RNA–Protein interactions for RNA: ENST00000443981.5

PTPRN-207, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 1,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-207ENST00000443981 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
PTPRN-207ENST00000443981 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
PTPRN-207ENST00000443981 ACSBG1Q96GR2 724 aa16.31■□□□□ 0.2
PTPRN-207ENST00000443981 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
PTPRN-207ENST00000443981 KCNQ2O43526 872 aa16.29■□□□□ 0.2
PTPRN-207ENST00000443981 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
PTPRN-207ENST00000443981 BTAF1O14981 1849 aa16.29■□□□□ 0.2
PTPRN-207ENST00000443981 MEGF6O75095 1541 aa16.28■□□□□ 0.2
PTPRN-207ENST00000443981 SHANK3Q9BYB0 1731 aa16.28■□□□□ 0.2
PTPRN-207ENST00000443981 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
PTPRN-207ENST00000443981 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
PTPRN-207ENST00000443981 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
PTPRN-207ENST00000443981 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
PTPRN-207ENST00000443981 EYA1Q99502 592 aa16.25■□□□□ 0.19
PTPRN-207ENST00000443981 LRP5O75197 1615 aa16.25■□□□□ 0.19
PTPRN-207ENST00000443981 DOT1LQ8TEK3 1739 aa16.25■□□□□ 0.19
PTPRN-207ENST00000443981 PROM2Q8N271 834 aa16.24■□□□□ 0.19
PTPRN-207ENST00000443981 SPG7Q9UQ90 795 aa16.24■□□□□ 0.19
PTPRN-207ENST00000443981 SRCAPQ6ZRS2 3230 aa16.23■□□□□ 0.19
PTPRN-207ENST00000443981 NCAPD2Q15021 1401 aa16.23■□□□□ 0.19
PTPRN-207ENST00000443981 PRIM1P49642 420 aaKnown RBP16.23■□□□□ 0.19
PTPRN-207ENST00000443981 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
PTPRN-207ENST00000443981 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
PTPRN-207ENST00000443981 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
PTPRN-207ENST00000443981 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
PTPRN-207ENST00000443981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPRN-207ENST00000443981 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
PTPRN-207ENST00000443981 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
PTPRN-207ENST00000443981 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
PTPRN-207ENST00000443981 SLC15A2Q16348 729 aa16.19■□□□□ 0.18
PTPRN-207ENST00000443981 SLC27A3Q5K4L6 730 aa16.19■□□□□ 0.18
PTPRN-207ENST00000443981 ITGB4P16144 1822 aa16.19■□□□□ 0.18
PTPRN-207ENST00000443981 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
PTPRN-207ENST00000443981 CYP27B1O15528 508 aa16.18■□□□□ 0.18
PTPRN-207ENST00000443981 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
PTPRN-207ENST00000443981 LY75O60449 1722 aa16.17■□□□□ 0.18
PTPRN-207ENST00000443981 NPC1L1Q9UHC9 1359 aa16.17■□□□□ 0.18
PTPRN-207ENST00000443981 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
PTPRN-207ENST00000443981 SPON1Q9HCB6 807 aa16.17■□□□□ 0.18
PTPRN-207ENST00000443981 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
PTPRN-207ENST00000443981 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
PTPRN-207ENST00000443981 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
PTPRN-207ENST00000443981 MTHFSP49914 203 aa16.15■□□□□ 0.18
PTPRN-207ENST00000443981 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
PTPRN-207ENST00000443981 MPRIPQ6WCQ1 1025 aa16.15■□□□□ 0.18
PTPRN-207ENST00000443981 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
PTPRN-207ENST00000443981 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
PTPRN-207ENST00000443981 HSP90AB1P08238 724 aaKnown RBP16.13■□□□□ 0.17
PTPRN-207ENST00000443981 PHKG2P15735 406 aa16.13■□□□□ 0.17
PTPRN-207ENST00000443981 IL13P35225 146 aa16.13■□□□□ 0.17
PTPRN-207ENST00000443981 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
PTPRN-207ENST00000443981 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
PTPRN-207ENST00000443981 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
PTPRN-207ENST00000443981 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
PTPRN-207ENST00000443981 QSER1Q2KHR3 1735 aa16.12■□□□□ 0.17
PTPRN-207ENST00000443981 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
PTPRN-207ENST00000443981 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
PTPRN-207ENST00000443981 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
PTPRN-207ENST00000443981 CNGB1Q14028 1251 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-207ENST00000443981 TMOD3Q9NYL9 352 aa16.11■□□□□ 0.17
PTPRN-207ENST00000443981 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
PTPRN-207ENST00000443981 ZNF530Q6P9A1 599 aaPredicted RBP16.09■□□□□ 0.17
PTPRN-207ENST00000443981 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
PTPRN-207ENST00000443981 DCAF5Q96JK2 942 aa16.09■□□□□ 0.17
PTPRN-207ENST00000443981 TFCP2L1Q9NZI6 479 aa16.09■□□□□ 0.17
PTPRN-207ENST00000443981 TAF1LQ8IZX4 1826 aa16.09■□□□□ 0.17
PTPRN-207ENST00000443981 KDRP35968 1356 aa16.09■□□□□ 0.17
PTPRN-207ENST00000443981 ERVV-2B6SEH9 535 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 PIGBQ92521 554 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 MTFR1LQ9H019 292 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
PTPRN-207ENST00000443981 KCNQ4P56696 695 aa16.07■□□□□ 0.16
PTPRN-207ENST00000443981 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
PTPRN-207ENST00000443981 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
PTPRN-207ENST00000443981 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
PTPRN-207ENST00000443981 C5P01031 1676 aa16.07■□□□□ 0.16
PTPRN-207ENST00000443981 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
PTPRN-207ENST00000443981 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
PTPRN-207ENST00000443981 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
PTPRN-207ENST00000443981 HMOX1P09601 288 aa16.04■□□□□ 0.16
PTPRN-207ENST00000443981 CABP4P57796 275 aa16.04■□□□□ 0.16
PTPRN-207ENST00000443981 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
PTPRN-207ENST00000443981 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
PTPRN-207ENST00000443981 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
PTPRN-207ENST00000443981 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
PTPRN-207ENST00000443981 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
PTPRN-207ENST00000443981 SIK1P57059 783 aa16.03■□□□□ 0.16
PTPRN-207ENST00000443981 AKAP4Q5JQC9 854 aa16.03■□□□□ 0.16
PTPRN-207ENST00000443981 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
PTPRN-207ENST00000443981 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
PTPRN-207ENST00000443981 ASAP1Q9ULH1 1129 aa16.02■□□□□ 0.16
PTPRN-207ENST00000443981 MSH5O43196 834 aa16.01■□□□□ 0.15
PTPRN-207ENST00000443981 POLD1P28340 1107 aa16.01■□□□□ 0.15
PTPRN-207ENST00000443981 AK7Q96M32 723 aa16.01■□□□□ 0.15
PTPRN-207ENST00000443981 C4BP0C0L5 1744 aa16.01■□□□□ 0.15
PTPRN-207ENST00000443981 PPP2R1AP30153 589 aa16■□□□□ 0.15
PTPRN-207ENST00000443981 ATP6V1AP38606 617 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms