RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
NPHP1-207ENST00000445609 USP35Q9P2H5 1018 aa12.47□□□□□ -0.41
NPHP1-207ENST00000445609 PLEKHG2Q9H7P9 1386 aa12.46□□□□□ -0.41
NPHP1-207ENST00000445609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPHP1-207ENST00000445609 IL2RBP14784 551 aa12.46□□□□□ -0.42
NPHP1-207ENST00000445609 SPG7Q9UQ90 795 aa12.46□□□□□ -0.42
NPHP1-207ENST00000445609 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
NPHP1-207ENST00000445609 E9PSI1 815 aa12.45□□□□□ -0.42
NPHP1-207ENST00000445609 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
NPHP1-207ENST00000445609 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
NPHP1-207ENST00000445609 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
NPHP1-207ENST00000445609 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
NPHP1-207ENST00000445609 SLFN5Q08AF3 891 aa12.45□□□□□ -0.42
NPHP1-207ENST00000445609 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
NPHP1-207ENST00000445609 MEGF6O75095 1541 aa12.45□□□□□ -0.42
NPHP1-207ENST00000445609 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 IL16Q14005 1332 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 DCTN1Q14203 1278 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
NPHP1-207ENST00000445609 USP21Q9UK80 565 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 THRAP3Q9Y2W1 955 aaKnown RBP12.44□□□□□ -0.42
NPHP1-207ENST00000445609 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
NPHP1-207ENST00000445609 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 OVOS2A0A0G2JMS6 1433 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 MCM10Q7L590 875 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
NPHP1-207ENST00000445609 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
NPHP1-207ENST00000445609 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
NPHP1-207ENST00000445609 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 VPS72Q15906 364 aa12.43□□□□□ -0.42
NPHP1-207ENST00000445609 ZCRB1Q8TBF4 217 aaKnown RBP12.42□□□□□ -0.42
NPHP1-207ENST00000445609 MYH16Q9H6N6 1097 aa12.42□□□□□ -0.42
NPHP1-207ENST00000445609 DUSP27Q5VZP5 1158 aa12.42□□□□□ -0.42
NPHP1-207ENST00000445609 AFF2P51816 1311 aa12.41□□□□□ -0.42
NPHP1-207ENST00000445609 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
NPHP1-207ENST00000445609 IFNL2Q8IZJ0 200 aa12.41□□□□□ -0.42
NPHP1-207ENST00000445609 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
NPHP1-207ENST00000445609 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
NPHP1-207ENST00000445609 PHKG2P15735 406 aa12.41□□□□□ -0.42
NPHP1-207ENST00000445609 GNAI1P63096 354 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 IFT57Q9NWB7 429 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 DISP2A7MBM2 1401 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 CYP27B1O15528 508 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
NPHP1-207ENST00000445609 LAS1LQ9Y4W2 734 aaKnown RBP12.4□□□□□ -0.42
NPHP1-207ENST00000445609 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.43
NPHP1-207ENST00000445609 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.43
NPHP1-207ENST00000445609 HSP90AB1P08238 724 aaKnown RBP12.39□□□□□ -0.43
NPHP1-207ENST00000445609 ZNF853P0CG23 659 aa12.39□□□□□ -0.43
NPHP1-207ENST00000445609 LGR6Q9HBX8 967 aa12.39□□□□□ -0.43
NPHP1-207ENST00000445609 EXOC5O00471 708 aa12.38□□□□□ -0.43
NPHP1-207ENST00000445609 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
NPHP1-207ENST00000445609 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
NPHP1-207ENST00000445609 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
NPHP1-207ENST00000445609 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
NPHP1-207ENST00000445609 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
NPHP1-207ENST00000445609 DCAF5Q96JK2 942 aa12.38□□□□□ -0.43
NPHP1-207ENST00000445609 TRPC5Q9UL62 973 aaPredicted RBP12.38□□□□□ -0.43
NPHP1-207ENST00000445609 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
NPHP1-207ENST00000445609 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
NPHP1-207ENST00000445609 CHL1O00533 1208 aa12.37□□□□□ -0.43
NPHP1-207ENST00000445609 TEFQ10587 303 aa12.37□□□□□ -0.43
NPHP1-207ENST00000445609 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-207ENST00000445609 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
NPHP1-207ENST00000445609 MBIPQ9NS73 344 aa12.37□□□□□ -0.43
NPHP1-207ENST00000445609 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
NPHP1-207ENST00000445609 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
NPHP1-207ENST00000445609 FAM98CQ17RN3 349 aaKnown RBP12.36□□□□□ -0.43
NPHP1-207ENST00000445609 DDB1Q16531 1140 aa12.36□□□□□ -0.43
NPHP1-207ENST00000445609 QTRT2Q9H974 415 aaKnown RBP12.36□□□□□ -0.43
NPHP1-207ENST00000445609 BABAM1Q9NWV8 329 aa12.36□□□□□ -0.43
NPHP1-207ENST00000445609 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
NPHP1-207ENST00000445609 ATRNO75882 1429 aa12.35□□□□□ -0.43
NPHP1-207ENST00000445609 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
NPHP1-207ENST00000445609 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
NPHP1-207ENST00000445609 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
NPHP1-207ENST00000445609 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-207ENST00000445609 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
NPHP1-207ENST00000445609 RCAN3Q9UKA8 241 aa12.34□□□□□ -0.43
NPHP1-207ENST00000445609 TNS2Q63HR2 1409 aa12.33□□□□□ -0.43
NPHP1-207ENST00000445609 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
NPHP1-207ENST00000445609 A0A0G2JS52 829 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
NPHP1-207ENST00000445609 CT47B1P0C2W7 299 aaPredicted RBP12.32□□□□□ -0.44
NPHP1-207ENST00000445609 MYT1Q01538 1121 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 CABP4P57796 275 aa12.32□□□□□ -0.44
NPHP1-207ENST00000445609 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
NPHP1-207ENST00000445609 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
NPHP1-207ENST00000445609 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
NPHP1-207ENST00000445609 C8orf58Q8NAV2 365 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms