RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 MCTP1Q6DN14 999 aa18.99■□□□□ 0.63
AP1S3-206ENST00000443700 COG3Q96JB2 828 aa18.99■□□□□ 0.63
AP1S3-206ENST00000443700 RGS12O14924 1447 aa18.99■□□□□ 0.63
AP1S3-206ENST00000443700 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
AP1S3-206ENST00000443700 SPATA31D1Q6ZQQ2 1576 aa18.99■□□□□ 0.63
AP1S3-206ENST00000443700 A2ML1A8K2U0 1454 aa18.98■□□□□ 0.63
AP1S3-206ENST00000443700 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.97■□□□□ 0.63
AP1S3-206ENST00000443700 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
AP1S3-206ENST00000443700 CEP85Q6P2H3 762 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 LMBRD1Q9NUN5 540 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 RTL1A6NKG5 1358 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 MSH6P52701 1360 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 HMMRO75330 724 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 ZSCAN23Q3MJ62 389 aa18.96■□□□□ 0.63
AP1S3-206ENST00000443700 NRXN3Q9Y4C0 1643 aa18.95■□□□□ 0.62
AP1S3-206ENST00000443700 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
AP1S3-206ENST00000443700 TERF1P54274 439 aa18.95■□□□□ 0.62
AP1S3-206ENST00000443700 NME9Q86XW9 330 aa18.95■□□□□ 0.62
AP1S3-206ENST00000443700 CPS1P31327 1500 aa18.95■□□□□ 0.62
AP1S3-206ENST00000443700 SDSP20132 328 aa18.94■□□□□ 0.62
AP1S3-206ENST00000443700 FBLN1P23142 703 aa18.94■□□□□ 0.62
AP1S3-206ENST00000443700 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
AP1S3-206ENST00000443700 AGLP35573 1532 aa18.94■□□□□ 0.62
AP1S3-206ENST00000443700 ERC2O15083 957 aa18.93■□□□□ 0.62
AP1S3-206ENST00000443700 NCLP19338 710 aaKnown RBP18.93■□□□□ 0.62
AP1S3-206ENST00000443700 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
AP1S3-206ENST00000443700 OFD1O75665 1012 aa18.93■□□□□ 0.62
AP1S3-206ENST00000443700 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
AP1S3-206ENST00000443700 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
AP1S3-206ENST00000443700 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
AP1S3-206ENST00000443700 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
AP1S3-206ENST00000443700 MCM2P49736 904 aa18.92■□□□□ 0.62
AP1S3-206ENST00000443700 FAM83GA6ND36 823 aa18.91■□□□□ 0.62
AP1S3-206ENST00000443700 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
AP1S3-206ENST00000443700 OSBPL3Q9H4L5 887 aa18.91■□□□□ 0.62
AP1S3-206ENST00000443700 TECPR2O15040 1411 aa18.9■□□□□ 0.62
AP1S3-206ENST00000443700 CHL1O00533 1208 aa18.9■□□□□ 0.62
AP1S3-206ENST00000443700 MBD3O95983 291 aa18.9■□□□□ 0.62
AP1S3-206ENST00000443700 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-206ENST00000443700 C16orf71Q8IYS4 520 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-206ENST00000443700 PDLIM2Q96JY6 352 aa18.9■□□□□ 0.62
AP1S3-206ENST00000443700 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
AP1S3-206ENST00000443700 FMN2Q9NZ56 1722 aa18.89■□□□□ 0.61
AP1S3-206ENST00000443700 N4BP2Q86UW6 1770 aaPredicted RBP18.88■□□□□ 0.61
AP1S3-206ENST00000443700 MCCP23508 829 aa18.88■□□□□ 0.61
AP1S3-206ENST00000443700 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
AP1S3-206ENST00000443700 DCTN1Q14203 1278 aa18.88■□□□□ 0.61
AP1S3-206ENST00000443700 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
AP1S3-206ENST00000443700 LRSAM1Q6UWE0 723 aa18.88■□□□□ 0.61
AP1S3-206ENST00000443700 SIRT1Q96EB6 747 aa18.88■□□□□ 0.61
AP1S3-206ENST00000443700 NOL7Q9UMY1 257 aaKnown RBP18.88■□□□□ 0.61
AP1S3-206ENST00000443700 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
AP1S3-206ENST00000443700 MCM5P33992 734 aa18.87■□□□□ 0.61
AP1S3-206ENST00000443700 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.87■□□□□ 0.61
AP1S3-206ENST00000443700 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
AP1S3-206ENST00000443700 ARHGEF10O15013 1369 aa18.87■□□□□ 0.61
AP1S3-206ENST00000443700 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
AP1S3-206ENST00000443700 ZNF500O60304 480 aaPredicted RBP18.86■□□□□ 0.61
AP1S3-206ENST00000443700 PRPF40AO75400 957 aaKnown RBP18.86■□□□□ 0.61
AP1S3-206ENST00000443700 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
AP1S3-206ENST00000443700 MEIS3Q99687 375 aa18.86■□□□□ 0.61
AP1S3-206ENST00000443700 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
AP1S3-206ENST00000443700 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
AP1S3-206ENST00000443700 RBSNQ9H1K0 784 aa18.86■□□□□ 0.61
AP1S3-206ENST00000443700 PDCL3Q9H2J4 239 aa18.86■□□□□ 0.61
AP1S3-206ENST00000443700 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
AP1S3-206ENST00000443700 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
AP1S3-206ENST00000443700 PKP1Q13835 747 aa18.85■□□□□ 0.61
AP1S3-206ENST00000443700 GPT2Q8TD30 523 aa18.85■□□□□ 0.61
AP1S3-206ENST00000443700 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
AP1S3-206ENST00000443700 ANAPC15P60006 121 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
AP1S3-206ENST00000443700 CSPP1Q1MSJ5 1256 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 SYAP1Q96A49 352 aaPredicted RBP18.84■□□□□ 0.61
AP1S3-206ENST00000443700 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 CRB1P82279 1406 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 TTC21BQ7Z4L5 1316 aa18.84■□□□□ 0.61
AP1S3-206ENST00000443700 PRIM1P49642 420 aaKnown RBP18.83■□□□□ 0.61
AP1S3-206ENST00000443700 PDE1AP54750 535 aa18.83■□□□□ 0.61
AP1S3-206ENST00000443700 SULT6B1Q6IMI4 303 aa18.83■□□□□ 0.61
AP1S3-206ENST00000443700 CCDC39Q9UFE4 941 aa18.83■□□□□ 0.61
AP1S3-206ENST00000443700 ZDHHC9Q9Y397 364 aa18.83■□□□□ 0.61
AP1S3-206ENST00000443700 PEAK1Q9H792 1746 aa18.83■□□□□ 0.61
AP1S3-206ENST00000443700 APBB1O00213 710 aa18.82■□□□□ 0.6
AP1S3-206ENST00000443700 INTS4Q96HW7 963 aaKnown RBP18.82■□□□□ 0.6
AP1S3-206ENST00000443700 CUL4AQ13619 759 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 ZKSCAN5Q9Y2L8 839 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
AP1S3-206ENST00000443700 BRD1O95696 1058 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 AEBP1Q8IUX7 1158 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 XRN1Q8IZH2 1706 aaKnown RBP18.81■□□□□ 0.6
AP1S3-206ENST00000443700 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 ESYT1Q9BSJ8 1104 aa18.81■□□□□ 0.6
AP1S3-206ENST00000443700 METP08581 1390 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 CACNA1FO60840 1977 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 PHF14O94880 888 aa18.8■□□□□ 0.6
AP1S3-206ENST00000443700 GNAI2P04899 355 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms