RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PHF14O94880 888 aa19.47■□□□□ 0.71
CNOT3-204ENST00000447684 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
CNOT3-204ENST00000447684 ZNF771Q7L3S4 317 aaPredicted RBP19.47■□□□□ 0.71
CNOT3-204ENST00000447684 CFAP44Q96MT7 982 aa19.47■□□□□ 0.71
CNOT3-204ENST00000447684 CABP2Q9NPB3 220 aa19.47■□□□□ 0.71
CNOT3-204ENST00000447684 REC8O95072 547 aa19.46■□□□□ 0.71
CNOT3-204ENST00000447684 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
CNOT3-204ENST00000447684 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
CNOT3-204ENST00000447684 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
CNOT3-204ENST00000447684 GTF2F1P35269 517 aaKnown RBP eCLIP19.45■□□□□ 0.7
CNOT3-204ENST00000447684 ZNF428Q96B54 188 aa19.45■□□□□ 0.7
CNOT3-204ENST00000447684 LMTK2Q8IWU2 1503 aa19.45■□□□□ 0.7
CNOT3-204ENST00000447684 GLI2P10070 1586 aa19.45■□□□□ 0.7
CNOT3-204ENST00000447684 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
CNOT3-204ENST00000447684 CGNQ9P2M7 1197 aaKnown RBP19.45■□□□□ 0.7
CNOT3-204ENST00000447684 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-204ENST00000447684 PTCH1Q13635 1447 aa19.44■□□□□ 0.7
CNOT3-204ENST00000447684 RIOK3O14730 519 aaKnown RBP19.44■□□□□ 0.7
CNOT3-204ENST00000447684 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
CNOT3-204ENST00000447684 PDE4CQ08493 712 aa19.44■□□□□ 0.7
CNOT3-204ENST00000447684 VAMP4O75379 141 aa19.43■□□□□ 0.7
CNOT3-204ENST00000447684 UHRF1BP1LA0JNW5 1464 aa19.43■□□□□ 0.7
CNOT3-204ENST00000447684 BRD1O95696 1058 aa19.43■□□□□ 0.7
CNOT3-204ENST00000447684 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
CNOT3-204ENST00000447684 ANKRD26Q9UPS8 1709 aa19.43■□□□□ 0.7
CNOT3-204ENST00000447684 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
CNOT3-204ENST00000447684 USP48Q86UV5 1035 aa19.42■□□□□ 0.7
CNOT3-204ENST00000447684 BCL11BQ9C0K0 894 aaPredicted RBP19.42■□□□□ 0.7
CNOT3-204ENST00000447684 ABCA9Q8IUA7 1624 aa19.42■□□□□ 0.7
CNOT3-204ENST00000447684 A0A1W2PP64 1363 aa19.42■□□□□ 0.7
CNOT3-204ENST00000447684 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
CNOT3-204ENST00000447684 ERC2O15083 957 aa19.41■□□□□ 0.7
CNOT3-204ENST00000447684 NUTM2DQ5VT03 806 aaPredicted RBP19.41■□□□□ 0.7
CNOT3-204ENST00000447684 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
CNOT3-204ENST00000447684 FAM184AQ8NB25 1140 aa19.41■□□□□ 0.7
CNOT3-204ENST00000447684 DIAPH3Q9NSV4 1193 aa19.41■□□□□ 0.7
CNOT3-204ENST00000447684 DCTPP1Q9H773 170 aa19.4■□□□□ 0.7
CNOT3-204ENST00000447684 PYCARDQ9ULZ3 195 aa19.39■□□□□ 0.69
CNOT3-204ENST00000447684 HMOX1P09601 288 aa19.38■□□□□ 0.69
CNOT3-204ENST00000447684 ZBTB22O15209 634 aa19.38■□□□□ 0.69
CNOT3-204ENST00000447684 UVSSAQ2YD98 709 aa19.38■□□□□ 0.69
CNOT3-204ENST00000447684 SPTLC3Q9NUV7 552 aa19.38■□□□□ 0.69
CNOT3-204ENST00000447684 VGLL3A8MV65 326 aa19.38■□□□□ 0.69
CNOT3-204ENST00000447684 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
CNOT3-204ENST00000447684 ABCC4O15439 1325 aa19.37■□□□□ 0.69
CNOT3-204ENST00000447684 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
CNOT3-204ENST00000447684 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
CNOT3-204ENST00000447684 TWISTNBQ3B726 338 aaPredicted RBP19.37■□□□□ 0.69
CNOT3-204ENST00000447684 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
CNOT3-204ENST00000447684 UPF3BQ9BZI7 483 aaKnown RBP19.37■□□□□ 0.69
CNOT3-204ENST00000447684 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
CNOT3-204ENST00000447684 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
CNOT3-204ENST00000447684 FBLN1P23142 703 aa19.36■□□□□ 0.69
CNOT3-204ENST00000447684 CCDC183Q5T5S1 534 aa19.36■□□□□ 0.69
CNOT3-204ENST00000447684 API5Q9BZZ5 524 aaKnown RBP19.36■□□□□ 0.69
CNOT3-204ENST00000447684 KDM4AO75164 1064 aa19.35■□□□□ 0.69
CNOT3-204ENST00000447684 CAMSAP1Q5T5Y3 1602 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 ANO2Q9NQ90 1003 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 PALD1Q9ULE6 856 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 CNPY2Q9Y2B0 182 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 NPATQ14207 1427 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
CNOT3-204ENST00000447684 FCHSD2O94868 740 aa19.33■□□□□ 0.69
CNOT3-204ENST00000447684 GIMAP6Q6P9H5 292 aa19.33■□□□□ 0.69
CNOT3-204ENST00000447684 C8orf58Q8NAV2 365 aa19.33■□□□□ 0.69
CNOT3-204ENST00000447684 KIAA1524Q8TCG1 905 aa19.33■□□□□ 0.69
CNOT3-204ENST00000447684 PHACTR3Q96KR7 559 aa19.33■□□□□ 0.69
CNOT3-204ENST00000447684 FYB1O15117 783 aa19.33■□□□□ 0.68
CNOT3-204ENST00000447684 CDK11BP21127 795 aaKnown RBP19.33■□□□□ 0.68
CNOT3-204ENST00000447684 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
CNOT3-204ENST00000447684 KNDC1Q76NI1 1749 aa19.33■□□□□ 0.68
CNOT3-204ENST00000447684 KCNF1Q9H3M0 494 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 FIBPO43427 364 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 MCM2P49736 904 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 ANKRD7Q92527 254 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 TMEM51Q9NW97 253 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 STK26Q9P289 416 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 MCCP23508 829 aa19.32■□□□□ 0.68
CNOT3-204ENST00000447684 GNAI1P63096 354 aa19.31■□□□□ 0.68
CNOT3-204ENST00000447684 ANKRD44Q8N8A2 993 aa19.31■□□□□ 0.68
CNOT3-204ENST00000447684 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
CNOT3-204ENST00000447684 WDR33Q9C0J8 1336 aaKnown RBP19.31■□□□□ 0.68
CNOT3-204ENST00000447684 MX1P20591 662 aa19.31■□□□□ 0.68
CNOT3-204ENST00000447684 CFAP65Q6ZU64 1925 aaKnown RBP19.3■□□□□ 0.68
CNOT3-204ENST00000447684 SRCIN1Q9C0H9 1055 aa19.3■□□□□ 0.68
CNOT3-204ENST00000447684 NAP1L2Q9ULW6 460 aaPredicted RBP19.3■□□□□ 0.68
CNOT3-204ENST00000447684 CUL4AQ13619 759 aa19.3■□□□□ 0.68
CNOT3-204ENST00000447684 C16orf45Q96MC5 204 aaPredicted RBP19.3■□□□□ 0.68
CNOT3-204ENST00000447684 OGFRQ9NZT2 677 aa19.3■□□□□ 0.68
CNOT3-204ENST00000447684 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 RILPL2Q969X0 211 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 TRIM6-TRIM34B2RNG4 842 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 AP5Z1O43299 807 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 DTNBO60941 627 aa19.29■□□□□ 0.68
CNOT3-204ENST00000447684 NAA30Q147X3 362 aaPredicted RBP19.29■□□□□ 0.68
CNOT3-204ENST00000447684 FEZ1Q99689 392 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms