RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, humanhuman

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-204ENST00000444523 HSP90AB2PQ58FF8 381 aa33.86■■■■□ 3.01
CCDC117-204ENST00000444523 ATF5Q9Y2D1 282 aaPredicted RBP33.86■■■■□ 3.01
CCDC117-204ENST00000444523 NSD2O96028 1365 aa33.85■■■■□ 3.01
CCDC117-204ENST00000444523 ZNF827Q17R98 1081 aa33.85■■■■□ 3.01
CCDC117-204ENST00000444523 NSD3Q9BZ95 1437 aa33.85■■■■□ 3.01
CCDC117-204ENST00000444523 ZCRB1Q8TBF4 217 aaKnown RBP33.84■■■■□ 3.01
CCDC117-204ENST00000444523 INSRP06213 1382 aa33.83■■■■□ 3.01
CCDC117-204ENST00000444523 PRIM1P49642 420 aaKnown RBP33.82■■■■□ 3
CCDC117-204ENST00000444523 SGIP1Q9BQI5 828 aa33.82■■■■□ 3
CCDC117-204ENST00000444523 LY75O60449 1722 aa33.81■■■■□ 3
CCDC117-204ENST00000444523 FLT4P35916 1363 aa33.79■■■■□ 3
CCDC117-204ENST00000444523 AKT1S1Q96B36 256 aa33.78■■■■□ 3
CCDC117-204ENST00000444523 EMILIN1Q9Y6C2 1016 aa33.78■■■■□ 3
CCDC117-204ENST00000444523 TUBGCP6Q96RT7 1819 aa33.78■■■■□ 3
CCDC117-204ENST00000444523 KIF24Q5T7B8 1368 aa33.77■■■■□ 3
CCDC117-204ENST00000444523 ANKRD26Q9UPS8 1709 aa33.76■■■■□ 3
CCDC117-204ENST00000444523 KCNQ4P56696 695 aa33.76■■■□□ 2.99
CCDC117-204ENST00000444523 MTFR1LQ9H019 292 aa33.76■■■□□ 2.99
CCDC117-204ENST00000444523 QSER1Q2KHR3 1735 aa33.76■■■□□ 2.99
CCDC117-204ENST00000444523 MAP2P11137 1827 aaKnown RBP33.75■■■□□ 2.99
CCDC117-204ENST00000444523 SYTL4Q96C24 671 aaPredicted RBP33.75■■■□□ 2.99
CCDC117-204ENST00000444523 SMG6Q86US8 1419 aaKnown RBP33.75■■■□□ 2.99
CCDC117-204ENST00000444523 SLC27A3Q5K4L6 730 aa33.73■■■□□ 2.99
CCDC117-204ENST00000444523 CGNL1Q0VF96 1302 aa33.73■■■□□ 2.99
CCDC117-204ENST00000444523 RAPGEF4Q8WZA2 1011 aa33.71■■■□□ 2.99
CCDC117-204ENST00000444523 NCAPD2Q15021 1401 aa33.7■■■□□ 2.99
CCDC117-204ENST00000444523 TATP17735 454 aaPredicted RBP33.69■■■□□ 2.98
CCDC117-204ENST00000444523 COL24A1Q17RW2 1714 aa33.68■■■□□ 2.98
CCDC117-204ENST00000444523 FHDC1Q9C0D6 1143 aaPredicted RBP33.67■■■□□ 2.98
CCDC117-204ENST00000444523 PKD1L3Q7Z443 1732 aa33.67■■■□□ 2.98
CCDC117-204ENST00000444523 TOGARAM1Q9Y4F4 1720 aa33.67■■■□□ 2.98
CCDC117-204ENST00000444523 CYP27B1O15528 508 aa33.66■■■□□ 2.98
CCDC117-204ENST00000444523 PNPLA7Q6ZV29 1317 aa33.66■■■□□ 2.98
CCDC117-204ENST00000444523 SYT17Q9BSW7 474 aa33.65■■■□□ 2.98
CCDC117-204ENST00000444523 HSPA5P11021 654 aaKnown RBP33.64■■■□□ 2.98
CCDC117-204ENST00000444523 ITGB4P16144 1822 aa33.64■■■□□ 2.98
CCDC117-204ENST00000444523 WASHC2AQ641Q2 1341 aa33.63■■■□□ 2.97
CCDC117-204ENST00000444523 POLR3GLQ9BT43 218 aa33.62■■■□□ 2.97
CCDC117-204ENST00000444523 POLKQ9UBT6 870 aa33.62■■■□□ 2.97
CCDC117-204ENST00000444523 PCDH11XQ9BZA7 1347 aa33.61■■■□□ 2.97
CCDC117-204ENST00000444523 PCDH11YQ9BZA8 1340 aa33.61■■■□□ 2.97
CCDC117-204ENST00000444523 PPM1GO15355 546 aaPredicted RBP33.61■■■□□ 2.97
CCDC117-204ENST00000444523 YY1P25490 414 aa33.61■■■□□ 2.97
CCDC117-204ENST00000444523 ARXQ96QS3 562 aa33.6■■■□□ 2.97
CCDC117-204ENST00000444523 CCNL1Q9UK58 526 aaPredicted RBP33.59■■■□□ 2.97
CCDC117-204ENST00000444523 EIF4G2P78344 907 aaKnown RBP eCLIP33.58■■■□□ 2.97
CCDC117-204ENST00000444523 EYA1Q99502 592 aa33.58■■■□□ 2.97
CCDC117-204ENST00000444523 TAF1LQ8IZX4 1826 aa33.57■■■□□ 2.96
CCDC117-204ENST00000444523 SLC16A10Q8TF71 515 aa33.56■■■□□ 2.96
CCDC117-204ENST00000444523 TFCP2L1Q9NZI6 479 aa33.56■■■□□ 2.96
CCDC117-204ENST00000444523 C5P01031 1676 aa33.55■■■□□ 2.96
CCDC117-204ENST00000444523 MAP3K5Q99683 1374 aa33.54■■■□□ 2.96
CCDC117-204ENST00000444523 PANK3Q9H999 370 aa33.53■■■□□ 2.96
CCDC117-204ENST00000444523 DCAF8L1A6NGE4 600 aa33.52■■■□□ 2.96
CCDC117-204ENST00000444523 NKX1-1Q15270 411 aaPredicted RBP33.52■■■□□ 2.96
CCDC117-204ENST00000444523 TNNT2P45379 298 aaPredicted RBP33.51■■■□□ 2.95
CCDC117-204ENST00000444523 MPRIPQ6WCQ1 1025 aa33.51■■■□□ 2.95
CCDC117-204ENST00000444523 UTRNP46939 3433 aa33.5■■■□□ 2.95
CCDC117-204ENST00000444523 EIF4A2Q14240 407 aaKnown RBP33.5■■■□□ 2.95
CCDC117-204ENST00000444523 PALLDQ8WX93 1383 aa33.49■■■□□ 2.95
CCDC117-204ENST00000444523 COL23A1Q86Y22 540 aaPredicted RBP33.49■■■□□ 2.95
CCDC117-204ENST00000444523 PIGBQ92521 554 aa33.47■■■□□ 2.95
CCDC117-204ENST00000444523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.44■■■□□ 2.94
CCDC117-204ENST00000444523 SPG7Q9UQ90 795 aa33.44■■■□□ 2.94
CCDC117-204ENST00000444523 CHD4Q14839 1912 aa33.43■■■□□ 2.94
CCDC117-204ENST00000444523 C4BP0C0L5 1744 aa33.42■■■□□ 2.94
CCDC117-204ENST00000444523 POLD1P28340 1107 aa33.41■■■□□ 2.94
CCDC117-204ENST00000444523 AMIGO3Q86WK7 504 aa33.41■■■□□ 2.94
CCDC117-204ENST00000444523 PHKG2P15735 406 aa33.4■■■□□ 2.94
CCDC117-204ENST00000444523 UBR3Q6ZT12 1888 aa33.39■■■□□ 2.94
CCDC117-204ENST00000444523 IGSF1Q8N6C5 1336 aa33.39■■■□□ 2.94
CCDC117-204ENST00000444523 SMARCC1Q92922 1105 aaPredicted RBP33.38■■■□□ 2.93
CCDC117-204ENST00000444523 SMIM5Q71RC9 77 aa33.36■■■□□ 2.93
CCDC117-204ENST00000444523 IFNL2Q8IZJ0 200 aa33.36■■■□□ 2.93
CCDC117-204ENST00000444523 NLGN2Q8NFZ4 835 aa33.36■■■□□ 2.93
CCDC117-204ENST00000444523 MSH5O43196 834 aa33.35■■■□□ 2.93
CCDC117-204ENST00000444523 MSL1Q68DK7 614 aa33.35■■■□□ 2.93
CCDC117-204ENST00000444523 KLHL34Q8N239 644 aa33.35■■■□□ 2.93
CCDC117-204ENST00000444523 ASAP1Q9ULH1 1129 aa33.34■■■□□ 2.93
CCDC117-204ENST00000444523 LOC102724428A0A0B4J2F2 783 aa33.31■■■□□ 2.92
CCDC117-204ENST00000444523 SIK1P57059 783 aa33.31■■■□□ 2.92
CCDC117-204ENST00000444523 LINC00116Q8NCU8 138 aa33.31■■■□□ 2.92
CCDC117-204ENST00000444523 TMOD3Q9NYL9 352 aa33.31■■■□□ 2.92
CCDC117-204ENST00000444523 PLEKHG2Q9H7P9 1386 aa33.31■■■□□ 2.92
CCDC117-204ENST00000444523 MORC1Q86VD1 984 aa33.3■■■□□ 2.92
CCDC117-204ENST00000444523 ITPK1Q13572 414 aa33.29■■■□□ 2.92
CCDC117-204ENST00000444523 ATG3Q9NT62 314 aa33.29■■■□□ 2.92
CCDC117-204ENST00000444523 AEBP1Q8IUX7 1158 aa33.28■■■□□ 2.92
CCDC117-204ENST00000444523 ZNF784Q8NCA9 323 aaPredicted RBP33.28■■■□□ 2.92
CCDC117-204ENST00000444523 GOLGB1Q14789 3259 aaKnown RBP33.27■■■□□ 2.92
CCDC117-204ENST00000444523 AMER1Q5JTC6 1135 aaPredicted RBP33.27■■■□□ 2.92
CCDC117-204ENST00000444523 FLAD1Q8NFF5 587 aa33.27■■■□□ 2.92
CCDC117-204ENST00000444523 KIF7Q2M1P5 1343 aa33.27■■■□□ 2.92
CCDC117-204ENST00000444523 GPR162Q16538 588 aa33.26■■■□□ 2.91
CCDC117-204ENST00000444523 AK7Q96M32 723 aa33.25■■■□□ 2.91
CCDC117-204ENST00000444523 KDM6AO15550 1401 aaPredicted RBP33.25■■■□□ 2.91
CCDC117-204ENST00000444523 KNSTRNQ9Y448 316 aa33.24■■■□□ 2.91
CCDC117-204ENST00000444523 SLC4A9Q96Q91 983 aa33.23■■■□□ 2.91
CCDC117-204ENST00000444523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.22■■■□□ 2.91
CCDC117-204ENST00000444523 HMGB2P26583 209 aaKnown RBP33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms