.78
MRPL28-205ENST00000447696 HMGB2P26583 209 aaKnown RBP32.43■■■□□ 2.78
MRPL28-205ENST00000447696 PIGBQ92521 554 aa32.43■■■□□ 2.78
MRPL28-205ENST00000447696 DIAPH1O60610 1272 aaKnown RBP32.42■■■□□ 2.78
MRPL28-205ENST00000447696 ZNF530Q6P9A1 599 aaPredicted RBP32.41■■■□□ 2.78
MRPL28-205ENST00000447696 TMOD3Q9NYL9 352 aa32.41■■■□□ 2.78
MRPL28-205ENST00000447696 COL3A1P02461 1466 aaPredicted RBP32.41■■■□□ 2.78
MRPL28-205ENST00000447696 QSER1Q2KHR3 1735 aa32.4■■■□□ 2.78
MRPL28-205ENST00000447696 KCNQ4P56696 695 aa32.4■■■□□ 2.78
MRPL28-205ENST00000447696 DCAF5Q96JK2 942 aa32.4■■■□□ 2.78
MRPL28-205ENST00000447696 CNGB1Q14028 1251 aaPredicted RBP32.39■■■□□ 2.78
MRPL28-205ENST00000447696 GPR162Q16538 588 aa32.39■■■□□ 2.78
MRPL28-205ENST00000447696 ERVV-2B6SEH9 535 aa32.37■■■□□ 2.77
MRPL28-205ENST00000447696 POLD1P28340 1107 aa32.37■■■□□ 2.77
MRPL28-205ENST00000447696 C1orf141Q5JVX7 400 aa32.36■■■□□ 2.77
MRPL28-205ENST00000447696 KDM6AO15550 1401 aaPredicted RBP32.34■■■□□ 2.77
MRPL28-205ENST00000447696 TFCP2L1Q9NZI6 479 aa32.34■■■□□ 2.77
MRPL28-205ENST00000447696 C5P01031 1676 aa32.34■■■□□ 2.77
MRPL28-205ENST00000447696 PNPLA7Q6ZV29 1317 aa32.32■■■□□ 2.76
MRPL28-205ENST00000447696 HMOX1P09601 288 aa32.31■■■□□ 2.76
MRPL28-205ENST00000447696 CFAP53Q96M91 514 aa32.31■■■□□ 2.76
MRPL28-205ENST00000447696 TUBGCP6Q96RT7 1819 aa32.3■■■□□ 2.76
MRPL28-205ENST00000447696 GIGYF1O75420 1035 aaPredicted RBP32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms