RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
HDAC8-215ENST00000444609 C9orf131Q5VYM1 1079 aa15.2■□□□□ 0.02
HDAC8-215ENST00000444609 KCNH5Q8NCM2 988 aa15.19■□□□□ 0.02
HDAC8-215ENST00000444609 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
HDAC8-215ENST00000444609 PLEKHG2Q9H7P9 1386 aa15.19■□□□□ 0.02
HDAC8-215ENST00000444609 SYTL4Q96C24 671 aaPredicted RBP15.18■□□□□ 0.02
HDAC8-215ENST00000444609 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
HDAC8-215ENST00000444609 PXDNLA1KZ92 1463 aa15.17■□□□□ 0.02
HDAC8-215ENST00000444609 CTCFP49711 727 aaPredicted RBP15.17■□□□□ 0.02
HDAC8-215ENST00000444609 NLRP2Q9NX02 1062 aa15.17■□□□□ 0.02
HDAC8-215ENST00000444609 NSD2O96028 1365 aa15.16■□□□□ 0.02
HDAC8-215ENST00000444609 ANKRD36BQ8N2N9 1353 aa15.16■□□□□ 0.02
HDAC8-215ENST00000444609 DDX54Q8TDD1 881 aaKnown RBP15.16■□□□□ 0.02
HDAC8-215ENST00000444609 SOX12O15370 315 aa15.14■□□□□ 0.01
HDAC8-215ENST00000444609 TGFB2P61812 414 aa15.14■□□□□ 0.01
HDAC8-215ENST00000444609 ERBB3P21860 1342 aa15.14■□□□□ 0.01
HDAC8-215ENST00000444609 HMGB2P26583 209 aaKnown RBP15.13■□□□□ 0.01
HDAC8-215ENST00000444609 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
HDAC8-215ENST00000444609 A0A0G2JLW4 131 aa15.12■□□□□ 0.01
HDAC8-215ENST00000444609 MKRN1Q9UHC7 482 aaKnown RBP15.12■□□□□ 0.01
HDAC8-215ENST00000444609 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 FCHSD2O94868 740 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 LBX1P52954 281 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 SMIM5Q71RC9 77 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 LY75O60449 1722 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 USP47Q96K76 1375 aa15.11■□□□□ 0.01
HDAC8-215ENST00000444609 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
HDAC8-215ENST00000444609 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
HDAC8-215ENST00000444609 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
HDAC8-215ENST00000444609 CABP1Q9NZU7 370 aa15.09■□□□□ 0.01
HDAC8-215ENST00000444609 RNF181Q9P0P0 153 aa15.09■□□□□ 0.01
HDAC8-215ENST00000444609 PIK3C2AO00443 1686 aa15.09■□□□□ 0.01
HDAC8-215ENST00000444609 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
HDAC8-215ENST00000444609 RGPD5Q99666 1765 aa15.08■□□□□ 0.01
HDAC8-215ENST00000444609 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0
HDAC8-215ENST00000444609 CABP2Q9NPB3 220 aa15.07■□□□□ 0
HDAC8-215ENST00000444609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
HDAC8-215ENST00000444609 DPEP1P16444 411 aa15.06■□□□□ 0
HDAC8-215ENST00000444609 AK7Q96M32 723 aa15.06■□□□□ 0
HDAC8-215ENST00000444609 WBP1LQ9NX94 342 aa15.06■□□□□ 0
HDAC8-215ENST00000444609 PHF14O94880 888 aa15.05■□□□□ -0
HDAC8-215ENST00000444609 ANKRD24Q8TF21 1146 aa15.05■□□□□ -0
HDAC8-215ENST00000444609 KDM2AQ9Y2K7 1162 aa15.05■□□□□ -0
HDAC8-215ENST00000444609 TTC21BQ7Z4L5 1316 aa15.04■□□□□ -0
HDAC8-215ENST00000444609 MMP10P09238 476 aa15.04■□□□□ -0
HDAC8-215ENST00000444609 USP54Q70EL1 1684 aa15.03■□□□□ -0
HDAC8-215ENST00000444609 NFAT5O94916 1531 aa15.03■□□□□ -0
HDAC8-215ENST00000444609 CNTNAP1P78357 1384 aa15.03■□□□□ -0
HDAC8-215ENST00000444609 HSPA8P11142 646 aaKnown RBP15.03■□□□□ -0
HDAC8-215ENST00000444609 SSFA2P28290 1259 aa15.03■□□□□ -0
HDAC8-215ENST00000444609 DCAF5Q96JK2 942 aa15.03■□□□□ -0
HDAC8-215ENST00000444609 TNRC6CQ9HCJ0 1690 aaKnown RBP15.03■□□□□ -0
HDAC8-215ENST00000444609 GLTPD2A6NH11 291 aa15.02■□□□□ -0
HDAC8-215ENST00000444609 KCNA3P22001 575 aa15.02■□□□□ -0
HDAC8-215ENST00000444609 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
HDAC8-215ENST00000444609 QRICH2Q9H0J4 1663 aa15.01□□□□□ -0.01
HDAC8-215ENST00000444609 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
HDAC8-215ENST00000444609 VEGFBP49765 207 aa15□□□□□ -0.01
HDAC8-215ENST00000444609 STAC3Q96MF2 364 aa15□□□□□ -0.01
HDAC8-215ENST00000444609 KIAA1551Q9HCM1 1747 aa15□□□□□ -0.01
HDAC8-215ENST00000444609 NSD3Q9BZ95 1437 aa15□□□□□ -0.01
HDAC8-215ENST00000444609 TTC21AQ8NDW8 1320 aa14.99□□□□□ -0.01
HDAC8-215ENST00000444609 ZCRB1Q8TBF4 217 aaKnown RBP14.99□□□□□ -0.01
HDAC8-215ENST00000444609 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
HDAC8-215ENST00000444609 PIM2Q9P1W9 311 aa14.99□□□□□ -0.01
HDAC8-215ENST00000444609 C5P01031 1676 aa14.99□□□□□ -0.01
HDAC8-215ENST00000444609 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
HDAC8-215ENST00000444609 PKD1L3Q7Z443 1732 aa14.98□□□□□ -0.01
HDAC8-215ENST00000444609 POTECB2RU33 542 aa14.98□□□□□ -0.01
HDAC8-215ENST00000444609 DALRD3Q5D0E6 543 aaKnown RBP14.98□□□□□ -0.01
HDAC8-215ENST00000444609 CCDC87Q9NVE4 849 aa14.97□□□□□ -0.01
HDAC8-215ENST00000444609 DOT1LQ8TEK3 1739 aa14.97□□□□□ -0.01
HDAC8-215ENST00000444609 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-215ENST00000444609 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
HDAC8-215ENST00000444609 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
HDAC8-215ENST00000444609 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
HDAC8-215ENST00000444609 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
HDAC8-215ENST00000444609 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
HDAC8-215ENST00000444609 PPARGC1BQ86YN6 1023 aaKnown RBP14.94□□□□□ -0.02
HDAC8-215ENST00000444609 SMARCC1Q92922 1105 aaPredicted RBP14.93□□□□□ -0.02
HDAC8-215ENST00000444609 CFAP44Q96MT7 982 aa14.93□□□□□ -0.02
HDAC8-215ENST00000444609 KDM6AO15550 1401 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-215ENST00000444609 TMF1P82094 1093 aa14.92□□□□□ -0.02
HDAC8-215ENST00000444609 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-215ENST00000444609 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
HDAC8-215ENST00000444609 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
HDAC8-215ENST00000444609 USP31Q70CQ4 1352 aa14.91□□□□□ -0.02
HDAC8-215ENST00000444609 GNPATO15228 680 aa14.91□□□□□ -0.02
HDAC8-215ENST00000444609 LMNB1P20700 586 aa14.91□□□□□ -0.02
HDAC8-215ENST00000444609 RASSF7Q02833 373 aa14.9□□□□□ -0.02
HDAC8-215ENST00000444609 PRPF38BQ5VTL8 546 aaKnown RBP14.9□□□□□ -0.02
HDAC8-215ENST00000444609 UBR3Q6ZT12 1888 aa14.9□□□□□ -0.02
HDAC8-215ENST00000444609 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
HDAC8-215ENST00000444609 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-215ENST00000444609 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
HDAC8-215ENST00000444609 TNRC18O15417 2968 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-215ENST00000444609 TMEM88BA6NKF7 163 aa14.89□□□□□ -0.03
HDAC8-215ENST00000444609 IP6K1Q92551 441 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms