RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 DOT1LQ8TEK3 1739 aa19.93■□□□□ 0.78
SHANK2-209ENST00000445654 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
SHANK2-209ENST00000445654 USP47Q96K76 1375 aa19.92■□□□□ 0.78
SHANK2-209ENST00000445654 COL23A1Q86Y22 540 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-209ENST00000445654 NME9Q86XW9 330 aa19.9■□□□□ 0.78
SHANK2-209ENST00000445654 IP6K1Q92551 441 aa19.9■□□□□ 0.78
SHANK2-209ENST00000445654 APLP1P51693 650 aa19.89■□□□□ 0.77
SHANK2-209ENST00000445654 KCNQ4P56696 695 aa19.89■□□□□ 0.77
SHANK2-209ENST00000445654 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
SHANK2-209ENST00000445654 EDC4Q6P2E9 1401 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 ROCK2O75116 1388 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
SHANK2-209ENST00000445654 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
SHANK2-209ENST00000445654 NSD2O96028 1365 aa19.87■□□□□ 0.77
SHANK2-209ENST00000445654 MSL1Q68DK7 614 aa19.86■□□□□ 0.77
SHANK2-209ENST00000445654 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
SHANK2-209ENST00000445654 CGNL1Q0VF96 1302 aa19.85■□□□□ 0.77
SHANK2-209ENST00000445654 NSD3Q9BZ95 1437 aa19.85■□□□□ 0.77
SHANK2-209ENST00000445654 C5P01031 1676 aa19.84■□□□□ 0.77
SHANK2-209ENST00000445654 TMC1Q8TDI8 760 aa19.83■□□□□ 0.77
SHANK2-209ENST00000445654 LTV1Q96GA3 475 aaPredicted RBP19.83■□□□□ 0.77
SHANK2-209ENST00000445654 CD163L1Q9NR16 1453 aa19.82■□□□□ 0.76
SHANK2-209ENST00000445654 L3MBTL2Q969R5 705 aa19.82■□□□□ 0.76
SHANK2-209ENST00000445654 IGSF1Q8N6C5 1336 aa19.81■□□□□ 0.76
SHANK2-209ENST00000445654 KIF3CO14782 793 aa19.81■□□□□ 0.76
SHANK2-209ENST00000445654 TOMM70O94826 608 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 AMPHP49418 695 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 AK7Q96M32 723 aa19.79■□□□□ 0.76
SHANK2-209ENST00000445654 RAPGEF4Q8WZA2 1011 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 SMARCC1Q92922 1105 aaPredicted RBP19.78■□□□□ 0.76
SHANK2-209ENST00000445654 COG3Q96JB2 828 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 PUS7Q96PZ0 661 aaKnown RBP19.78■□□□□ 0.76
SHANK2-209ENST00000445654 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
SHANK2-209ENST00000445654 HOXC9P31274 260 aa19.77■□□□□ 0.76
SHANK2-209ENST00000445654 RTL1A6NKG5 1358 aa19.77■□□□□ 0.76
SHANK2-209ENST00000445654 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
SHANK2-209ENST00000445654 MEGF6O75095 1541 aa19.76■□□□□ 0.75
SHANK2-209ENST00000445654 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-209ENST00000445654 PALLDQ8WX93 1383 aa19.76■□□□□ 0.75
SHANK2-209ENST00000445654 A0A1W2PP64 1363 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 C4BP0C0L5 1744 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 MAP3K19Q56UN5 1328 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 PCDH11XQ9BZA7 1347 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 PCDH11YQ9BZA8 1340 aa19.75■□□□□ 0.75
SHANK2-209ENST00000445654 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
SHANK2-209ENST00000445654 SSFA2P28290 1259 aa19.73■□□□□ 0.75
SHANK2-209ENST00000445654 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
SHANK2-209ENST00000445654 RGPD2P0DJD1 1756 aa19.72■□□□□ 0.75
SHANK2-209ENST00000445654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
SHANK2-209ENST00000445654 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
SHANK2-209ENST00000445654 UBR3Q6ZT12 1888 aa19.7■□□□□ 0.74
SHANK2-209ENST00000445654 SLC24A1O60721 1099 aa19.69■□□□□ 0.74
SHANK2-209ENST00000445654 C16orf71Q8IYS4 520 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-209ENST00000445654 WDR90Q96KV7 1748 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 PHF14O94880 888 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 TGFB2P61812 414 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 NBPF6Q5VWK0 638 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 RBM46Q8TBY0 533 aaKnown RBP19.68■□□□□ 0.74
SHANK2-209ENST00000445654 NBPF4Q96M43 638 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 CARD11Q9BXL7 1154 aa19.68■□□□□ 0.74
SHANK2-209ENST00000445654 WWC3Q9ULE0 1092 aa19.67■□□□□ 0.74
SHANK2-209ENST00000445654 TOGARAM1Q9Y4F4 1720 aa19.67■□□□□ 0.74
SHANK2-209ENST00000445654 FSTL1Q12841 308 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 KLRG1Q96E93 195 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 PLEKHG2Q9H7P9 1386 aa19.66■□□□□ 0.74
SHANK2-209ENST00000445654 JMYQ8N9B5 988 aa19.65■□□□□ 0.74
SHANK2-209ENST00000445654 ITGB4P16144 1822 aa19.64■□□□□ 0.73
SHANK2-209ENST00000445654 KIF13BQ9NQT8 1826 aa19.64■□□□□ 0.73
SHANK2-209ENST00000445654 KIF24Q5T7B8 1368 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 USHBP1Q8N6Y0 703 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 BCS1LQ9Y276 419 aa19.63■□□□□ 0.73
SHANK2-209ENST00000445654 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 INSRP06213 1382 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
SHANK2-209ENST00000445654 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 SIK1P57059 783 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 TNS4Q8IZW8 715 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
SHANK2-209ENST00000445654 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 GNPATO15228 680 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 CYP27B1O15528 508 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 MMP10P09238 476 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 NEUROD1Q13562 356 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 COL13A1Q5TAT6 717 aaPredicted RBP19.6■□□□□ 0.73
SHANK2-209ENST00000445654 NMRK2Q9NPI5 230 aa19.6■□□□□ 0.73
SHANK2-209ENST00000445654 FLT4P35916 1363 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PRELPP51888 382 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 AMIGO3Q86WK7 504 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PIGBQ92521 554 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 SIN3AQ96ST3 1273 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 PKD1L3Q7Z443 1732 aa19.59■□□□□ 0.73
SHANK2-209ENST00000445654 MAP2P11137 1827 aaKnown RBP19.58■□□□□ 0.73
SHANK2-209ENST00000445654 FCHSD2O94868 740 aa19.58■□□□□ 0.72
SHANK2-209ENST00000445654 RRS1Q15050 365 aaKnown RBP19.58■□□□□ 0.72
SHANK2-209ENST00000445654 NKX1-1Q15270 411 aaPredicted RBP19.58■□□□□ 0.72
SHANK2-209ENST00000445654 KIAA1551Q9HCM1 1747 aa19.57■□□□□ 0.72
SHANK2-209ENST00000445654 FBLN1P23142 703 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms