RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 RAPGEF4Q8WZA2 1011 aa30.56■■■□□ 2.48
LMBR1-211ENST00000444719 SHANK3Q9BYB0 1731 aa30.56■■■□□ 2.48
LMBR1-211ENST00000444719 MORC1Q86VD1 984 aa30.55■■■□□ 2.48
LMBR1-211ENST00000444719 RGPD3A6NKT7 1758 aaPredicted RBP30.55■■■□□ 2.48
LMBR1-211ENST00000444719 RGPD4Q7Z3J3 1758 aa30.55■■■□□ 2.48
LMBR1-211ENST00000444719 NSD2O96028 1365 aa30.54■■■□□ 2.48
LMBR1-211ENST00000444719 SRCAPQ6ZRS2 3230 aa30.53■■■□□ 2.48
LMBR1-211ENST00000444719 TATP17735 454 aaPredicted RBP30.52■■■□□ 2.48
LMBR1-211ENST00000444719 NBPF14Q5TI25 921 aa30.52■■■□□ 2.48
LMBR1-211ENST00000444719 BTAF1O14981 1849 aa30.51■■■□□ 2.47
LMBR1-211ENST00000444719 PROM2Q8N271 834 aa30.5■■■□□ 2.47
LMBR1-211ENST00000444719 EYA1Q99502 592 aa30.48■■■□□ 2.47
LMBR1-211ENST00000444719 AMER1Q5JTC6 1135 aaPredicted RBP30.47■■■□□ 2.47
LMBR1-211ENST00000444719 DOT1LQ8TEK3 1739 aa30.47■■■□□ 2.47
LMBR1-211ENST00000444719 EIF4A2Q14240 407 aaKnown RBP30.46■■■□□ 2.47
LMBR1-211ENST00000444719 SYTL4Q96C24 671 aaPredicted RBP30.46■■■□□ 2.47
LMBR1-211ENST00000444719 TXNRD1Q16881 649 aa30.45■■■□□ 2.47
LMBR1-211ENST00000444719 PRIM1P49642 420 aaKnown RBP30.44■■■□□ 2.46
LMBR1-211ENST00000444719 PER1O15534 1290 aaPredicted RBP30.43■■■□□ 2.46
LMBR1-211ENST00000444719 CNGB1Q14028 1251 aaPredicted RBP30.42■■■□□ 2.46
LMBR1-211ENST00000444719 CC2D1BQ5T0F9 858 aaKnown RBP30.41■■■□□ 2.46
LMBR1-211ENST00000444719 ANO8Q9HCE9 1232 aaPredicted RBP30.41■■■□□ 2.46
LMBR1-211ENST00000444719 NCAPD2Q15021 1401 aa30.4■■■□□ 2.46
LMBR1-211ENST00000444719 PCDH11XQ9BZA7 1347 aa30.39■■■□□ 2.46
LMBR1-211ENST00000444719 PCDH11YQ9BZA8 1340 aa30.39■■■□□ 2.46
LMBR1-211ENST00000444719 PKD1L3Q7Z443 1732 aa30.38■■■□□ 2.45
LMBR1-211ENST00000444719 LRP5O75197 1615 aa30.37■■■□□ 2.45
LMBR1-211ENST00000444719 CYP27B1O15528 508 aa30.37■■■□□ 2.45
LMBR1-211ENST00000444719 SPG7Q9UQ90 795 aa30.34■■■□□ 2.45
LMBR1-211ENST00000444719 IGSF1Q8N6C5 1336 aa30.32■■■□□ 2.44
LMBR1-211ENST00000444719 STK32BQ9NY57 414 aa30.31■■■□□ 2.44
LMBR1-211ENST00000444719 MTHFSP49914 203 aa30.3■■■□□ 2.44
LMBR1-211ENST00000444719 LRRC4BQ9NT99 713 aa30.3■■■□□ 2.44
LMBR1-211ENST00000444719 ITGB4P16144 1822 aa30.3■■■□□ 2.44
LMBR1-211ENST00000444719 KCNQ4P56696 695 aa30.29■■■□□ 2.44
LMBR1-211ENST00000444719 TOGARAM1Q9Y4F4 1720 aa30.28■■■□□ 2.44
LMBR1-211ENST00000444719 SLC15A2Q16348 729 aa30.28■■■□□ 2.44
LMBR1-211ENST00000444719 PDGFDQ9GZP0 370 aaPredicted RBP30.28■■■□□ 2.44
LMBR1-211ENST00000444719 MPRIPQ6WCQ1 1025 aa30.27■■■□□ 2.44
LMBR1-211ENST00000444719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.27■■■□□ 2.442e-7■□□□□ 9.4
LMBR1-211ENST00000444719 LY75O60449 1722 aa30.26■■■□□ 2.43
LMBR1-211ENST00000444719 AEBP1Q8IUX7 1158 aa30.26■■■□□ 2.43
LMBR1-211ENST00000444719 IL13P35225 146 aa30.25■■■□□ 2.43
LMBR1-211ENST00000444719 CASZ1Q86V15 1759 aa30.24■■■□□ 2.43
LMBR1-211ENST00000444719 PAPPAQ13219 1627 aa30.24■■■□□ 2.43
LMBR1-211ENST00000444719 NKX1-1Q15270 411 aaPredicted RBP30.23■■■□□ 2.43
LMBR1-211ENST00000444719 SLC27A3Q5K4L6 730 aa30.23■■■□□ 2.43
LMBR1-211ENST00000444719 SULT6B1Q6IMI4 303 aa30.23■■■□□ 2.43
LMBR1-211ENST00000444719 IFNL2Q8IZJ0 200 aa30.23■■■□□ 2.43
LMBR1-211ENST00000444719 NPC1L1Q9UHC9 1359 aa30.23■■■□□ 2.43
LMBR1-211ENST00000444719 PHKG2P15735 406 aa30.22■■■□□ 2.43
LMBR1-211ENST00000444719 ZNF827Q17R98 1081 aa30.2■■■□□ 2.43
LMBR1-211ENST00000444719 SPON1Q9HCB6 807 aa30.2■■■□□ 2.43
LMBR1-211ENST00000444719 ZBTB7AO95365 584 aa30.19■■■□□ 2.42
LMBR1-211ENST00000444719 PLEKHO1Q53GL0 409 aaPredicted RBP30.19■■■□□ 2.42
LMBR1-211ENST00000444719 CCNL1Q9UK58 526 aaPredicted RBP30.19■■■□□ 2.42
LMBR1-211ENST00000444719 PIGBQ92521 554 aa30.18■■■□□ 2.42
LMBR1-211ENST00000444719 ZNF530Q6P9A1 599 aaPredicted RBP30.16■■■□□ 2.42
LMBR1-211ENST00000444719 DIAPH1O60610 1272 aaKnown RBP30.15■■■□□ 2.42
LMBR1-211ENST00000444719 AKT1S1Q96B36 256 aa30.15■■■□□ 2.42
LMBR1-211ENST00000444719 ATF5Q9Y2D1 282 aaPredicted RBP30.15■■■□□ 2.42
LMBR1-211ENST00000444719 HMOX1P09601 288 aa30.14■■■□□ 2.42
LMBR1-211ENST00000444719 TMOD3Q9NYL9 352 aa30.14■■■□□ 2.42
LMBR1-211ENST00000444719 PALLDQ8WX93 1383 aa30.14■■■□□ 2.41
LMBR1-211ENST00000444719 AMOTQ4VCS5 1084 aa30.13■■■□□ 2.41
LMBR1-211ENST00000444719 KDRP35968 1356 aa30.13■■■□□ 2.41
LMBR1-211ENST00000444719 PLEKHG2Q9H7P9 1386 aa30.13■■■□□ 2.41
LMBR1-211ENST00000444719 TUBGCP6Q96RT7 1819 aa30.12■■■□□ 2.41
LMBR1-211ENST00000444719 PPP1R1BQ9UD71 204 aaPredicted RBP30.12■■■□□ 2.41
LMBR1-211ENST00000444719 SMARCC1Q92922 1105 aaPredicted RBP30.1■■■□□ 2.41
LMBR1-211ENST00000444719 TFCP2L1Q9NZI6 479 aa30.1■■■□□ 2.41
LMBR1-211ENST00000444719 TAF1LQ8IZX4 1826 aa30.1■■■□□ 2.41
LMBR1-211ENST00000444719 C5P01031 1676 aa30.09■■■□□ 2.41
LMBR1-211ENST00000444719 HSP90AB1P08238 724 aaKnown RBP30.09■■■□□ 2.41
LMBR1-211ENST00000444719 C1orf141Q5JVX7 400 aa30.09■■■□□ 2.41
LMBR1-211ENST00000444719 DCAF5Q96JK2 942 aa30.08■■■□□ 2.41
LMBR1-211ENST00000444719 ASAP1Q9ULH1 1129 aa30.08■■■□□ 2.41
LMBR1-211ENST00000444719 QSER1Q2KHR3 1735 aa30.08■■■□□ 2.41
LMBR1-211ENST00000444719 U2SURPO15042 1029 aaKnown RBP30.06■■■□□ 2.4
LMBR1-211ENST00000444719 MTFR1LQ9H019 292 aa30.06■■■□□ 2.4
LMBR1-211ENST00000444719 COL3A1P02461 1466 aaPredicted RBP30.06■■■□□ 2.4
LMBR1-211ENST00000444719 KDM6AO15550 1401 aaPredicted RBP30.05■■■□□ 2.4
LMBR1-211ENST00000444719 PNPLA7Q6ZV29 1317 aa30.04■■■□□ 2.4
LMBR1-211ENST00000444719 ERVV-2B6SEH9 535 aa30.04■■■□□ 2.4
LMBR1-211ENST00000444719 PTGER2P43116 358 aa30.03■■■□□ 2.4
LMBR1-211ENST00000444719 ATG3Q9NT62 314 aa30.03■■■□□ 2.4
LMBR1-211ENST00000444719 PPP2R1AP30153 589 aa30.02■■■□□ 2.4
LMBR1-211ENST00000444719 CABP4P57796 275 aa30.02■■■□□ 2.4
LMBR1-211ENST00000444719 LOC102724428A0A0B4J2F2 783 aa30.01■■■□□ 2.39
LMBR1-211ENST00000444719 SIK1P57059 783 aa30.01■■■□□ 2.39
LMBR1-211ENST00000444719 CFAP53Q96M91 514 aa30.01■■■□□ 2.39
LMBR1-211ENST00000444719 SCN11AQ9UI33 1791 aa30■■■□□ 2.39
LMBR1-211ENST00000444719 VIRMAQ69YN4 1812 aaKnown RBP30■■■□□ 2.39
LMBR1-211ENST00000444719 MSH5O43196 834 aa29.99■■■□□ 2.39
LMBR1-211ENST00000444719 AKAP4Q5JQC9 854 aa29.98■■■□□ 2.39
LMBR1-211ENST00000444719 C4BP0C0L5 1744 aa29.98■■■□□ 2.39
LMBR1-211ENST00000444719 MTHFSDQ2M296 383 aaKnown RBP29.97■■■□□ 2.39
LMBR1-211ENST00000444719 ATP6V1AP38606 617 aa29.96■■■□□ 2.39
LMBR1-211ENST00000444719 COL23A1Q86Y22 540 aaPredicted RBP29.96■■■□□ 2.39
LMBR1-211ENST00000444719 NFATC2IPQ8NCF5 419 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms