RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 ZBTB22O15209 634 aa14.05□□□□□ -0.16
HLA-DQB1-206ENST00000443574 BAG6P46379 1132 aa14.05□□□□□ -0.16
HLA-DQB1-206ENST00000443574 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
HLA-DQB1-206ENST00000443574 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
HLA-DQB1-206ENST00000443574 MEGF6O75095 1541 aa14.05□□□□□ -0.16
HLA-DQB1-206ENST00000443574 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-206ENST00000443574 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-206ENST00000443574 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
HLA-DQB1-206ENST00000443574 BCL9O00512 1426 aa14.04□□□□□ -0.16
HLA-DQB1-206ENST00000443574 RREB1Q92766 1687 aa14.04□□□□□ -0.16
HLA-DQB1-206ENST00000443574 PLEKHG2Q9H7P9 1386 aa14.03□□□□□ -0.16
HLA-DQB1-206ENST00000443574 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
HLA-DQB1-206ENST00000443574 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.17
HLA-DQB1-206ENST00000443574 TATP17735 454 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB1-206ENST00000443574 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
HLA-DQB1-206ENST00000443574 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
HLA-DQB1-206ENST00000443574 BTAF1O14981 1849 aa14.01□□□□□ -0.17
HLA-DQB1-206ENST00000443574 TRIM37O94972 964 aa14□□□□□ -0.17
HLA-DQB1-206ENST00000443574 USHBP1Q8N6Y0 703 aa14□□□□□ -0.17
HLA-DQB1-206ENST00000443574 MARCH10Q8NA82 808 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-206ENST00000443574 NUP188Q5SRE5 1749 aa14□□□□□ -0.17
HLA-DQB1-206ENST00000443574 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
HLA-DQB1-206ENST00000443574 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
HLA-DQB1-206ENST00000443574 EIF4A2Q14240 407 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-206ENST00000443574 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-206ENST00000443574 CNGB1Q14028 1251 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-206ENST00000443574 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
HLA-DQB1-206ENST00000443574 ITGB4P16144 1822 aa13.97□□□□□ -0.17
HLA-DQB1-206ENST00000443574 VIRMAQ69YN4 1812 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-206ENST00000443574 IGSF1Q8N6C5 1336 aa13.97□□□□□ -0.17
HLA-DQB1-206ENST00000443574 APBA3O96018 575 aa13.97□□□□□ -0.17
HLA-DQB1-206ENST00000443574 MTHFSP49914 203 aa13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 DEFB132Q7Z7B7 95 aa13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 EYA1Q99502 592 aa13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 BCL11BQ9C0K0 894 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
HLA-DQB1-206ENST00000443574 TOGARAM1Q9Y4F4 1720 aa13.95□□□□□ -0.18
HLA-DQB1-206ENST00000443574 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-206ENST00000443574 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-206ENST00000443574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DQB1-206ENST00000443574 KDRP35968 1356 aa13.94□□□□□ -0.18
HLA-DQB1-206ENST00000443574 LY75O60449 1722 aa13.93□□□□□ -0.18
HLA-DQB1-206ENST00000443574 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-206ENST00000443574 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-206ENST00000443574 ACSBG1Q96GR2 724 aa13.91□□□□□ -0.18
HLA-DQB1-206ENST00000443574 SCN11AQ9UI33 1791 aa13.91□□□□□ -0.18
HLA-DQB1-206ENST00000443574 PLSCR1O15162 318 aa13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 IL13P35225 146 aa13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 AMOTQ4VCS5 1084 aa13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 SYTL4Q96C24 671 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-206ENST00000443574 PPP2R1AP30153 589 aa13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 PLEKHO1Q53GL0 409 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 SULT6B1Q6IMI4 303 aa13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 IFNL2Q8IZJ0 200 aa13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 CAMKK2Q96RR4 588 aa13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
HLA-DQB1-206ENST00000443574 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
HLA-DQB1-206ENST00000443574 RALBP1Q15311 655 aa13.88□□□□□ -0.19
HLA-DQB1-206ENST00000443574 C5P01031 1676 aa13.88□□□□□ -0.19
HLA-DQB1-206ENST00000443574 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 CYP27B1O15528 508 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 KCNQ2O43526 872 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 AEBP1Q8IUX7 1158 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 QSER1Q2KHR3 1735 aa13.87□□□□□ -0.19
HLA-DQB1-206ENST00000443574 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
HLA-DQB1-206ENST00000443574 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
HLA-DQB1-206ENST00000443574 PHKG2P15735 406 aa13.86□□□□□ -0.19
HLA-DQB1-206ENST00000443574 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQB1-206ENST00000443574 HMOX1P09601 288 aa13.85□□□□□ -0.19
HLA-DQB1-206ENST00000443574 HMGB2P26583 209 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-206ENST00000443574 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-206ENST00000443574 LRP5O75197 1615 aa13.84□□□□□ -0.19
HLA-DQB1-206ENST00000443574 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-206ENST00000443574 NKX1-1Q15270 411 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQB1-206ENST00000443574 TXNRD1Q16881 649 aa13.84□□□□□ -0.19
HLA-DQB1-206ENST00000443574 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
HLA-DQB1-206ENST00000443574 PTF1AQ7RTS3 328 aa13.83□□□□□ -0.2
HLA-DQB1-206ENST00000443574 DCAF5Q96JK2 942 aa13.83□□□□□ -0.2
HLA-DQB1-206ENST00000443574 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
HLA-DQB1-206ENST00000443574 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
HLA-DQB1-206ENST00000443574 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
HLA-DQB1-206ENST00000443574 NEFMP07197 916 aa13.82□□□□□ -0.2
HLA-DQB1-206ENST00000443574 SLC27A3Q5K4L6 730 aa13.82□□□□□ -0.2
HLA-DQB1-206ENST00000443574 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
HLA-DQB1-206ENST00000443574 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQB1-206ENST00000443574 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQB1-206ENST00000443574 TUBGCP6Q96RT7 1819 aa13.81□□□□□ -0.2
HLA-DQB1-206ENST00000443574 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
HLA-DQB1-206ENST00000443574 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
HLA-DQB1-206ENST00000443574 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
HLA-DQB1-206ENST00000443574 MRC1P22897 1456 aa13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 ERVV-2B6SEH9 535 aa13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQB1-206ENST00000443574 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms