RNA–Protein interactions for RNA: ENST00000445924.5

ARPC1B-210, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-210ENST00000445924 FBXO41Q8TF61 875 aa18.3■□□□□ 0.52
ARPC1B-210ENST00000445924 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
ARPC1B-210ENST00000445924 SLIT2O94813 1529 aa18.29■□□□□ 0.52
ARPC1B-210ENST00000445924 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
ARPC1B-210ENST00000445924 LRP6O75581 1613 aa18.28■□□□□ 0.52
ARPC1B-210ENST00000445924 E9PSI1 815 aa18.28■□□□□ 0.52
ARPC1B-210ENST00000445924 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
ARPC1B-210ENST00000445924 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
ARPC1B-210ENST00000445924 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
ARPC1B-210ENST00000445924 GNAT3A8MTJ3 354 aa18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 IL2RBP14784 551 aa18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 TRIM35Q9UPQ4 493 aa18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
ARPC1B-210ENST00000445924 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
ARPC1B-210ENST00000445924 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
ARPC1B-210ENST00000445924 USP35Q9P2H5 1018 aa18.26■□□□□ 0.51
ARPC1B-210ENST00000445924 THRAP3Q9Y2W1 955 aaKnown RBP18.26■□□□□ 0.51
ARPC1B-210ENST00000445924 PKD1L3Q7Z443 1732 aa18.26■□□□□ 0.51
ARPC1B-210ENST00000445924 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
ARPC1B-210ENST00000445924 IL16Q14005 1332 aa18.25■□□□□ 0.51
ARPC1B-210ENST00000445924 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
ARPC1B-210ENST00000445924 MYH16Q9H6N6 1097 aa18.25■□□□□ 0.51
ARPC1B-210ENST00000445924 MEGF6O75095 1541 aa18.24■□□□□ 0.51
ARPC1B-210ENST00000445924 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
ARPC1B-210ENST00000445924 CDCA7Q9BWT1 371 aaPredicted RBP18.24■□□□□ 0.51
ARPC1B-210ENST00000445924 USP21Q9UK80 565 aa18.24■□□□□ 0.51
ARPC1B-210ENST00000445924 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
ARPC1B-210ENST00000445924 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
ARPC1B-210ENST00000445924 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
ARPC1B-210ENST00000445924 HSP90AB1P08238 724 aaKnown RBP18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 IFNL2Q8IZJ0 200 aa18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 ZCRB1Q8TBF4 217 aaKnown RBP18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 PCDH11XQ9BZA7 1347 aa18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 PCDH11YQ9BZA8 1340 aa18.22■□□□□ 0.51
ARPC1B-210ENST00000445924 GNAI1P63096 354 aa18.21■□□□□ 0.51
ARPC1B-210ENST00000445924 VPS72Q15906 364 aa18.21■□□□□ 0.51
ARPC1B-210ENST00000445924 SPATA31A5Q5VU36 1347 aa18.21■□□□□ 0.51
ARPC1B-210ENST00000445924 SPATA31A7Q8IWB4 1347 aa18.21■□□□□ 0.51
ARPC1B-210ENST00000445924 MCM10Q7L590 875 aa18.2■□□□□ 0.5
ARPC1B-210ENST00000445924 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
ARPC1B-210ENST00000445924 AFF2P51816 1311 aa18.2■□□□□ 0.5
ARPC1B-210ENST00000445924 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
ARPC1B-210ENST00000445924 DCTN1Q14203 1278 aa18.19■□□□□ 0.5
ARPC1B-210ENST00000445924 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
ARPC1B-210ENST00000445924 BARGINQ6ZT62 677 aa18.18■□□□□ 0.5
ARPC1B-210ENST00000445924 LRRC37A3O60309 1634 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 EXOC5O00471 708 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 PHKG2P15735 406 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 TRMT2AQ8IZ69 625 aaKnown RBP18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
ARPC1B-210ENST00000445924 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
ARPC1B-210ENST00000445924 TEFQ10587 303 aa18.16■□□□□ 0.5
ARPC1B-210ENST00000445924 TRPC5Q9UL62 973 aaPredicted RBP18.16■□□□□ 0.5
ARPC1B-210ENST00000445924 RNMTO43148 476 aaKnown RBP18.15■□□□□ 0.5
ARPC1B-210ENST00000445924 DCAF5Q96JK2 942 aa18.15■□□□□ 0.5
ARPC1B-210ENST00000445924 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
ARPC1B-210ENST00000445924 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
ARPC1B-210ENST00000445924 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
ARPC1B-210ENST00000445924 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
ARPC1B-210ENST00000445924 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
ARPC1B-210ENST00000445924 TNS2Q63HR2 1409 aa18.14■□□□□ 0.49
ARPC1B-210ENST00000445924 ADAMTS7Q9UKP4 1686 aa18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 TAF7Q15545 349 aaPredicted RBP18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 DDB1Q16531 1140 aa18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 IL17REQ8NFR9 667 aa18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 CEMIPQ8WUJ3 1361 aa18.13■□□□□ 0.49
ARPC1B-210ENST00000445924 A0A0G2JS52 829 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 CYP27B1O15528 508 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 ZNF853P0CG23 659 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 MYT1Q01538 1121 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 TSR2Q969E8 191 aaKnown RBP18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 ATRNO75882 1429 aa18.12■□□□□ 0.49
ARPC1B-210ENST00000445924 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
ARPC1B-210ENST00000445924 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
ARPC1B-210ENST00000445924 LGR6Q9HBX8 967 aa18.11■□□□□ 0.49
ARPC1B-210ENST00000445924 CHL1O00533 1208 aa18.1■□□□□ 0.49
ARPC1B-210ENST00000445924 FAM98CQ17RN3 349 aaKnown RBP18.1■□□□□ 0.49
ARPC1B-210ENST00000445924 MBIPQ9NS73 344 aa18.1■□□□□ 0.49
ARPC1B-210ENST00000445924 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
ARPC1B-210ENST00000445924 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
ARPC1B-210ENST00000445924 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
ARPC1B-210ENST00000445924 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
ARPC1B-210ENST00000445924 CABP4P57796 275 aa18.08■□□□□ 0.48
ARPC1B-210ENST00000445924 EXOSC9Q06265 439 aaKnown RBP18.08■□□□□ 0.48
ARPC1B-210ENST00000445924 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
ARPC1B-210ENST00000445924 BTBD11A6QL63 1104 aa18.07■□□□□ 0.48
ARPC1B-210ENST00000445924 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
ARPC1B-210ENST00000445924 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
ARPC1B-210ENST00000445924 GLI3P10071 1580 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms