RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 BLOC1S6Q9UL45 172 aa10.35□□□□□ -0.75
MCF2L2-203ENST00000447025 MORC2Q9Y6X9 1032 aaPredicted RBP10.35□□□□□ -0.75
MCF2L2-203ENST00000447025 TOPBP1Q92547 1522 aa10.35□□□□□ -0.75
MCF2L2-203ENST00000447025 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
MCF2L2-203ENST00000447025 MYBL2P10244 700 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 MCTP2Q6DN12 878 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 MORC4Q8TE76 937 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 UTP6Q9NYH9 597 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 MAP4K4O95819 1239 aaPredicted RBP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 ALDH1B1P30837 517 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 CYP2C19P33261 490 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 PHC3Q8NDX5 983 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 SIN3AQ96ST3 1273 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 POLKQ9UBT6 870 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 ZKSCAN5Q9Y2L8 839 aa10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
MCF2L2-203ENST00000447025 MYO1CO00159 1063 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 CREB3O43889 395 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 RWDD2BP57060 319 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 KIAA2012Q0VF49 1180 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 IQCF2Q8IXL9 164 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 CCDC26Q8TAB7 109 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 CPSF2Q9P2I0 782 aaKnown RBP10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 TRAK2O60296 914 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 COPB2P35606 906 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 MCM6Q14566 821 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 NCAPG2Q86XI2 1143 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 TDRD7Q8NHU6 1098 aaKnown RBP10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 C17orf50Q8WW18 174 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 DDX41Q9UJV9 622 aaKnown RBP10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 CTDP1Q9Y5B0 961 aaPredicted RBP10.33□□□□□ -0.76
MCF2L2-203ENST00000447025 MCM4P33991 863 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 TRPC1P48995 793 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 APLP1P51693 650 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 FAXDC2Q96IV6 333 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 PDZRN3Q9UPQ7 1066 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 POLA1P09884 1462 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 ANKRD62A6NC57 917 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 TMCO5BA8MYB1 307 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 CAPN15O75808 1086 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 IGHDP01880 384 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 IMPDH2P12268 514 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 PSMD2Q13200 908 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 PDCD2Q16342 344 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 SMCR8Q8TEV9 937 aaPredicted RBP10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
MCF2L2-203ENST00000447025 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 TTC31Q49AM3 519 aaPredicted RBP10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 AGBL1Q96MI9 1066 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 SH3GL3Q99963 347 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 POLR3CQ9BUI4 534 aaPredicted RBP10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 RETREG1Q9H6L5 497 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 METTL14Q9HCE5 456 aaKnown RBP10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 CDKL5O76039 1030 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 NAIF1Q69YI7 327 aaPredicted RBP10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 NFXL1Q6ZNB6 911 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 SAMD3Q8N6K7 520 aa10.31□□□□□ -0.76
MCF2L2-203ENST00000447025 U2AF1L5P0DN76 240 aaPredicted RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 NAT2P11245 290 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 U2AF1Q01081 240 aaKnown RBP eCLIP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 DDX10Q13206 875 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 SLC5A9Q2M3M2 681 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 KLHL10Q6JEL2 608 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 C10orf67Q8IYJ2 551 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 THOC1Q96FV9 657 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 TIMM44O43615 452 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 FMNL3Q8IVF7 1028 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 RBM12BQ8IXT5 1001 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 EFCAB13Q8IY85 973 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 ELOA2Q8IYF1 753 aaPredicted RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 RPUSD2Q8IZ73 545 aaKnown RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 CCDC82Q8N4S0 544 aa10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
MCF2L2-203ENST00000447025 IBTKQ9P2D0 1353 aaPredicted RBP10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 C21orf2O43822 256 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 BDNFP23560 247 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 VASPP50552 380 aaPredicted RBP10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 NOM1Q5C9Z4 860 aaKnown RBP10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 JADE2Q9NQC1 790 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 ZNF446Q9NWS9 450 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 CTNNA3Q9UI47 895 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 DNMBPQ6XZF7 1577 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 KIF5CO60282 957 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 KCNA1Q09470 495 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 E2F5Q15329 346 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 CCDC178Q5BJE1 867 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 KCNV1Q6PIU1 500 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 KRT222Q8N1A0 295 aa10.29□□□□□ -0.76
MCF2L2-203ENST00000447025 ANTXR1Q9H6X2 564 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms