RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
AP1S3-207ENST00000444408 BAG6P46379 1132 aa23.12■■□□□ 1.29
AP1S3-207ENST00000444408 DDX54Q8TDD1 881 aaKnown RBP23.12■■□□□ 1.29
AP1S3-207ENST00000444408 RALBP1Q15311 655 aa23.11■■□□□ 1.29
AP1S3-207ENST00000444408 SULT6B1Q6IMI4 303 aa23.11■■□□□ 1.29
AP1S3-207ENST00000444408 ZCRB1Q8TBF4 217 aaKnown RBP23.11■■□□□ 1.29
AP1S3-207ENST00000444408 HMOX1P09601 288 aa23.1■■□□□ 1.29
AP1S3-207ENST00000444408 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
AP1S3-207ENST00000444408 FAM196AQ6ZSG2 479 aa23.09■■□□□ 1.29
AP1S3-207ENST00000444408 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.29
AP1S3-207ENST00000444408 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
AP1S3-207ENST00000444408 TRIM37O94972 964 aa23.08■■□□□ 1.29
AP1S3-207ENST00000444408 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
AP1S3-207ENST00000444408 CFAP53Q96M91 514 aa23.08■■□□□ 1.29
AP1S3-207ENST00000444408 KDRP35968 1356 aa23.05■■□□□ 1.28
AP1S3-207ENST00000444408 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
AP1S3-207ENST00000444408 CYP27B1O15528 508 aa23.04■■□□□ 1.28
AP1S3-207ENST00000444408 ACSBG1Q96GR2 724 aa23.04■■□□□ 1.28
AP1S3-207ENST00000444408 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
AP1S3-207ENST00000444408 PKD1L3Q7Z443 1732 aa23.02■■□□□ 1.28
AP1S3-207ENST00000444408 KCNQ2O43526 872 aa23.02■■□□□ 1.28
AP1S3-207ENST00000444408 SPG7Q9UQ90 795 aa23■■□□□ 1.27
AP1S3-207ENST00000444408 PCDH11XQ9BZA7 1347 aa23■■□□□ 1.27
AP1S3-207ENST00000444408 PCDH11YQ9BZA8 1340 aa23■■□□□ 1.27
AP1S3-207ENST00000444408 BCL9O00512 1426 aa22.99■■□□□ 1.27
AP1S3-207ENST00000444408 U2AF1L5P0DN76 240 aaPredicted RBP22.99■■□□□ 1.27
AP1S3-207ENST00000444408 U2AF1Q01081 240 aaKnown RBP eCLIP22.99■■□□□ 1.27
AP1S3-207ENST00000444408 EN1Q05925 392 aaPredicted RBP22.99■■□□□ 1.27
AP1S3-207ENST00000444408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.27
AP1S3-207ENST00000444408 NUDCQ9Y266 331 aa22.98■■□□□ 1.27
AP1S3-207ENST00000444408 TNS1Q9HBL0 1735 aaKnown RBP22.98■■□□□ 1.27
AP1S3-207ENST00000444408 SBF2Q86WG5 1849 aa22.98■■□□□ 1.27
AP1S3-207ENST00000444408 PHKG2P15735 406 aa22.97■■□□□ 1.27
AP1S3-207ENST00000444408 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
AP1S3-207ENST00000444408 APBA3O96018 575 aa22.96■■□□□ 1.27
AP1S3-207ENST00000444408 CCDC184Q52MB2 194 aa22.96■■□□□ 1.27
AP1S3-207ENST00000444408 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
AP1S3-207ENST00000444408 ZNF530Q6P9A1 599 aaPredicted RBP22.95■■□□□ 1.26
AP1S3-207ENST00000444408 BCL11BQ9C0K0 894 aaPredicted RBP22.95■■□□□ 1.26
AP1S3-207ENST00000444408 PRKAR2BP31323 418 aa22.94■■□□□ 1.26
AP1S3-207ENST00000444408 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
AP1S3-207ENST00000444408 ANP32CO43423 234 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 MTHFSDQ2M296 383 aaKnown RBP22.93■■□□□ 1.26
AP1S3-207ENST00000444408 AMOTQ4VCS5 1084 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 SYTL4Q96C24 671 aaPredicted RBP22.93■■□□□ 1.26
AP1S3-207ENST00000444408 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 NHSQ6T4R5 1651 aa22.93■■□□□ 1.26
AP1S3-207ENST00000444408 R3HDM1Q15032 1099 aaKnown RBP22.92■■□□□ 1.26
AP1S3-207ENST00000444408 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
AP1S3-207ENST00000444408 PLEKHG2Q9H7P9 1386 aa22.91■■□□□ 1.26
AP1S3-207ENST00000444408 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
AP1S3-207ENST00000444408 EZH2Q15910 746 aaKnown RBP22.9■■□□□ 1.26
AP1S3-207ENST00000444408 FCHSD2O94868 740 aa22.88■■□□□ 1.25
AP1S3-207ENST00000444408 MPRIPQ6WCQ1 1025 aa22.88■■□□□ 1.25
AP1S3-207ENST00000444408 CAMKK2Q96RR4 588 aa22.88■■□□□ 1.25
AP1S3-207ENST00000444408 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
AP1S3-207ENST00000444408 KAT6BQ8WYB5 2073 aa22.87■■□□□ 1.25
AP1S3-207ENST00000444408 C1orf141Q5JVX7 400 aa22.87■■□□□ 1.25
AP1S3-207ENST00000444408 BTAF1O14981 1849 aa22.85■■□□□ 1.25
AP1S3-207ENST00000444408 PLEKHF1Q96S99 279 aa22.85■■□□□ 1.25
AP1S3-207ENST00000444408 AKAP4Q5JQC9 854 aa22.84■■□□□ 1.25
AP1S3-207ENST00000444408 LGR6Q9HBX8 967 aa22.84■■□□□ 1.25
AP1S3-207ENST00000444408 PROM2Q8N271 834 aa22.83■■□□□ 1.25
AP1S3-207ENST00000444408 PIGBQ92521 554 aa22.83■■□□□ 1.25
AP1S3-207ENST00000444408 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
AP1S3-207ENST00000444408 PLSCR1O15162 318 aa22.82■■□□□ 1.24
AP1S3-207ENST00000444408 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
AP1S3-207ENST00000444408 HSP90AB1P08238 724 aaKnown RBP22.81■■□□□ 1.24
AP1S3-207ENST00000444408 WDR43Q15061 677 aaKnown RBP eCLIP22.81■■□□□ 1.24
AP1S3-207ENST00000444408 CCDC146Q8IYE0 955 aa22.81■■□□□ 1.24
AP1S3-207ENST00000444408 GAS2L2Q8NHY3 880 aa22.81■■□□□ 1.24
AP1S3-207ENST00000444408 ITGB4P16144 1822 aa22.8■■□□□ 1.24
AP1S3-207ENST00000444408 RNMTO43148 476 aaKnown RBP22.8■■□□□ 1.24
AP1S3-207ENST00000444408 MAP3K5Q99683 1374 aa22.79■■□□□ 1.24
AP1S3-207ENST00000444408 KCNQ4P56696 695 aa22.79■■□□□ 1.24
AP1S3-207ENST00000444408 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
AP1S3-207ENST00000444408 TMOD3Q9NYL9 352 aa22.79■■□□□ 1.24
AP1S3-207ENST00000444408 ERVV-2B6SEH9 535 aa22.78■■□□□ 1.24
AP1S3-207ENST00000444408 TXNRD1Q16881 649 aa22.78■■□□□ 1.24
AP1S3-207ENST00000444408 IL17REQ8NFR9 667 aa22.78■■□□□ 1.24
AP1S3-207ENST00000444408 GNAT3A8MTJ3 354 aa22.77■■□□□ 1.24
AP1S3-207ENST00000444408 CABP4P57796 275 aa22.77■■□□□ 1.24
AP1S3-207ENST00000444408 NFATC2IPQ8NCF5 419 aa22.77■■□□□ 1.24
AP1S3-207ENST00000444408 ASAP1Q9ULH1 1129 aa22.77■■□□□ 1.24
AP1S3-207ENST00000444408 NBPF14Q5TI25 921 aa22.76■■□□□ 1.23
AP1S3-207ENST00000444408 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
AP1S3-207ENST00000444408 RREB1Q92766 1687 aa22.76■■□□□ 1.23
AP1S3-207ENST00000444408 DCTN1Q14203 1278 aa22.75■■□□□ 1.23
AP1S3-207ENST00000444408 SCN11AQ9UI33 1791 aa22.75■■□□□ 1.23
AP1S3-207ENST00000444408 ADAMTS7Q9UKP4 1686 aa22.74■■□□□ 1.23
AP1S3-207ENST00000444408 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
AP1S3-207ENST00000444408 PNISRQ8TF01 805 aaKnown RBP22.74■■□□□ 1.23
AP1S3-207ENST00000444408 ATG3Q9NT62 314 aa22.74■■□□□ 1.23
AP1S3-207ENST00000444408 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
AP1S3-207ENST00000444408 PALLDQ8WX93 1383 aa22.74■■□□□ 1.23
AP1S3-207ENST00000444408 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
AP1S3-207ENST00000444408 RGPD3A6NKT7 1758 aaPredicted RBP22.73■■□□□ 1.23
AP1S3-207ENST00000444408 RGPD4Q7Z3J3 1758 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms