RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 INSRP06213 1382 aa25.3■■□□□ 1.64
COL9A1-205ENST00000447041 ANKRD26Q9UPS8 1709 aa25.29■■□□□ 1.64
COL9A1-205ENST00000447041 ZBTB7AO95365 584 aa25.29■■□□□ 1.64
COL9A1-205ENST00000447041 ZCRB1Q8TBF4 217 aaKnown RBP25.28■■□□□ 1.64
COL9A1-205ENST00000447041 EMILIN1Q9Y6C2 1016 aa25.27■■□□□ 1.64
COL9A1-205ENST00000447041 KIF24Q5T7B8 1368 aa25.27■■□□□ 1.64
COL9A1-205ENST00000447041 POLR3GLQ9BT43 218 aa25.26■■□□□ 1.63
COL9A1-205ENST00000447041 LRRC4BQ9NT99 713 aa25.26■■□□□ 1.63
COL9A1-205ENST00000447041 NSD2O96028 1365 aa25.26■■□□□ 1.63
COL9A1-205ENST00000447041 SYTL4Q96C24 671 aaPredicted RBP25.25■■□□□ 1.63
COL9A1-205ENST00000447041 LY75O60449 1722 aa25.24■■□□□ 1.63
COL9A1-205ENST00000447041 CCER1Q8TC90 406 aaPredicted RBP25.24■■□□□ 1.63
COL9A1-205ENST00000447041 PRIM1P49642 420 aaKnown RBP25.23■■□□□ 1.63
COL9A1-205ENST00000447041 ZNF827Q17R98 1081 aa25.23■■□□□ 1.63
COL9A1-205ENST00000447041 RAPGEF4Q8WZA2 1011 aa25.23■■□□□ 1.63
COL9A1-205ENST00000447041 ATF5Q9Y2D1 282 aaPredicted RBP25.23■■□□□ 1.63
COL9A1-205ENST00000447041 CGNL1Q0VF96 1302 aa25.22■■□□□ 1.63
COL9A1-205ENST00000447041 PTGER2P43116 358 aa25.22■■□□□ 1.63
COL9A1-205ENST00000447041 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
COL9A1-205ENST00000447041 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.63
COL9A1-205ENST00000447041 MAP2P11137 1827 aaKnown RBP25.21■■□□□ 1.63
COL9A1-205ENST00000447041 TATP17735 454 aaPredicted RBP25.2■■□□□ 1.62
COL9A1-205ENST00000447041 TUBGCP6Q96RT7 1819 aa25.2■■□□□ 1.62
COL9A1-205ENST00000447041 QSER1Q2KHR3 1735 aa25.19■■□□□ 1.62
COL9A1-205ENST00000447041 PKD1L3Q7Z443 1732 aa25.19■■□□□ 1.62
COL9A1-205ENST00000447041 PPM1GO15355 546 aaPredicted RBP25.18■■□□□ 1.62
COL9A1-205ENST00000447041 MTFR1LQ9H019 292 aa25.18■■□□□ 1.62
COL9A1-205ENST00000447041 NCAPD2Q15021 1401 aa25.18■■□□□ 1.62
COL9A1-205ENST00000447041 TOGARAM1Q9Y4F4 1720 aa25.17■■□□□ 1.62
COL9A1-205ENST00000447041 KCNQ4P56696 695 aa25.17■■□□□ 1.62
COL9A1-205ENST00000447041 SLC27A3Q5K4L6 730 aa25.17■■□□□ 1.62
COL9A1-205ENST00000447041 PCDH11XQ9BZA7 1347 aa25.16■■□□□ 1.62
COL9A1-205ENST00000447041 PCDH11YQ9BZA8 1340 aa25.16■■□□□ 1.62
COL9A1-205ENST00000447041 AKT1S1Q96B36 256 aa25.16■■□□□ 1.62
COL9A1-205ENST00000447041 SGIP1Q9BQI5 828 aa25.15■■□□□ 1.62
COL9A1-205ENST00000447041 WASHC2AQ641Q2 1341 aa25.13■■□□□ 1.61
COL9A1-205ENST00000447041 POLKQ9UBT6 870 aa25.12■■□□□ 1.61
COL9A1-205ENST00000447041 CYP27B1O15528 508 aa25.11■■□□□ 1.61
COL9A1-205ENST00000447041 TNNT2P45379 298 aaPredicted RBP25.11■■□□□ 1.61
COL9A1-205ENST00000447041 PNPLA7Q6ZV29 1317 aa25.11■■□□□ 1.61
COL9A1-205ENST00000447041 ITGB4P16144 1822 aa25.1■■□□□ 1.61
COL9A1-205ENST00000447041 CCNL1Q9UK58 526 aaPredicted RBP25.1■■□□□ 1.61
COL9A1-205ENST00000447041 EYA1Q99502 592 aa25.09■■□□□ 1.61
COL9A1-205ENST00000447041 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
COL9A1-205ENST00000447041 PANK3Q9H999 370 aa25.09■■□□□ 1.61
COL9A1-205ENST00000447041 C5P01031 1676 aa25.09■■□□□ 1.61
COL9A1-205ENST00000447041 COL24A1Q17RW2 1714 aa25.08■■□□□ 1.61
COL9A1-205ENST00000447041 TFCP2L1Q9NZI6 479 aa25.07■■□□□ 1.6
COL9A1-205ENST00000447041 EIF4A2Q14240 407 aaKnown RBP25.05■■□□□ 1.6
COL9A1-205ENST00000447041 MPRIPQ6WCQ1 1025 aa25.05■■□□□ 1.6
COL9A1-205ENST00000447041 ARXQ96QS3 562 aa25.05■■□□□ 1.6
COL9A1-205ENST00000447041 SYT17Q9BSW7 474 aa25.05■■□□□ 1.6
COL9A1-205ENST00000447041 TAF1LQ8IZX4 1826 aa25.05■■□□□ 1.6
COL9A1-205ENST00000447041 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
COL9A1-205ENST00000447041 DCAF8L1A6NGE4 600 aa25.04■■□□□ 1.6
COL9A1-205ENST00000447041 YY1P25490 414 aa25.02■■□□□ 1.6
COL9A1-205ENST00000447041 SLC16A10Q8TF71 515 aa25.02■■□□□ 1.6
COL9A1-205ENST00000447041 SPG7Q9UQ90 795 aa25.02■■□□□ 1.6
COL9A1-205ENST00000447041 UTRNP46939 3433 aa25.01■■□□□ 1.59
COL9A1-205ENST00000447041 NKX1-1Q15270 411 aaPredicted RBP25■■□□□ 1.59
COL9A1-205ENST00000447041 MAP3K5Q99683 1374 aa24.99■■□□□ 1.59
COL9A1-205ENST00000447041 IGSF1Q8N6C5 1336 aa24.98■■□□□ 1.59
COL9A1-205ENST00000447041 PIGBQ92521 554 aa24.98■■□□□ 1.59
COL9A1-205ENST00000447041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.98■■□□□ 1.59
COL9A1-205ENST00000447041 C4BP0C0L5 1744 aa24.98■■□□□ 1.59
COL9A1-205ENST00000447041 PHKG2P15735 406 aa24.96■■□□□ 1.59
COL9A1-205ENST00000447041 POLD1P28340 1107 aa24.96■■□□□ 1.59
COL9A1-205ENST00000447041 COL23A1Q86Y22 540 aaPredicted RBP24.96■■□□□ 1.59
COL9A1-205ENST00000447041 MSH5O43196 834 aa24.95■■□□□ 1.58
COL9A1-205ENST00000447041 MORC1Q86VD1 984 aa24.95■■□□□ 1.58
COL9A1-205ENST00000447041 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.58
COL9A1-205ENST00000447041 KIF7Q2M1P5 1343 aa24.94■■□□□ 1.58
COL9A1-205ENST00000447041 KLHL34Q8N239 644 aa24.94■■□□□ 1.58
COL9A1-205ENST00000447041 SMARCC1Q92922 1105 aaPredicted RBP24.94■■□□□ 1.58
COL9A1-205ENST00000447041 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
COL9A1-205ENST00000447041 KNSTRNQ9Y448 316 aa24.93■■□□□ 1.58
COL9A1-205ENST00000447041 TMOD3Q9NYL9 352 aa24.92■■□□□ 1.58
COL9A1-205ENST00000447041 UBR3Q6ZT12 1888 aa24.92■■□□□ 1.58
COL9A1-205ENST00000447041 MSL1Q68DK7 614 aa24.9■■□□□ 1.58
COL9A1-205ENST00000447041 ASAP1Q9ULH1 1129 aa24.89■■□□□ 1.58
COL9A1-205ENST00000447041 AMER1Q5JTC6 1135 aaPredicted RBP24.88■■□□□ 1.57
COL9A1-205ENST00000447041 AMIGO3Q86WK7 504 aa24.88■■□□□ 1.57
COL9A1-205ENST00000447041 AEBP1Q8IUX7 1158 aa24.88■■□□□ 1.57
COL9A1-205ENST00000447041 AK7Q96M32 723 aa24.88■■□□□ 1.57
COL9A1-205ENST00000447041 LOC102724428A0A0B4J2F2 783 aa24.87■■□□□ 1.57
COL9A1-205ENST00000447041 SIK1P57059 783 aa24.87■■□□□ 1.57
COL9A1-205ENST00000447041 LINC00116Q8NCU8 138 aa24.86■■□□□ 1.57
COL9A1-205ENST00000447041 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
COL9A1-205ENST00000447041 KDM6AO15550 1401 aaPredicted RBP24.86■■□□□ 1.57
COL9A1-205ENST00000447041 HMGB2P26583 209 aaKnown RBP24.85■■□□□ 1.57
COL9A1-205ENST00000447041 SMIM5Q71RC9 77 aa24.85■■□□□ 1.57
COL9A1-205ENST00000447041 PHF14O94880 888 aa24.84■■□□□ 1.57
COL9A1-205ENST00000447041 PLEKHO1Q53GL0 409 aaPredicted RBP24.84■■□□□ 1.57
COL9A1-205ENST00000447041 FLAD1Q8NFF5 587 aa24.84■■□□□ 1.57
COL9A1-205ENST00000447041 ATG3Q9NT62 314 aa24.84■■□□□ 1.57
COL9A1-205ENST00000447041 CHD4Q14839 1912 aa24.84■■□□□ 1.57
COL9A1-205ENST00000447041 ITPK1Q13572 414 aa24.83■■□□□ 1.57
COL9A1-205ENST00000447041 ZNF530Q6P9A1 599 aaPredicted RBP24.83■■□□□ 1.57
COL9A1-205ENST00000447041 GOLGB1Q14789 3259 aaKnown RBP24.83■■□□□ 1.56
COL9A1-205ENST00000447041 KDRP35968 1356 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms