RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 USP31Q70CQ4 1352 aa10.21□□□□□ -0.78
LRRC28-203ENST00000447360 KTN1Q86UP2 1357 aaKnown RBP10.21□□□□□ -0.78
LRRC28-203ENST00000447360 QSER1Q2KHR3 1735 aa10.21□□□□□ -0.78
LRRC28-203ENST00000447360 PRIM1P49642 420 aaKnown RBP10.2□□□□□ -0.78
LRRC28-203ENST00000447360 APLP1P51693 650 aa10.2□□□□□ -0.78
LRRC28-203ENST00000447360 KCNQ4P56696 695 aa10.2□□□□□ -0.78
LRRC28-203ENST00000447360 COL23A1Q86Y22 540 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-203ENST00000447360 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
LRRC28-203ENST00000447360 SYTL4Q96C24 671 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-203ENST00000447360 CCNL1Q9UK58 526 aaPredicted RBP10.2□□□□□ -0.78
LRRC28-203ENST00000447360 FKBP8Q14318 412 aa10.19□□□□□ -0.78
LRRC28-203ENST00000447360 FLAD1Q8NFF5 587 aa10.19□□□□□ -0.78
LRRC28-203ENST00000447360 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
LRRC28-203ENST00000447360 RGPD5Q99666 1765 aa10.19□□□□□ -0.78
LRRC28-203ENST00000447360 PCNTO95613 3336 aa10.18□□□□□ -0.78
LRRC28-203ENST00000447360 KIF3CO14782 793 aa10.18□□□□□ -0.78
LRRC28-203ENST00000447360 DNAJC5GQ8N7S2 189 aa10.18□□□□□ -0.78
LRRC28-203ENST00000447360 NSD2O96028 1365 aa10.17□□□□□ -0.78
LRRC28-203ENST00000447360 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
LRRC28-203ENST00000447360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.17□□□□□ -0.78
LRRC28-203ENST00000447360 IP6K1Q92551 441 aa10.17□□□□□ -0.78
LRRC28-203ENST00000447360 USP47Q96K76 1375 aa10.16□□□□□ -0.78
LRRC28-203ENST00000447360 NME9Q86XW9 330 aa10.16□□□□□ -0.78
LRRC28-203ENST00000447360 TOMM70O94826 608 aa10.15□□□□□ -0.78
LRRC28-203ENST00000447360 MYCNP04198 464 aaPredicted RBP10.15□□□□□ -0.78
LRRC28-203ENST00000447360 ZCRB1Q8TBF4 217 aaKnown RBP10.15□□□□□ -0.78
LRRC28-203ENST00000447360 KAT6BQ8WYB5 2073 aa10.14□□□□□ -0.79
LRRC28-203ENST00000447360 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
LRRC28-203ENST00000447360 IGSF1Q8N6C5 1336 aa10.14□□□□□ -0.79
LRRC28-203ENST00000447360 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
LRRC28-203ENST00000447360 HDGFL2Q7Z4V5 671 aaPredicted RBP10.13□□□□□ -0.79
LRRC28-203ENST00000447360 TUBGCP6Q96RT7 1819 aa10.12□□□□□ -0.79
LRRC28-203ENST00000447360 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
LRRC28-203ENST00000447360 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
LRRC28-203ENST00000447360 LY75O60449 1722 aa10.12□□□□□ -0.79
LRRC28-203ENST00000447360 EDC4Q6P2E9 1401 aaKnown RBP10.11□□□□□ -0.79
LRRC28-203ENST00000447360 USP54Q70EL1 1684 aa10.11□□□□□ -0.79
LRRC28-203ENST00000447360 CD163L1Q9NR16 1453 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-203ENST00000447360 JMYQ8N9B5 988 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 TMC1Q8TDI8 760 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 AK7Q96M32 723 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
LRRC28-203ENST00000447360 ROCK2O75116 1388 aaKnown RBP10.1□□□□□ -0.79
LRRC28-203ENST00000447360 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 HOXC9P31274 260 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
LRRC28-203ENST00000447360 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-203ENST00000447360 KLRG1Q96E93 195 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 MON2Q7Z3U7 1717 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 PALLDQ8WX93 1383 aa10.09□□□□□ -0.79
LRRC28-203ENST00000447360 MAP3K19Q56UN5 1328 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.08□□□□□ -0.8
LRRC28-203ENST00000447360 SSFA2P28290 1259 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 AMPHP49418 695 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 PRELPP51888 382 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 RAPGEF4Q8WZA2 1011 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 LTN1O94822 1766 aa10.08□□□□□ -0.8
LRRC28-203ENST00000447360 MEGF6O75095 1541 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 DOT1LQ8TEK3 1739 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 TGFB2P61812 414 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 FSTL1Q12841 308 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 COG3Q96JB2 828 aa10.07□□□□□ -0.8
LRRC28-203ENST00000447360 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
LRRC28-203ENST00000447360 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
LRRC28-203ENST00000447360 FAM208AQ9UK61 1670 aaKnown RBP10.06□□□□□ -0.8
LRRC28-203ENST00000447360 A0A1W2PP64 1363 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 PHF14O94880 888 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 TATP17735 454 aaPredicted RBP10.06□□□□□ -0.8
LRRC28-203ENST00000447360 NBPF6Q5VWK0 638 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 MPRIPQ6WCQ1 1025 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 TNS4Q8IZW8 715 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 NBPF4Q96M43 638 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 NMRK2Q9NPI5 230 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
LRRC28-203ENST00000447360 CAPN15O75808 1086 aa10.05□□□□□ -0.8
LRRC28-203ENST00000447360 C16orf71Q8IYS4 520 aaPredicted RBP10.05□□□□□ -0.8
LRRC28-203ENST00000447360 C5P01031 1676 aa10.05□□□□□ -0.8
LRRC28-203ENST00000447360 RTL1A6NKG5 1358 aa10.04□□□□□ -0.8
LRRC28-203ENST00000447360 ARHGAP27Q6ZUM4 889 aa10.04□□□□□ -0.8
LRRC28-203ENST00000447360 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
LRRC28-203ENST00000447360 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
LRRC28-203ENST00000447360 LOC102724428A0A0B4J2F2 783 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 CYP27B1O15528 508 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 MMP10P09238 476 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 FBLN1P23142 703 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 SIK1P57059 783 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 HTRA3P83110 453 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 SMIM5Q71RC9 77 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
LRRC28-203ENST00000447360 USHBP1Q8N6Y0 703 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 PIGBQ92521 554 aa10.03□□□□□ -0.8
LRRC28-203ENST00000447360 PLEKHG2Q9H7P9 1386 aa10.02□□□□□ -0.8
LRRC28-203ENST00000447360 C4BP0C0L5 1744 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms