RNA–Protein interactions for RNA: ENST00000445371.1

SDHCP3-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 3, humanhuman

BASIC

Gene SDHCP3, Length 506 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP3-201ENST00000445371 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 IL16Q14005 1332 aa9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 ZNF521Q96K83 1311 aa9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 MAP2P11137 1827 aaKnown RBP9.19□□□□□ -0.94
SDHCP3-201ENST00000445371 LTN1O94822 1766 aa9.18□□□□□ -0.94
SDHCP3-201ENST00000445371 IL2RBP14784 551 aa9.18□□□□□ -0.94
SDHCP3-201ENST00000445371 CRB1P82279 1406 aa9.18□□□□□ -0.94
SDHCP3-201ENST00000445371 AKAP4Q5JQC9 854 aa9.18□□□□□ -0.94
SDHCP3-201ENST00000445371 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
SDHCP3-201ENST00000445371 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 NEFLP07196 543 aa9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 GNAI1P63096 354 aa9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 MCM10Q7L590 875 aa9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.17□□□□□ -0.94
SDHCP3-201ENST00000445371 HSP90AB1P08238 724 aaKnown RBP9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 TEFQ10587 303 aa9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 DCTN1Q14203 1278 aa9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 UNC5CLQ8IV45 518 aa9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 ZCRB1Q8TBF4 217 aaKnown RBP9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 THUMPD2Q9BTF0 503 aaKnown RBP9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
SDHCP3-201ENST00000445371 NCAPD2Q15021 1401 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 PLEKHG2Q9H7P9 1386 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 COL14A1Q05707 1796 aaKnown RBP9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 RGPD1P0DJD0 1748 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 CRYBG1Q9Y4K1 1723 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 USP21Q9UK80 565 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 RCAN3Q9UKA8 241 aa9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 THRAP3Q9Y2W1 955 aaKnown RBP9.15□□□□□ -0.94
SDHCP3-201ENST00000445371 PCDH11XQ9BZA7 1347 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 PCDH11YQ9BZA8 1340 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 FANCIQ9NVI1 1328 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 A0A0G2JS52 829 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 MPRIPQ6WCQ1 1025 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 TSR2Q969E8 191 aaKnown RBP9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 CFAP44Q96MT7 982 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 TSPYL4Q9UJ04 414 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 ABCA3Q99758 1704 aa9.14□□□□□ -0.95
SDHCP3-201ENST00000445371 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 EXOC5O00471 708 aa9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 PHKG2P15735 406 aa9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 TRMT2AQ8IZ69 625 aaKnown RBP9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 DCAF5Q96JK2 942 aa9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 OVOS2A0A0G2JMS6 1433 aa9.13□□□□□ -0.95
SDHCP3-201ENST00000445371 SPATA31A1Q5TZJ5 1347 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 SPATA31A5Q5VU36 1347 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 SPATA31A7Q8IWB4 1347 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 MEGF6O75095 1541 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 CT47B1P0C2W7 299 aaPredicted RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 TAF7Q15545 349 aaPredicted RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 VPS72Q15906 364 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 IL17REQ8NFR9 667 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 COL18A1P39060 1754 aa9.12□□□□□ -0.95
SDHCP3-201ENST00000445371 SLIT2O94813 1529 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 AFF2P51816 1311 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 BTBD11A6QL63 1104 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 CABP4P57796 275 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 DDB1Q16531 1140 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 LGR6Q9HBX8 967 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 BABAM1Q9NWV8 329 aa9.11□□□□□ -0.95
SDHCP3-201ENST00000445371 LRP6O75581 1613 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 CHL1O00533 1208 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 CYP27B1O15528 508 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 ZNF853P0CG23 659 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 CHMP4AQ9BY43 222 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 MIS18AQ9NYP9 233 aa9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 TRPC5Q9UL62 973 aaPredicted RBP9.1□□□□□ -0.95
SDHCP3-201ENST00000445371 ELL2O00472 640 aaPredicted RBP9.09□□□□□ -0.95
SDHCP3-201ENST00000445371 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
SDHCP3-201ENST00000445371 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
SDHCP3-201ENST00000445371 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
SDHCP3-201ENST00000445371 CEMIPQ8WUJ3 1361 aa9.09□□□□□ -0.95
SDHCP3-201ENST00000445371 BCL9LQ86UU0 1499 aa9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 ZNF772Q68DY9 489 aaPredicted RBP9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 GJD4Q96KN9 370 aaPredicted RBP9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 SLC52A2Q9HAB3 445 aa9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 SMC4Q9NTJ3 1288 aa9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 GTF3C3Q9Y5Q9 886 aa9.08□□□□□ -0.96
SDHCP3-201ENST00000445371 RRP1P56182 461 aaKnown RBP9.07□□□□□ -0.96
SDHCP3-201ENST00000445371 FKBP8Q14318 412 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms