RNA–Protein interactions for RNA: ENST00000445983.5

CITED1-207, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CITED1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-207ENST00000445983 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
CITED1-207ENST00000445983 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
CITED1-207ENST00000445983 CRB1P82279 1406 aa17.12■□□□□ 0.33
CITED1-207ENST00000445983 NCAPD2Q15021 1401 aa17.12■□□□□ 0.33
CITED1-207ENST00000445983 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
CITED1-207ENST00000445983 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
CITED1-207ENST00000445983 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
CITED1-207ENST00000445983 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
CITED1-207ENST00000445983 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
CITED1-207ENST00000445983 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
CITED1-207ENST00000445983 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
CITED1-207ENST00000445983 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
CITED1-207ENST00000445983 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
CITED1-207ENST00000445983 PARP4Q9UKK3 1724 aaKnown RBP17.08■□□□□ 0.32
CITED1-207ENST00000445983 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
CITED1-207ENST00000445983 IL2RBP14784 551 aa17.08■□□□□ 0.32
CITED1-207ENST00000445983 IL16Q14005 1332 aa17.07■□□□□ 0.32
CITED1-207ENST00000445983 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
CITED1-207ENST00000445983 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
CITED1-207ENST00000445983 MCM10Q7L590 875 aa17.07■□□□□ 0.32
CITED1-207ENST00000445983 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
CITED1-207ENST00000445983 MEGF6O75095 1541 aa17.06■□□□□ 0.32
CITED1-207ENST00000445983 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
CITED1-207ENST00000445983 NRAPQ86VF7 1730 aa17.06■□□□□ 0.32
CITED1-207ENST00000445983 LRP6O75581 1613 aa17.06■□□□□ 0.32
CITED1-207ENST00000445983 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
CITED1-207ENST00000445983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
CITED1-207ENST00000445983 SLIT2O94813 1529 aa17.05■□□□□ 0.32
CITED1-207ENST00000445983 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
CITED1-207ENST00000445983 GNAI1P63096 354 aa17.04■□□□□ 0.32
CITED1-207ENST00000445983 DUSP27Q5VZP5 1158 aa17.04■□□□□ 0.32
CITED1-207ENST00000445983 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
CITED1-207ENST00000445983 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
CITED1-207ENST00000445983 ZCRB1Q8TBF4 217 aaKnown RBP17.03■□□□□ 0.32
CITED1-207ENST00000445983 USP21Q9UK80 565 aa17.03■□□□□ 0.32
CITED1-207ENST00000445983 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
CITED1-207ENST00000445983 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
CITED1-207ENST00000445983 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
CITED1-207ENST00000445983 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
CITED1-207ENST00000445983 PCDH11XQ9BZA7 1347 aa17.01■□□□□ 0.31
CITED1-207ENST00000445983 PCDH11YQ9BZA8 1340 aa17.01■□□□□ 0.31
CITED1-207ENST00000445983 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
CITED1-207ENST00000445983 FNBP4Q8N3X1 1017 aaPredicted RBP17.01■□□□□ 0.31
CITED1-207ENST00000445983 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
CITED1-207ENST00000445983 THRAP3Q9Y2W1 955 aaKnown RBP17.01■□□□□ 0.31
CITED1-207ENST00000445983 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
CITED1-207ENST00000445983 TEFQ10587 303 aa17■□□□□ 0.31
CITED1-207ENST00000445983 MPRIPQ6WCQ1 1025 aa17■□□□□ 0.31
CITED1-207ENST00000445983 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
CITED1-207ENST00000445983 CFAP44Q96MT7 982 aa17■□□□□ 0.31
CITED1-207ENST00000445983 CDCA7Q9BWT1 371 aaPredicted RBP17■□□□□ 0.31
CITED1-207ENST00000445983 AFF2P51816 1311 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
CITED1-207ENST00000445983 PHKG2P15735 406 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 VPS72Q15906 364 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
CITED1-207ENST00000445983 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
CITED1-207ENST00000445983 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CITED1-207ENST00000445983 A0A0G2JS52 829 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 MYT1Q01538 1121 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 TSPYL4Q9UJ04 414 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 SUPT16HQ9Y5B9 1047 aaKnown RBP16.98■□□□□ 0.31
CITED1-207ENST00000445983 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
CITED1-207ENST00000445983 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
CITED1-207ENST00000445983 EXOC5O00471 708 aa16.97■□□□□ 0.31
CITED1-207ENST00000445983 NEFLP07196 543 aa16.97■□□□□ 0.31
CITED1-207ENST00000445983 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
CITED1-207ENST00000445983 BCL9LQ86UU0 1499 aa16.97■□□□□ 0.31
CITED1-207ENST00000445983 CYP27B1O15528 508 aa16.96■□□□□ 0.31
CITED1-207ENST00000445983 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
CITED1-207ENST00000445983 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
CITED1-207ENST00000445983 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
CITED1-207ENST00000445983 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
CITED1-207ENST00000445983 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
CITED1-207ENST00000445983 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
CITED1-207ENST00000445983 DDB1Q16531 1140 aa16.94■□□□□ 0.3
CITED1-207ENST00000445983 BARGINQ6ZT62 677 aa16.94■□□□□ 0.3
CITED1-207ENST00000445983 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
CITED1-207ENST00000445983 TRPC5Q9UL62 973 aaPredicted RBP16.94■□□□□ 0.3
CITED1-207ENST00000445983 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
CITED1-207ENST00000445983 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
CITED1-207ENST00000445983 CHL1O00533 1208 aa16.93■□□□□ 0.3
CITED1-207ENST00000445983 CABP4P57796 275 aa16.93■□□□□ 0.3
CITED1-207ENST00000445983 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
CITED1-207ENST00000445983 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
CITED1-207ENST00000445983 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
CITED1-207ENST00000445983 BABAM1Q9NWV8 329 aa16.92■□□□□ 0.3
CITED1-207ENST00000445983 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
CITED1-207ENST00000445983 TNS2Q63HR2 1409 aa16.91■□□□□ 0.3
CITED1-207ENST00000445983 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
CITED1-207ENST00000445983 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
CITED1-207ENST00000445983 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
CITED1-207ENST00000445983 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
CITED1-207ENST00000445983 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
CITED1-207ENST00000445983 CANXP27824 592 aaKnown RBP16.89■□□□□ 0.29
CITED1-207ENST00000445983 TWISTNBQ3B726 338 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms