RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 NCAPD2Q15021 1401 aa25.97■■□□□ 1.75
COMMD1-204ENST00000445644 KAT6BQ8WYB5 2073 aa25.96■■□□□ 1.75
COMMD1-204ENST00000445644 CASZ1Q86V15 1759 aa25.96■■□□□ 1.75
COMMD1-204ENST00000445644 PAPPAQ13219 1627 aa25.95■■□□□ 1.74
COMMD1-204ENST00000445644 KIF7Q2M1P5 1343 aa25.94■■□□□ 1.74
COMMD1-204ENST00000445644 DDX54Q8TDD1 881 aaKnown RBP25.94■■□□□ 1.74
COMMD1-204ENST00000445644 ANO8Q9HCE9 1232 aaPredicted RBP25.94■■□□□ 1.74
COMMD1-204ENST00000445644 POLKQ9UBT6 870 aa25.94■■□□□ 1.74
COMMD1-204ENST00000445644 WASHC2AQ641Q2 1341 aa25.92■■□□□ 1.74
COMMD1-204ENST00000445644 TOGARAM1Q9Y4F4 1720 aa25.91■■□□□ 1.74
COMMD1-204ENST00000445644 PPM1GO15355 546 aaPredicted RBP25.91■■□□□ 1.74
COMMD1-204ENST00000445644 TXNRD1Q16881 649 aa25.91■■□□□ 1.74
COMMD1-204ENST00000445644 NBPF14Q5TI25 921 aa25.91■■□□□ 1.74
COMMD1-204ENST00000445644 ZCRB1Q8TBF4 217 aaKnown RBP25.91■■□□□ 1.74
COMMD1-204ENST00000445644 LY75O60449 1722 aa25.9■■□□□ 1.74
COMMD1-204ENST00000445644 NSD2O96028 1365 aa25.9■■□□□ 1.74
COMMD1-204ENST00000445644 TNNT2P45379 298 aaPredicted RBP25.89■■□□□ 1.74
COMMD1-204ENST00000445644 ITGB4P16144 1822 aa25.86■■□□□ 1.73
COMMD1-204ENST00000445644 RAPGEF4Q8WZA2 1011 aa25.86■■□□□ 1.73
COMMD1-204ENST00000445644 TATP17735 454 aaPredicted RBP25.85■■□□□ 1.73
COMMD1-204ENST00000445644 EYA1Q99502 592 aa25.84■■□□□ 1.73
COMMD1-204ENST00000445644 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.73
COMMD1-204ENST00000445644 PRIM1P49642 420 aaKnown RBP25.82■■□□□ 1.72
COMMD1-204ENST00000445644 EIF4A2Q14240 407 aaKnown RBP25.82■■□□□ 1.72
COMMD1-204ENST00000445644 PDGFDQ9GZP0 370 aaPredicted RBP25.82■■□□□ 1.72
COMMD1-204ENST00000445644 AMER1Q5JTC6 1135 aaPredicted RBP25.81■■□□□ 1.72
COMMD1-204ENST00000445644 QSER1Q2KHR3 1735 aa25.8■■□□□ 1.72
COMMD1-204ENST00000445644 CYP27B1O15528 508 aa25.8■■□□□ 1.72
COMMD1-204ENST00000445644 LRRC4BQ9NT99 713 aa25.8■■□□□ 1.72
COMMD1-204ENST00000445644 PCDH11XQ9BZA7 1347 aa25.8■■□□□ 1.72
COMMD1-204ENST00000445644 PCDH11YQ9BZA8 1340 aa25.8■■□□□ 1.72
COMMD1-204ENST00000445644 KNSTRNQ9Y448 316 aa25.79■■□□□ 1.72
COMMD1-204ENST00000445644 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
COMMD1-204ENST00000445644 SYTL4Q96C24 671 aaPredicted RBP25.78■■□□□ 1.72
COMMD1-204ENST00000445644 PER1O15534 1290 aaPredicted RBP25.77■■□□□ 1.72
COMMD1-204ENST00000445644 SLC15A2Q16348 729 aa25.77■■□□□ 1.72
COMMD1-204ENST00000445644 IGSF1Q8N6C5 1336 aa25.75■■□□□ 1.71
COMMD1-204ENST00000445644 STK32BQ9NY57 414 aa25.75■■□□□ 1.71
COMMD1-204ENST00000445644 ZNF827Q17R98 1081 aa25.74■■□□□ 1.71
COMMD1-204ENST00000445644 TAF1LQ8IZX4 1826 aa25.74■■□□□ 1.71
COMMD1-204ENST00000445644 C5P01031 1676 aa25.73■■□□□ 1.71
COMMD1-204ENST00000445644 KCNQ4P56696 695 aa25.72■■□□□ 1.71
COMMD1-204ENST00000445644 SPON1Q9HCB6 807 aa25.7■■□□□ 1.7
COMMD1-204ENST00000445644 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
COMMD1-204ENST00000445644 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
COMMD1-204ENST00000445644 AKT1S1Q96B36 256 aa25.69■■□□□ 1.7
COMMD1-204ENST00000445644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.68■■□□□ 1.7
COMMD1-204ENST00000445644 SPG7Q9UQ90 795 aa25.68■■□□□ 1.7
COMMD1-204ENST00000445644 COL24A1Q17RW2 1714 aa25.68■■□□□ 1.7
COMMD1-204ENST00000445644 ZBTB7AO95365 584 aa25.67■■□□□ 1.7
COMMD1-204ENST00000445644 PLEKHG2Q9H7P9 1386 aa25.67■■□□□ 1.7
COMMD1-204ENST00000445644 PHKG2P15735 406 aa25.65■■□□□ 1.7
COMMD1-204ENST00000445644 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
COMMD1-204ENST00000445644 AEBP1Q8IUX7 1158 aa25.65■■□□□ 1.7
COMMD1-204ENST00000445644 IL13P35225 146 aa25.64■■□□□ 1.7
COMMD1-204ENST00000445644 PTGER2P43116 358 aa25.64■■□□□ 1.7
COMMD1-204ENST00000445644 MPRIPQ6WCQ1 1025 aa25.64■■□□□ 1.7
COMMD1-204ENST00000445644 CCNL1Q9UK58 526 aaPredicted RBP25.63■■□□□ 1.69
COMMD1-204ENST00000445644 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
COMMD1-204ENST00000445644 KDRP35968 1356 aa25.62■■□□□ 1.69
COMMD1-204ENST00000445644 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
COMMD1-204ENST00000445644 ATF5Q9Y2D1 282 aaPredicted RBP25.62■■□□□ 1.69
COMMD1-204ENST00000445644 VIRMAQ69YN4 1812 aaKnown RBP25.62■■□□□ 1.69
COMMD1-204ENST00000445644 IFNL2Q8IZJ0 200 aa25.61■■□□□ 1.69
COMMD1-204ENST00000445644 PIGBQ92521 554 aa25.61■■□□□ 1.69
COMMD1-204ENST00000445644 PNPLA7Q6ZV29 1317 aa25.61■■□□□ 1.69
COMMD1-204ENST00000445644 MTHFSP49914 203 aa25.6■■□□□ 1.69
COMMD1-204ENST00000445644 SGIP1Q9BQI5 828 aa25.6■■□□□ 1.69
COMMD1-204ENST00000445644 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
COMMD1-204ENST00000445644 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
COMMD1-204ENST00000445644 MTFR1LQ9H019 292 aa25.59■■□□□ 1.69
COMMD1-204ENST00000445644 KDM6AO15550 1401 aaPredicted RBP25.58■■□□□ 1.69
COMMD1-204ENST00000445644 SCN11AQ9UI33 1791 aa25.58■■□□□ 1.69
COMMD1-204ENST00000445644 SULT6B1Q6IMI4 303 aa25.57■■□□□ 1.68
COMMD1-204ENST00000445644 PPP1R1BQ9UD71 204 aaPredicted RBP25.57■■□□□ 1.68
COMMD1-204ENST00000445644 UBR3Q6ZT12 1888 aa25.57■■□□□ 1.68
COMMD1-204ENST00000445644 CNGB1Q14028 1251 aaPredicted RBP25.55■■□□□ 1.68
COMMD1-204ENST00000445644 PLEKHO1Q53GL0 409 aaPredicted RBP25.54■■□□□ 1.68
COMMD1-204ENST00000445644 TFCP2L1Q9NZI6 479 aa25.54■■□□□ 1.68
COMMD1-204ENST00000445644 ZNF831Q5JPB2 1677 aa25.53■■□□□ 1.68
COMMD1-204ENST00000445644 TMOD3Q9NYL9 352 aa25.53■■□□□ 1.68
COMMD1-204ENST00000445644 ZNF530Q6P9A1 599 aaPredicted RBP25.52■■□□□ 1.68
COMMD1-204ENST00000445644 SMARCC1Q92922 1105 aaPredicted RBP25.52■■□□□ 1.68
COMMD1-204ENST00000445644 ASAP1Q9ULH1 1129 aa25.52■■□□□ 1.68
COMMD1-204ENST00000445644 COL5A3P25940 1745 aaPredicted RBP25.51■■□□□ 1.68
COMMD1-204ENST00000445644 AMOTQ4VCS5 1084 aa25.51■■□□□ 1.67
COMMD1-204ENST00000445644 ADAMTS7Q9UKP4 1686 aa25.49■■□□□ 1.67
COMMD1-204ENST00000445644 DCAF5Q96JK2 942 aa25.49■■□□□ 1.67
COMMD1-204ENST00000445644 ATG3Q9NT62 314 aa25.49■■□□□ 1.67
COMMD1-204ENST00000445644 HMOX1P09601 288 aa25.48■■□□□ 1.67
COMMD1-204ENST00000445644 AMIGO3Q86WK7 504 aa25.48■■□□□ 1.67
COMMD1-204ENST00000445644 COL23A1Q86Y22 540 aaPredicted RBP25.48■■□□□ 1.67
COMMD1-204ENST00000445644 ERVV-2B6SEH9 535 aa25.47■■□□□ 1.67
COMMD1-204ENST00000445644 DIAPH1O60610 1272 aaKnown RBP25.47■■□□□ 1.67
COMMD1-204ENST00000445644 SLC16A10Q8TF71 515 aa25.47■■□□□ 1.67
COMMD1-204ENST00000445644 LOC102724428A0A0B4J2F2 783 aa25.46■■□□□ 1.67
COMMD1-204ENST00000445644 HSP90AB1P08238 724 aaKnown RBP25.46■■□□□ 1.67
COMMD1-204ENST00000445644 SIK1P57059 783 aa25.46■■□□□ 1.67
COMMD1-204ENST00000445644 LINC00116Q8NCU8 138 aa25.46■■□□□ 1.67
COMMD1-204ENST00000445644 ITPK1Q13572 414 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms