RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 FAM208AQ9UK61 1670 aaKnown RBP18.44■□□□□ 0.54
GARNL3-208ENST00000444677 BCL9O00512 1426 aa18.43■□□□□ 0.54
GARNL3-208ENST00000444677 PSDA5PKW4 1024 aaPredicted RBP18.42■□□□□ 0.54
GARNL3-208ENST00000444677 RGPD3A6NKT7 1758 aaPredicted RBP18.42■□□□□ 0.54
GARNL3-208ENST00000444677 RGPD4Q7Z3J3 1758 aa18.42■□□□□ 0.54
GARNL3-208ENST00000444677 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
GARNL3-208ENST00000444677 MTHFSP49914 203 aa18.41■□□□□ 0.54
GARNL3-208ENST00000444677 IL13P35225 146 aa18.39■□□□□ 0.53
GARNL3-208ENST00000444677 PROM2Q8N271 834 aa18.39■□□□□ 0.53
GARNL3-208ENST00000444677 NPC1L1Q9UHC9 1359 aa18.39■□□□□ 0.53
GARNL3-208ENST00000444677 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
GARNL3-208ENST00000444677 PLSCR1O15162 318 aa18.38■□□□□ 0.53
GARNL3-208ENST00000444677 CYP27B1O15528 508 aa18.38■□□□□ 0.53
GARNL3-208ENST00000444677 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
GARNL3-208ENST00000444677 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
GARNL3-208ENST00000444677 ANKRD26Q9UPS8 1709 aa18.37■□□□□ 0.53
GARNL3-208ENST00000444677 SRCAPQ6ZRS2 3230 aa18.37■□□□□ 0.53
GARNL3-208ENST00000444677 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
GARNL3-208ENST00000444677 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
GARNL3-208ENST00000444677 NHSQ6T4R5 1651 aa18.35■□□□□ 0.53
GARNL3-208ENST00000444677 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
GARNL3-208ENST00000444677 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
GARNL3-208ENST00000444677 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
GARNL3-208ENST00000444677 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
GARNL3-208ENST00000444677 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
GARNL3-208ENST00000444677 TXNRD1Q16881 649 aa18.33■□□□□ 0.52
GARNL3-208ENST00000444677 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.52
GARNL3-208ENST00000444677 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
GARNL3-208ENST00000444677 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
GARNL3-208ENST00000444677 SPG7Q9UQ90 795 aa18.32■□□□□ 0.52
GARNL3-208ENST00000444677 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
GARNL3-208ENST00000444677 KAT6BQ8WYB5 2073 aa18.31■□□□□ 0.52
GARNL3-208ENST00000444677 ANO8Q9HCE9 1232 aaPredicted RBP18.31■□□□□ 0.52
GARNL3-208ENST00000444677 BTAF1O14981 1849 aa18.3■□□□□ 0.52
GARNL3-208ENST00000444677 DIAPH1O60610 1272 aaKnown RBP18.3■□□□□ 0.52
GARNL3-208ENST00000444677 HMOX1P09601 288 aa18.3■□□□□ 0.52
GARNL3-208ENST00000444677 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
GARNL3-208ENST00000444677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
GARNL3-208ENST00000444677 PHKG2P15735 406 aa18.29■□□□□ 0.52
GARNL3-208ENST00000444677 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-208ENST00000444677 DOT1LQ8TEK3 1739 aa18.29■□□□□ 0.52
GARNL3-208ENST00000444677 KCNQ4P56696 695 aa18.28■□□□□ 0.52
GARNL3-208ENST00000444677 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
GARNL3-208ENST00000444677 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
GARNL3-208ENST00000444677 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
GARNL3-208ENST00000444677 PLEKHO1Q53GL0 409 aaPredicted RBP18.27■□□□□ 0.52
GARNL3-208ENST00000444677 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.52
GARNL3-208ENST00000444677 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
GARNL3-208ENST00000444677 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
GARNL3-208ENST00000444677 PIGBQ92521 554 aa18.25■□□□□ 0.51
GARNL3-208ENST00000444677 KDRP35968 1356 aa18.25■□□□□ 0.51
GARNL3-208ENST00000444677 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-208ENST00000444677 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
GARNL3-208ENST00000444677 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
GARNL3-208ENST00000444677 PDGFDQ9GZP0 370 aaPredicted RBP18.23■□□□□ 0.51
GARNL3-208ENST00000444677 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
GARNL3-208ENST00000444677 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
GARNL3-208ENST00000444677 CFAP53Q96M91 514 aa18.21■□□□□ 0.51
GARNL3-208ENST00000444677 STK32BQ9NY57 414 aa18.21■□□□□ 0.51
GARNL3-208ENST00000444677 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
GARNL3-208ENST00000444677 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
GARNL3-208ENST00000444677 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
GARNL3-208ENST00000444677 PAPPAQ13219 1627 aa18.19■□□□□ 0.5
GARNL3-208ENST00000444677 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 C1orf141Q5JVX7 400 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 SLC27A3Q5K4L6 730 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 DCAF5Q96JK2 942 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
GARNL3-208ENST00000444677 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
GARNL3-208ENST00000444677 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
GARNL3-208ENST00000444677 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
GARNL3-208ENST00000444677 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
GARNL3-208ENST00000444677 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
GARNL3-208ENST00000444677 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
GARNL3-208ENST00000444677 ATG3Q9NT62 314 aa18.16■□□□□ 0.5
GARNL3-208ENST00000444677 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
GARNL3-208ENST00000444677 LY75O60449 1722 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 ERVV-2B6SEH9 535 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
GARNL3-208ENST00000444677 CABP4P57796 275 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
GARNL3-208ENST00000444677 PHACTR3Q96KR7 559 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
GARNL3-208ENST00000444677 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
GARNL3-208ENST00000444677 RALBP1Q15311 655 aa18.14■□□□□ 0.49
GARNL3-208ENST00000444677 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
GARNL3-208ENST00000444677 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
GARNL3-208ENST00000444677 ZBTB7AO95365 584 aa18.13■□□□□ 0.49
GARNL3-208ENST00000444677 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
GARNL3-208ENST00000444677 ITGB4P16144 1822 aa18.12■□□□□ 0.49
GARNL3-208ENST00000444677 ZNF316A6NFI3 1004 aaPredicted RBP18.12■□□□□ 0.49
GARNL3-208ENST00000444677 LOC102724428A0A0B4J2F2 783 aa18.11■□□□□ 0.49
GARNL3-208ENST00000444677 SIK1P57059 783 aa18.11■□□□□ 0.49
GARNL3-208ENST00000444677 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
GARNL3-208ENST00000444677 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
GARNL3-208ENST00000444677 ATF5Q9Y2D1 282 aaPredicted RBP18.11■□□□□ 0.49
GARNL3-208ENST00000444677 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms