RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 LTV1Q96GA3 475 aaPredicted RBP24.77■■□□□ 1.56
FAM3A-215ENST00000447601 ABCC4O15439 1325 aa24.76■■□□□ 1.55
FAM3A-215ENST00000447601 C8orf34Q49A92 452 aa24.76■■□□□ 1.55
FAM3A-215ENST00000447601 ANP32EQ9BTT0 268 aa24.76■■□□□ 1.55
FAM3A-215ENST00000447601 NCOA3Q9Y6Q9 1424 aa24.75■■□□□ 1.55
FAM3A-215ENST00000447601 KIF1AQ12756 1690 aa24.74■■□□□ 1.55
FAM3A-215ENST00000447601 NPM2Q86SE8 214 aaKnown RBP24.74■■□□□ 1.55
FAM3A-215ENST00000447601 PDZRN3Q9UPQ7 1066 aa24.74■■□□□ 1.55
FAM3A-215ENST00000447601 GNAT3A8MTJ3 354 aa24.73■■□□□ 1.55
FAM3A-215ENST00000447601 SLIT3O75094 1523 aa24.73■■□□□ 1.55
FAM3A-215ENST00000447601 DCCP43146 1447 aa24.73■■□□□ 1.55
FAM3A-215ENST00000447601 PHRF1Q9P1Y6 1649 aaKnown RBP24.73■■□□□ 1.55
FAM3A-215ENST00000447601 TSPYL4Q9UJ04 414 aa24.72■■□□□ 1.55
FAM3A-215ENST00000447601 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
FAM3A-215ENST00000447601 NOP58Q9Y2X3 529 aaKnown RBP24.72■■□□□ 1.55
FAM3A-215ENST00000447601 LTN1O94822 1766 aa24.72■■□□□ 1.55
FAM3A-215ENST00000447601 TMEM94Q12767 1356 aa24.71■■□□□ 1.55
FAM3A-215ENST00000447601 MAP3K5Q99683 1374 aa24.71■■□□□ 1.55
FAM3A-215ENST00000447601 GCP02774 474 aa24.71■■□□□ 1.55
FAM3A-215ENST00000447601 ATF3P18847 181 aa24.71■■□□□ 1.55
FAM3A-215ENST00000447601 XPCQ01831 940 aaPredicted RBP24.71■■□□□ 1.55
FAM3A-215ENST00000447601 USP19O94966 1318 aa24.71■■□□□ 1.55
FAM3A-215ENST00000447601 ZBTB7BO15156 539 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-215ENST00000447601 MST1RQ04912 1400 aa24.69■■□□□ 1.54
FAM3A-215ENST00000447601 KRT24Q2M2I5 525 aa24.69■■□□□ 1.54
FAM3A-215ENST00000447601 ARHGEF25Q86VW2 580 aa24.68■■□□□ 1.54
FAM3A-215ENST00000447601 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
FAM3A-215ENST00000447601 MSH6P52701 1360 aa24.68■■□□□ 1.54
FAM3A-215ENST00000447601 TRPM3Q9HCF6 1732 aaPredicted RBP24.67■■□□□ 1.54
FAM3A-215ENST00000447601 ZBTB7CA1YPR0 619 aa24.67■■□□□ 1.54
FAM3A-215ENST00000447601 LMOD2Q6P5Q4 547 aa24.67■■□□□ 1.54
FAM3A-215ENST00000447601 SMC5Q8IY18 1101 aa24.67■■□□□ 1.54
FAM3A-215ENST00000447601 USHBP1Q8N6Y0 703 aa24.67■■□□□ 1.54
FAM3A-215ENST00000447601 BABAM1Q9NWV8 329 aa24.67■■□□□ 1.54
FAM3A-215ENST00000447601 NBPF6Q5VWK0 638 aa24.66■■□□□ 1.54
FAM3A-215ENST00000447601 NBPF4Q96M43 638 aa24.66■■□□□ 1.54
FAM3A-215ENST00000447601 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-215ENST00000447601 PTPRCP08575 1304 aa24.66■■□□□ 1.54
FAM3A-215ENST00000447601 MIS18AQ9NYP9 233 aa24.65■■□□□ 1.54
FAM3A-215ENST00000447601 SOS1Q07889 1333 aaPredicted RBP24.63■■□□□ 1.53
FAM3A-215ENST00000447601 INTS3Q68E01 1043 aaKnown RBP24.63■■□□□ 1.53
FAM3A-215ENST00000447601 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
FAM3A-215ENST00000447601 DDRGK1Q96HY6 314 aa24.63■■□□□ 1.53
FAM3A-215ENST00000447601 IL17REQ8NFR9 667 aa24.62■■□□□ 1.53
FAM3A-215ENST00000447601 HSPA2P54652 639 aa24.61■■□□□ 1.53
FAM3A-215ENST00000447601 TAF7Q15545 349 aaPredicted RBP24.61■■□□□ 1.53
FAM3A-215ENST00000447601 RGS12O14924 1447 aa24.6■■□□□ 1.53
FAM3A-215ENST00000447601 NCAPD2Q15021 1401 aa24.6■■□□□ 1.53
FAM3A-215ENST00000447601 SLC4A2P04920 1241 aa24.59■■□□□ 1.53
FAM3A-215ENST00000447601 STRCP1A6NGW2 1772 aa24.58■■□□□ 1.53
FAM3A-215ENST00000447601 ANKRD24Q8TF21 1146 aa24.58■■□□□ 1.53
FAM3A-215ENST00000447601 CEMIPQ8WUJ3 1361 aa24.58■■□□□ 1.53
FAM3A-215ENST00000447601 LRRC59Q96AG4 307 aaKnown RBP24.58■■□□□ 1.53
FAM3A-215ENST00000447601 GCC1Q96CN9 775 aa24.58■■□□□ 1.53
FAM3A-215ENST00000447601 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
FAM3A-215ENST00000447601 NUCB1Q02818 461 aa24.57■■□□□ 1.52
FAM3A-215ENST00000447601 AMOTQ4VCS5 1084 aa24.57■■□□□ 1.52
FAM3A-215ENST00000447601 PLEKHO1Q53GL0 409 aaPredicted RBP24.57■■□□□ 1.52
FAM3A-215ENST00000447601 STK31Q9BXU1 1019 aa24.57■■□□□ 1.52
FAM3A-215ENST00000447601 ALS2Q96Q42 1657 aa24.56■■□□□ 1.52
FAM3A-215ENST00000447601 PLEKHG5O94827 1062 aa24.56■■□□□ 1.52
FAM3A-215ENST00000447601 C1orf115Q9H7X2 142 aa24.56■■□□□ 1.52
FAM3A-215ENST00000447601 AKAP4Q5JQC9 854 aa24.55■■□□□ 1.52
FAM3A-215ENST00000447601 CCDC30Q5VVM6 783 aa24.55■■□□□ 1.52
FAM3A-215ENST00000447601 ZNF530Q6P9A1 599 aaPredicted RBP24.52■■□□□ 1.52
FAM3A-215ENST00000447601 CHD1LQ86WJ1 897 aa24.52■■□□□ 1.52
FAM3A-215ENST00000447601 VIRMAQ69YN4 1812 aaKnown RBP24.52■■□□□ 1.52
FAM3A-215ENST00000447601 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
FAM3A-215ENST00000447601 AXIN2Q9Y2T1 843 aa24.51■■□□□ 1.51
FAM3A-215ENST00000447601 CAMTA1Q9Y6Y1 1673 aa24.51■■□□□ 1.51
FAM3A-215ENST00000447601 TNS3Q68CZ2 1445 aa24.5■■□□□ 1.51
FAM3A-215ENST00000447601 SIRT2Q8IXJ6 389 aa24.5■■□□□ 1.51
FAM3A-215ENST00000447601 LMTK3Q96Q04 1460 aa24.5■■□□□ 1.51
FAM3A-215ENST00000447601 ERBB3P21860 1342 aa24.5■■□□□ 1.51
FAM3A-215ENST00000447601 CCT4P50991 539 aaKnown RBP24.49■■□□□ 1.51
FAM3A-215ENST00000447601 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
FAM3A-215ENST00000447601 C1orf141Q5JVX7 400 aa24.49■■□□□ 1.51
FAM3A-215ENST00000447601 OVOS2A0A0G2JMS6 1433 aa24.48■■□□□ 1.51
FAM3A-215ENST00000447601 G2E3Q7L622 706 aa24.48■■□□□ 1.51
FAM3A-215ENST00000447601 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
FAM3A-215ENST00000447601 CHMP4AQ9BY43 222 aa24.48■■□□□ 1.51
FAM3A-215ENST00000447601 LMO7Q8WWI1 1683 aa24.47■■□□□ 1.51
FAM3A-215ENST00000447601 MYT1Q01538 1121 aa24.47■■□□□ 1.51
FAM3A-215ENST00000447601 TEFQ10587 303 aa24.47■■□□□ 1.51
FAM3A-215ENST00000447601 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
FAM3A-215ENST00000447601 UPF2Q9HAU5 1272 aaKnown RBP24.47■■□□□ 1.51
FAM3A-215ENST00000447601 RPAP2Q8IXW5 612 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-215ENST00000447601 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
FAM3A-215ENST00000447601 KDM4FA0A1W2PPD8 638 aa24.46■■□□□ 1.51
FAM3A-215ENST00000447601 HOXB7P09629 217 aa24.46■■□□□ 1.51
FAM3A-215ENST00000447601 FLIIQ13045 1269 aa24.46■■□□□ 1.51
FAM3A-215ENST00000447601 ANKRD45Q5TZF3 282 aa24.46■■□□□ 1.51
FAM3A-215ENST00000447601 PXDNQ92626 1479 aa24.46■■□□□ 1.51
FAM3A-215ENST00000447601 RGPD2P0DJD1 1756 aa24.45■■□□□ 1.51
FAM3A-215ENST00000447601 ANKRD44Q8N8A2 993 aa24.45■■□□□ 1.5
FAM3A-215ENST00000447601 SPATA31A3Q5VYP0 1347 aa24.45■■□□□ 1.5
FAM3A-215ENST00000447601 ATP10DQ9P241 1426 aa24.45■■□□□ 1.5
FAM3A-215ENST00000447601 SEC24BO95487 1268 aa24.45■■□□□ 1.5
FAM3A-215ENST00000447601 FAM208AQ9UK61 1670 aaKnown RBP24.44■■□□□ 1.5
FAM3A-215ENST00000447601 HDGFL1Q5TGJ6 251 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms