RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LRRC37A3O60309 1634 aa18.83■□□□□ 0.61
SSBP3-208ENST00000444533 SOCS7O14512 581 aa18.83■□□□□ 0.6
SSBP3-208ENST00000444533 NEFMP07197 916 aa18.83■□□□□ 0.6
SSBP3-208ENST00000444533 CCDC125Q86Z20 511 aa18.83■□□□□ 0.6
SSBP3-208ENST00000444533 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
SSBP3-208ENST00000444533 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-208ENST00000444533 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSBP3-208ENST00000444533 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
SSBP3-208ENST00000444533 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-208ENST00000444533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.6
SSBP3-208ENST00000444533 MEGF6O75095 1541 aa18.82■□□□□ 0.6
SSBP3-208ENST00000444533 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
SSBP3-208ENST00000444533 HMOX1P09601 288 aa18.81■□□□□ 0.6
SSBP3-208ENST00000444533 FAM182BQ5T319 152 aa18.81■□□□□ 0.6
SSBP3-208ENST00000444533 PNNQ9H307 717 aaKnown RBP18.81■□□□□ 0.6
SSBP3-208ENST00000444533 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-208ENST00000444533 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSBP3-208ENST00000444533 MARCH10Q8NA82 808 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-208ENST00000444533 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
SSBP3-208ENST00000444533 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
SSBP3-208ENST00000444533 KDRP35968 1356 aa18.78■□□□□ 0.6
SSBP3-208ENST00000444533 FCHSD2O94868 740 aa18.76■□□□□ 0.59
SSBP3-208ENST00000444533 HSP90AB1P08238 724 aaKnown RBP18.76■□□□□ 0.59
SSBP3-208ENST00000444533 IFNL2Q8IZJ0 200 aa18.76■□□□□ 0.59
SSBP3-208ENST00000444533 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
SSBP3-208ENST00000444533 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
SSBP3-208ENST00000444533 TRIM37O94972 964 aa18.75■□□□□ 0.59
SSBP3-208ENST00000444533 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
SSBP3-208ENST00000444533 BCL9O00512 1426 aa18.74■□□□□ 0.59
SSBP3-208ENST00000444533 BAG6P46379 1132 aa18.73■□□□□ 0.59
SSBP3-208ENST00000444533 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
SSBP3-208ENST00000444533 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
SSBP3-208ENST00000444533 GAS2L2Q8NHY3 880 aa18.72■□□□□ 0.59
SSBP3-208ENST00000444533 BCL11BQ9C0K0 894 aaPredicted RBP18.72■□□□□ 0.59
SSBP3-208ENST00000444533 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
SSBP3-208ENST00000444533 PKD1L3Q7Z443 1732 aa18.71■□□□□ 0.59
SSBP3-208ENST00000444533 CYP27B1O15528 508 aa18.71■□□□□ 0.59
SSBP3-208ENST00000444533 PHKG2P15735 406 aa18.71■□□□□ 0.59
SSBP3-208ENST00000444533 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
SSBP3-208ENST00000444533 APBA3O96018 575 aa18.7■□□□□ 0.58
SSBP3-208ENST00000444533 DIEXFQ68CQ4 756 aaKnown RBP18.7■□□□□ 0.58
SSBP3-208ENST00000444533 RSPH6AQ9H0K4 717 aa18.7■□□□□ 0.58
SSBP3-208ENST00000444533 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
SSBP3-208ENST00000444533 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
SSBP3-208ENST00000444533 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
SSBP3-208ENST00000444533 NKX1-1Q15270 411 aaPredicted RBP18.68■□□□□ 0.58
SSBP3-208ENST00000444533 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
SSBP3-208ENST00000444533 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
SSBP3-208ENST00000444533 EP400Q96L91 3159 aa18.67■□□□□ 0.58
SSBP3-208ENST00000444533 MTHFSDQ2M296 383 aaKnown RBP18.66■□□□□ 0.58
SSBP3-208ENST00000444533 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
SSBP3-208ENST00000444533 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
SSBP3-208ENST00000444533 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
SSBP3-208ENST00000444533 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
SSBP3-208ENST00000444533 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
SSBP3-208ENST00000444533 KCNQ2O43526 872 aa18.64■□□□□ 0.57
SSBP3-208ENST00000444533 CABP4P57796 275 aa18.64■□□□□ 0.57
SSBP3-208ENST00000444533 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
SSBP3-208ENST00000444533 HMGB2P26583 209 aaKnown RBP18.63■□□□□ 0.57
SSBP3-208ENST00000444533 MAP3K5Q99683 1374 aa18.63■□□□□ 0.57
SSBP3-208ENST00000444533 NHSQ6T4R5 1651 aa18.63■□□□□ 0.57
SSBP3-208ENST00000444533 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
SSBP3-208ENST00000444533 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
SSBP3-208ENST00000444533 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
SSBP3-208ENST00000444533 DOT1LQ8TEK3 1739 aa18.61■□□□□ 0.57
SSBP3-208ENST00000444533 PLSCR1O15162 318 aa18.61■□□□□ 0.57
SSBP3-208ENST00000444533 EN1Q05925 392 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-208ENST00000444533 DEFB132Q7Z7B7 95 aa18.61■□□□□ 0.57
SSBP3-208ENST00000444533 SMARCC1Q92922 1105 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-208ENST00000444533 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
SSBP3-208ENST00000444533 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
SSBP3-208ENST00000444533 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
SSBP3-208ENST00000444533 TEFQ10587 303 aa18.59■□□□□ 0.57
SSBP3-208ENST00000444533 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
SSBP3-208ENST00000444533 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
SSBP3-208ENST00000444533 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
SSBP3-208ENST00000444533 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
SSBP3-208ENST00000444533 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
SSBP3-208ENST00000444533 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
SSBP3-208ENST00000444533 EZH2Q15910 746 aaKnown RBP18.56■□□□□ 0.56
SSBP3-208ENST00000444533 CCDC184Q52MB2 194 aa18.56■□□□□ 0.56
SSBP3-208ENST00000444533 PTF1AQ7RTS3 328 aa18.56■□□□□ 0.56
SSBP3-208ENST00000444533 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
SSBP3-208ENST00000444533 PIGBQ92521 554 aa18.56■□□□□ 0.56
SSBP3-208ENST00000444533 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
SSBP3-208ENST00000444533 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
SSBP3-208ENST00000444533 RIPK4P57078 832 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 NBPF14Q5TI25 921 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 CAMKK2Q96RR4 588 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 LGR6Q9HBX8 967 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 BTAF1O14981 1849 aa18.55■□□□□ 0.56
SSBP3-208ENST00000444533 SLC27A3Q5K4L6 730 aa18.54■□□□□ 0.56
SSBP3-208ENST00000444533 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
SSBP3-208ENST00000444533 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
SSBP3-208ENST00000444533 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
SSBP3-208ENST00000444533 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
SSBP3-208ENST00000444533 PALLDQ8WX93 1383 aa18.53■□□□□ 0.56
SSBP3-208ENST00000444533 TTC5Q8N0Z6 440 aa18.52■□□□□ 0.56
SSBP3-208ENST00000444533 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms