RNA–Protein interactions for RNA: ENST00000447032.1

RBM17-206, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-206	ENST00000447032	EP400	Q96L91	3159 aa		10.18	□□□□□ -0.78
RBM17-206	ENST00000447032	MEGF6	O75095	1541 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	SLIT2	O94813	1529 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	NEFM	P07197	916 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	CSB-PGBD3	P0DP91	1061 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	TMPO	P42166	694 aa	Known RBP	10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	NGEF	Q8N5V2	710 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	NLRP2	Q9NX02	1062 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	BTG4	Q9NY30	223 aa		10.17	□□□□□ -0.78
RBM17-206	ENST00000447032	CRB1	P82279	1406 aa		10.16	□□□□□ -0.78
RBM17-206	ENST00000447032	SIPA1L3	O60292	1781 aa	Predicted RBP	10.16	□□□□□ -0.78
RBM17-206	ENST00000447032	ADAMTS7	Q9UKP4	1686 aa		10.16	□□□□□ -0.78
RBM17-206	ENST00000447032	NEUROD2	Q15784	382 aa		10.16	□□□□□ -0.78
RBM17-206	ENST00000447032	NFE2L2	Q16236	605 aa		10.16	□□□□□ -0.78
RBM17-206	ENST00000447032	CCDC27	Q2M243	656 aa		10.15	□□□□□ -0.78
RBM17-206	ENST00000447032	NCBP3	Q53F19	620 aa	Known RBP	10.15	□□□□□ -0.78
RBM17-206	ENST00000447032	LARP1	Q6PKG0	1096 aa	Known RBP	10.15	□□□□□ -0.78
RBM17-206	ENST00000447032	WWC1	Q8IX03	1113 aa		10.15	□□□□□ -0.78
RBM17-206	ENST00000447032	STRN4	Q9NRL3	753 aa		10.15	□□□□□ -0.78
RBM17-206	ENST00000447032	ATRN	O75882	1429 aa		10.15	□□□□□ -0.79
RBM17-206	ENST00000447032	PLEKHG2	Q9H7P9	1386 aa		10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	RIPK4	P57078	832 aa		10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	MTHFSD	Q2M296	383 aa	Known RBP	10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	TOM1L2	Q6ZVM7	507 aa		10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	TRIM35	Q9UPQ4	493 aa		10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	OVOS2	A0A0G2JMS6	1433 aa		10.14	□□□□□ -0.79
RBM17-206	ENST00000447032	EVA1C	P58658	441 aa		10.13	□□□□□ -0.79
RBM17-206	ENST00000447032	PDE3B	Q13370	1112 aa		10.13	□□□□□ -0.79
RBM17-206	ENST00000447032	CDCA7L	Q96GN5	454 aa		10.13	□□□□□ -0.79
RBM17-206	ENST00000447032	CARD10	Q9BWT7	1032 aa		10.13	□□□□□ -0.79
RBM17-206	ENST00000447032	MAP3K5	Q99683	1374 aa		10.13	□□□□□ -0.79
RBM17-206	ENST00000447032	BCL9L	Q86UU0	1499 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	KDM3B	Q7LBC6	1761 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	KAT6B	Q8WYB5	2073 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	GOLGA2	Q08379	1002 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	SF3B2	Q13435	895 aa	Known RBP	10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	UNC5CL	Q8IV45	518 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	GAS2L2	Q8NHY3	880 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	RAPGEF4	Q8WZA2	1011 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	DISP2	A7MBM2	1401 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	TOGARAM1	Q9Y4F4	1720 aa		10.12	□□□□□ -0.79
RBM17-206	ENST00000447032	LMOD3	Q0VAK6	560 aa		10.11	□□□□□ -0.79
RBM17-206	ENST00000447032	WDR63	Q8IWG1	891 aa		10.11	□□□□□ -0.79
RBM17-206	ENST00000447032	THUMPD2	Q9BTF0	503 aa	Known RBP	10.11	□□□□□ -0.79
RBM17-206	ENST00000447032	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.11	□□□□□ -0.79
RBM17-206	ENST00000447032	ITGB4	P16144	1822 aa		10.11	□□□□□ -0.79
RBM17-206	ENST00000447032	GLI3	P10071	1580 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	THSD7A	Q9UPZ6	1657 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	TAT	P17735	454 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	SLFN5	Q08AF3	891 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	AMOT	Q4VCS5	1084 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	GJD4	Q96KN9	370 aa	Predicted RBP	10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	USP35	Q9P2H5	1018 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	DOT1L	Q8TEK3	1739 aa		10.1	□□□□□ -0.79
RBM17-206	ENST00000447032	SPATA31A1	Q5TZJ5	1347 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	SPATA31A5	Q5VU36	1347 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	SPATA31A7	Q8IWB4	1347 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032		E9PSI1	815 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	ONECUT3	O60422	494 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	IL2RB	P14784	551 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	DCTN1	Q14203	1278 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	PPP4R3CP	Q6ZMV5	832 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	MCM10	Q7L590	875 aa		10.09	□□□□□ -0.79
RBM17-206	ENST00000447032	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.09	□□□□□ -0.79	1e-6	■■■□□ 18.2
RBM17-206	ENST00000447032	IL16	Q14005	1332 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	GNAT3	A8MTJ3	354 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	VPS72	Q15906	364 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	DUSP27	Q5VZP5	1158 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	TRMT2A	Q8IZ69	625 aa	Known RBP	10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	SPG7	Q9UQ90	795 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	CEMIP	Q8WUJ3	1361 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	MRC1	P22897	1456 aa		10.08	□□□□□ -0.8
RBM17-206	ENST00000447032	KDM6A	O15550	1401 aa	Predicted RBP	10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	TNS2	Q63HR2	1409 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	PAPPA	Q13219	1627 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	HTATSF1	O43719	755 aa	Known RBP	10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	CALD1	Q05682	793 aa	Known RBP	10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	AKAP4	Q5JQC9	854 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	C1orf141	Q5JVX7	400 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	RTF1	Q92541	710 aa	Known RBP	10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	BRWD3	Q6RI45	1802 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	LRP5	O75197	1615 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	PCDH11X	Q9BZA7	1347 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	PCDH11Y	Q9BZA8	1340 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	FANCI	Q9NVI1	1328 aa		10.07	□□□□□ -0.8
RBM17-206	ENST00000447032	CACNA1F	O60840	1977 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	UBR2	Q8IWV8	1755 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	CYP27B1	O15528	508 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	DEFB132	Q7Z7B7	95 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	IL17RE	Q8NFR9	667 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	TSR2	Q969E8	191 aa	Known RBP	10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	MYH16	Q9H6N6	1097 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	IFT57	Q9NWB7	429 aa		10.06	□□□□□ -0.8
RBM17-206	ENST00000447032	ZNF853	P0CG23	659 aa		10.05	□□□□□ -0.8
RBM17-206	ENST00000447032	PHKG2	P15735	406 aa		10.05	□□□□□ -0.8
RBM17-206	ENST00000447032	MPRIP	Q6WCQ1	1025 aa		10.05	□□□□□ -0.8
RBM17-206	ENST00000447032	ZCRB1	Q8TBF4	217 aa	Known RBP	10.05	□□□□□ -0.8
RBM17-206	ENST00000447032	THRAP3	Q9Y2W1	955 aa	Known RBP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms