RNA–Protein interactions for RNA: ENST00000446039.2

RPL35P4-201, Transcript of ribosomal protein L35 pseudogene 4, humanhuman

BASIC

Gene RPL35P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P4-201ENST00000446039 KCNH5Q8NCM2 988 aa12.33□□□□□ -0.44
RPL35P4-201ENST00000446039 DDX54Q8TDD1 881 aaKnown RBP12.33□□□□□ -0.44
RPL35P4-201ENST00000446039 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
RPL35P4-201ENST00000446039 LTN1O94822 1766 aa12.32□□□□□ -0.44
RPL35P4-201ENST00000446039 C5P01031 1676 aa12.32□□□□□ -0.44
RPL35P4-201ENST00000446039 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
RPL35P4-201ENST00000446039 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
RPL35P4-201ENST00000446039 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
RPL35P4-201ENST00000446039 ERBB3P21860 1342 aa12.3□□□□□ -0.44
RPL35P4-201ENST00000446039 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
RPL35P4-201ENST00000446039 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
RPL35P4-201ENST00000446039 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
RPL35P4-201ENST00000446039 RBM46Q8TBY0 533 aaKnown RBP12.29□□□□□ -0.44
RPL35P4-201ENST00000446039 NSD2O96028 1365 aa12.29□□□□□ -0.44
RPL35P4-201ENST00000446039 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
RPL35P4-201ENST00000446039 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
RPL35P4-201ENST00000446039 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
RPL35P4-201ENST00000446039 ANKRD24Q8TF21 1146 aa12.27□□□□□ -0.45
RPL35P4-201ENST00000446039 ANKRD36BQ8N2N9 1353 aa12.27□□□□□ -0.45
RPL35P4-201ENST00000446039 CENPJQ9HC77 1338 aaPredicted RBP12.26□□□□□ -0.45
RPL35P4-201ENST00000446039 SMIM5Q71RC9 77 aa12.25□□□□□ -0.45
RPL35P4-201ENST00000446039 USP47Q96K76 1375 aa12.25□□□□□ -0.45
RPL35P4-201ENST00000446039 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
RPL35P4-201ENST00000446039 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
RPL35P4-201ENST00000446039 PHF14O94880 888 aa12.24□□□□□ -0.45
RPL35P4-201ENST00000446039 FSTL1Q12841 308 aa12.24□□□□□ -0.45
RPL35P4-201ENST00000446039 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
RPL35P4-201ENST00000446039 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
RPL35P4-201ENST00000446039 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
RPL35P4-201ENST00000446039 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 KCPQ6ZWJ8 1503 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 UBR3Q6ZT12 1888 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
RPL35P4-201ENST00000446039 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
RPL35P4-201ENST00000446039 LTV1Q96GA3 475 aaPredicted RBP12.22□□□□□ -0.45
RPL35P4-201ENST00000446039 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
RPL35P4-201ENST00000446039 RGPD2P0DJD1 1756 aa12.22□□□□□ -0.45
RPL35P4-201ENST00000446039 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
RPL35P4-201ENST00000446039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.21□□□□□ -0.45
RPL35P4-201ENST00000446039 AK7Q96M32 723 aa12.21□□□□□ -0.45
RPL35P4-201ENST00000446039 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
RPL35P4-201ENST00000446039 FAM208AQ9UK61 1670 aaKnown RBP12.21□□□□□ -0.45
RPL35P4-201ENST00000446039 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 KTN1Q86UP2 1357 aaKnown RBP12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 TNRC6CQ9HCJ0 1690 aaKnown RBP12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
RPL35P4-201ENST00000446039 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
RPL35P4-201ENST00000446039 A0A0G2JLW4 131 aa12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 NME9Q86XW9 330 aa12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 ZCRB1Q8TBF4 217 aaKnown RBP12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
RPL35P4-201ENST00000446039 EVC2Q86UK5 1308 aa12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 BRCA1P38398 1863 aaKnown RBP12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 FCHSD2O94868 740 aa12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 SMC1BQ8NDV3 1235 aa12.17□□□□□ -0.46
RPL35P4-201ENST00000446039 MEGF6O75095 1541 aa12.16□□□□□ -0.46
RPL35P4-201ENST00000446039 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
RPL35P4-201ENST00000446039 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
RPL35P4-201ENST00000446039 MMP10P09238 476 aa12.15□□□□□ -0.46
RPL35P4-201ENST00000446039 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
RPL35P4-201ENST00000446039 USP31Q70CQ4 1352 aa12.15□□□□□ -0.46
RPL35P4-201ENST00000446039 ITGB4P16144 1822 aa12.14□□□□□ -0.47
RPL35P4-201ENST00000446039 C10orf71Q711Q0 1435 aa12.14□□□□□ -0.47
RPL35P4-201ENST00000446039 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
RPL35P4-201ENST00000446039 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
RPL35P4-201ENST00000446039 SBF1O95248 1867 aa12.13□□□□□ -0.47
RPL35P4-201ENST00000446039 DPEP1P16444 411 aa12.13□□□□□ -0.47
RPL35P4-201ENST00000446039 TGFB2P61812 414 aa12.13□□□□□ -0.47
RPL35P4-201ENST00000446039 SSFA2P28290 1259 aa12.12□□□□□ -0.47
RPL35P4-201ENST00000446039 IP6K1Q92551 441 aa12.12□□□□□ -0.47
RPL35P4-201ENST00000446039 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
RPL35P4-201ENST00000446039 FOXN1O15353 648 aa12.11□□□□□ -0.47
RPL35P4-201ENST00000446039 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
RPL35P4-201ENST00000446039 GNPATO15228 680 aa12.1□□□□□ -0.47
RPL35P4-201ENST00000446039 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
RPL35P4-201ENST00000446039 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
RPL35P4-201ENST00000446039 L3MBTL2Q969R5 705 aa12.1□□□□□ -0.47
RPL35P4-201ENST00000446039 MKRN1Q9UHC7 482 aaKnown RBP12.1□□□□□ -0.47
RPL35P4-201ENST00000446039 MAP2P11137 1827 aaKnown RBP12.09□□□□□ -0.47
RPL35P4-201ENST00000446039 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
RPL35P4-201ENST00000446039 SBNO2Q9Y2G9 1366 aa12.09□□□□□ -0.47
RPL35P4-201ENST00000446039 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
RPL35P4-201ENST00000446039 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
RPL35P4-201ENST00000446039 CLSPNQ9HAW4 1339 aa12.08□□□□□ -0.48
RPL35P4-201ENST00000446039 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
RPL35P4-201ENST00000446039 KCNA3P22001 575 aa12.07□□□□□ -0.48
RPL35P4-201ENST00000446039 HOXC9P31274 260 aa12.07□□□□□ -0.48
RPL35P4-201ENST00000446039 AMPHP49418 695 aa12.07□□□□□ -0.48
RPL35P4-201ENST00000446039 RAPGEF4Q8WZA2 1011 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms