RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CAMTA1Q9Y6Y1 1673 aa12.33□□□□□ -0.44
SMPD4P1-203ENST00000443839 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
SMPD4P1-203ENST00000443839 RRP1P56182 461 aaKnown RBP12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 GNAI1P63096 354 aa12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 MCM10Q7L590 875 aa12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 COL22A1Q8NFW1 1626 aaPredicted RBP12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 IFT57Q9NWB7 429 aa12.32□□□□□ -0.44
SMPD4P1-203ENST00000443839 LMO7Q8WWI1 1683 aa12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 RAPGEF4Q8WZA2 1011 aa12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 MAP3K5Q99683 1374 aa12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 MAPK8IP2Q13387 824 aaPredicted RBP12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
SMPD4P1-203ENST00000443839 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
SMPD4P1-203ENST00000443839 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
SMPD4P1-203ENST00000443839 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
SMPD4P1-203ENST00000443839 TOM1L2Q6ZVM7 507 aa12.3□□□□□ -0.44
SMPD4P1-203ENST00000443839 EVA1CP58658 441 aa12.29□□□□□ -0.44
SMPD4P1-203ENST00000443839 EXOSC9Q06265 439 aaKnown RBP12.29□□□□□ -0.44
SMPD4P1-203ENST00000443839 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
SMPD4P1-203ENST00000443839 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
SMPD4P1-203ENST00000443839 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
SMPD4P1-203ENST00000443839 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 C1orf141Q5JVX7 400 aa12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
SMPD4P1-203ENST00000443839 PLIN1O60240 522 aa12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 CRB1P82279 1406 aa12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 MEGF6O75095 1541 aa12.27□□□□□ -0.45
SMPD4P1-203ENST00000443839 NUTM2BA6NNL0 878 aaPredicted RBP12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 NUTM2EB1AL46 878 aaPredicted RBP12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 BCAR3O75815 825 aa12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 ERICH6BQ5W0A0 696 aa12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 NUTM2AQ8IVF1 878 aaPredicted RBP12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 MSH5O43196 834 aa12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 SPG7Q9UQ90 795 aa12.26□□□□□ -0.45
SMPD4P1-203ENST00000443839 CHL1O00533 1208 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 CANXP27824 592 aaKnown RBP12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 IL17REQ8NFR9 667 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 CARD10Q9BWT7 1032 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 TSPYL4Q9UJ04 414 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
SMPD4P1-203ENST00000443839 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
SMPD4P1-203ENST00000443839 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
SMPD4P1-203ENST00000443839 JCADQ9P266 1359 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 LGR6Q9HBX8 967 aa12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
SMPD4P1-203ENST00000443839 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 IL2RBP14784 551 aa12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 TEFQ10587 303 aa12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
SMPD4P1-203ENST00000443839 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.45
SMPD4P1-203ENST00000443839 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
SMPD4P1-203ENST00000443839 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
SMPD4P1-203ENST00000443839 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.45
SMPD4P1-203ENST00000443839 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.45
SMPD4P1-203ENST00000443839 VAMP4O75379 141 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 PHKG2P15735 406 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 PPP4R2Q9NY27 417 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 VIRMAQ69YN4 1812 aaKnown RBP12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
SMPD4P1-203ENST00000443839 PCDH11XQ9BZA7 1347 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 PCDH11YQ9BZA8 1340 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 KRT24Q2M2I5 525 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 EXOC6Q8TAG9 804 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 CYP27B1O15528 508 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 HSPA1LP34931 641 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 CRBNQ96SW2 442 aa12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
SMPD4P1-203ENST00000443839 KIF16BQ96L93 1317 aa12.18□□□□□ -0.46
SMPD4P1-203ENST00000443839 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
SMPD4P1-203ENST00000443839 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms