RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 FERMT3Q86UX7 667 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 DCTPP1Q9H773 170 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 SMC3Q9UQE7 1217 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 NLRP6P59044 892 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 DIAPH3Q9NSV4 1193 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 LRRFIP2Q9Y608 721 aaKnown RBP14.1□□□□□ -0.15
HCFC1-203ENST00000444191 IQGAP3Q86VI3 1631 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 NSD2O96028 1365 aa14.1□□□□□ -0.15
HCFC1-203ENST00000444191 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 TPM2P07951 284 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 ANKRD44Q8N8A2 993 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
HCFC1-203ENST00000444191 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
HCFC1-203ENST00000444191 SPG7Q9UQ90 795 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
HCFC1-203ENST00000444191 KIF2CQ99661 725 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 NPATQ14207 1427 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 ATP7AQ04656 1500 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 CPA1P15085 419 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 MX1P20591 662 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
HCFC1-203ENST00000444191 PDE1AP54750 535 aa14.08□□□□□ -0.15
HCFC1-203ENST00000444191 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.15
HCFC1-203ENST00000444191 TRPM2O94759 1503 aa14.08□□□□□ -0.16
HCFC1-203ENST00000444191 ASXL2Q76L83 1435 aa14.08□□□□□ -0.16
HCFC1-203ENST00000444191 WASLO00401 505 aaPredicted RBP14.08□□□□□ -0.16
HCFC1-203ENST00000444191 C17orf53Q8N3J3 647 aaPredicted RBP14.08□□□□□ -0.16
HCFC1-203ENST00000444191 TSC1Q92574 1164 aa14.08□□□□□ -0.16
HCFC1-203ENST00000444191 CHAF1AQ13111 956 aaPredicted RBP14.07□□□□□ -0.16
HCFC1-203ENST00000444191 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 LMBRD1Q9NUN5 540 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 CCDC39Q9UFE4 941 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 NSFL1CQ9UNZ2 370 aaKnown RBP14.07□□□□□ -0.16
HCFC1-203ENST00000444191 SRGAP3O43295 1099 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 PHF14O94880 888 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 STK3Q13188 491 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 MBD3O95983 291 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 EIF4A2Q14240 407 aaKnown RBP14.07□□□□□ -0.16
HCFC1-203ENST00000444191 HDGFL1Q5TGJ6 251 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 ZNF592Q92610 1267 aa14.07□□□□□ -0.16
HCFC1-203ENST00000444191 C9orf78Q9NZ63 289 aaPredicted RBP14.07□□□□□ -0.16
HCFC1-203ENST00000444191 UNC13BO14795 1591 aa14.06□□□□□ -0.16
HCFC1-203ENST00000444191 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
HCFC1-203ENST00000444191 IL13P35225 146 aa14.06□□□□□ -0.16
HCFC1-203ENST00000444191 MSH6P52701 1360 aa14.06□□□□□ -0.16
HCFC1-203ENST00000444191 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
HCFC1-203ENST00000444191 CEBPZQ03701 1054 aaKnown RBP14.05□□□□□ -0.16
HCFC1-203ENST00000444191 CAMK4Q16566 473 aa14.05□□□□□ -0.16
HCFC1-203ENST00000444191 TCEANC2Q96MN5 208 aa14.05□□□□□ -0.16
HCFC1-203ENST00000444191 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
HCFC1-203ENST00000444191 SIL1Q9H173 461 aa14.05□□□□□ -0.16
HCFC1-203ENST00000444191 PALD1Q9ULE6 856 aa14.05□□□□□ -0.16
HCFC1-203ENST00000444191 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
HCFC1-203ENST00000444191 CCDC83Q8IWF9 413 aa14.05□□□□□ -0.16
HCFC1-203ENST00000444191 GNAI3P08754 354 aa14.04□□□□□ -0.16
HCFC1-203ENST00000444191 GPT2Q8TD30 523 aa14.04□□□□□ -0.16
HCFC1-203ENST00000444191 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
HCFC1-203ENST00000444191 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
HCFC1-203ENST00000444191 CCT4P50991 539 aaKnown RBP14.04□□□□□ -0.16
HCFC1-203ENST00000444191 TEFQ10587 303 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 FLIIQ13045 1269 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 CNPY2Q9Y2B0 182 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 IFIT2P09913 472 aaKnown RBP14.03□□□□□ -0.16
HCFC1-203ENST00000444191 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
HCFC1-203ENST00000444191 CCDC30Q5VVM6 783 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 ABCC1P33527 1531 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 PNMA6EA0A0J9YXQ4 647 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 GIMAP6Q6P9H5 292 aa14.03□□□□□ -0.16
HCFC1-203ENST00000444191 ZNF330Q9Y3S2 320 aaPredicted RBP14.02□□□□□ -0.16
HCFC1-203ENST00000444191 LRSAM1Q6UWE0 723 aa14.02□□□□□ -0.17
HCFC1-203ENST00000444191 USP48Q86UV5 1035 aa14.02□□□□□ -0.17
HCFC1-203ENST00000444191 AK9Q5TCS8 1911 aa14.02□□□□□ -0.17
HCFC1-203ENST00000444191 CSPP1Q1MSJ5 1256 aa14.02□□□□□ -0.17
HCFC1-203ENST00000444191 JAKMIP1Q96N16 626 aaKnown RBP14.02□□□□□ -0.17
HCFC1-203ENST00000444191 ESYT1Q9BSJ8 1104 aa14.02□□□□□ -0.17
HCFC1-203ENST00000444191 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
HCFC1-203ENST00000444191 MTHFSDQ2M296 383 aaKnown RBP14.01□□□□□ -0.17
HCFC1-203ENST00000444191 NECAB1Q8N987 351 aa14.01□□□□□ -0.17
HCFC1-203ENST00000444191 BICD2Q8TD16 824 aa14.01□□□□□ -0.17
HCFC1-203ENST00000444191 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
HCFC1-203ENST00000444191 ZRSR1Q15695 479 aaKnown RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 PRPF40BQ6NWY9 871 aaKnown RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 ABTB2Q8N961 1025 aa14□□□□□ -0.17
HCFC1-203ENST00000444191 WDR33Q9C0J8 1336 aaKnown RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 OFD1O75665 1012 aa14□□□□□ -0.17
HCFC1-203ENST00000444191 ABCC4O15439 1325 aa14□□□□□ -0.17
HCFC1-203ENST00000444191 ACEP12821 1306 aa14□□□□□ -0.17
HCFC1-203ENST00000444191 YTHDC2Q9H6S0 1430 aaKnown RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 A0A0G2JS52 829 aa14□□□□□ -0.17
HCFC1-203ENST00000444191 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 TFIP11Q9UBB9 837 aaKnown RBP14□□□□□ -0.17
HCFC1-203ENST00000444191 NPHP1O15259 732 aa13.99□□□□□ -0.17
HCFC1-203ENST00000444191 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
HCFC1-203ENST00000444191 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
HCFC1-203ENST00000444191 CKAP2LQ8IYA6 745 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms