RNA–Protein interactions for RNA: ENST00000442825.6

CLNK-202, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLNK, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-202ENST00000442825 USP21Q9UK80 565 aa12.59□□□□□ -0.39
CLNK-202ENST00000442825 KDRP35968 1356 aa12.59□□□□□ -0.39
CLNK-202ENST00000442825 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLNK-202ENST00000442825 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
CLNK-202ENST00000442825 CARD10Q9BWT7 1032 aa12.58□□□□□ -0.4
CLNK-202ENST00000442825 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.4
CLNK-202ENST00000442825 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 RGS17Q9UGC6 210 aaPredicted RBP12.57□□□□□ -0.4
CLNK-202ENST00000442825 CRB1P82279 1406 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 FCHSD2O94868 740 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
CLNK-202ENST00000442825 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
CLNK-202ENST00000442825 POLA2Q14181 598 aa12.56□□□□□ -0.4
CLNK-202ENST00000442825 VPS72Q15906 364 aa12.56□□□□□ -0.4
CLNK-202ENST00000442825 NWD2Q9ULI1 1742 aa12.56□□□□□ -0.4
CLNK-202ENST00000442825 MEGF6O75095 1541 aa12.55□□□□□ -0.4
CLNK-202ENST00000442825 ATRNO75882 1429 aa12.54□□□□□ -0.4
CLNK-202ENST00000442825 APAF1O14727 1248 aa12.53□□□□□ -0.4
CLNK-202ENST00000442825 QTRT2Q9H974 415 aaKnown RBP12.53□□□□□ -0.4
CLNK-202ENST00000442825 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
CLNK-202ENST00000442825 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
CLNK-202ENST00000442825 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.4
CLNK-202ENST00000442825 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.4
CLNK-202ENST00000442825 RUNDC1Q96C34 613 aa12.52□□□□□ -0.4
CLNK-202ENST00000442825 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.4
CLNK-202ENST00000442825 GLI3P10071 1580 aa12.52□□□□□ -0.41
CLNK-202ENST00000442825 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
CLNK-202ENST00000442825 GJD4Q96KN9 370 aaPredicted RBP12.52□□□□□ -0.41
CLNK-202ENST00000442825 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
CLNK-202ENST00000442825 IL2RBP14784 551 aa12.51□□□□□ -0.41
CLNK-202ENST00000442825 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
CLNK-202ENST00000442825 TRPC5Q9UL62 973 aaPredicted RBP12.51□□□□□ -0.41
CLNK-202ENST00000442825 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
CLNK-202ENST00000442825 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
CLNK-202ENST00000442825 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
CLNK-202ENST00000442825 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
CLNK-202ENST00000442825 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
CLNK-202ENST00000442825 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
CLNK-202ENST00000442825 CYP27B1O15528 508 aa12.48□□□□□ -0.41
CLNK-202ENST00000442825 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
CLNK-202ENST00000442825 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
CLNK-202ENST00000442825 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
CLNK-202ENST00000442825 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
CLNK-202ENST00000442825 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
CLNK-202ENST00000442825 ONECUT3O60422 494 aaPredicted RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
CLNK-202ENST00000442825 HNRNPUQ00839 825 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLNK-202ENST00000442825 EVX2Q03828 476 aa12.47□□□□□ -0.41
CLNK-202ENST00000442825 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 ZNF530Q6P9A1 599 aaPredicted RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 ZCRB1Q8TBF4 217 aaKnown RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
CLNK-202ENST00000442825 RIPK4P57078 832 aa12.46□□□□□ -0.42
CLNK-202ENST00000442825 DCTN1Q14203 1278 aa12.46□□□□□ -0.42
CLNK-202ENST00000442825 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.42
CLNK-202ENST00000442825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.42
CLNK-202ENST00000442825 PHKG2P15735 406 aa12.45□□□□□ -0.42
CLNK-202ENST00000442825 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
CLNK-202ENST00000442825 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
CLNK-202ENST00000442825 IL17REQ8NFR9 667 aa12.45□□□□□ -0.42
CLNK-202ENST00000442825 LGR6Q9HBX8 967 aa12.45□□□□□ -0.42
CLNK-202ENST00000442825 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 EXOC5O00471 708 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
CLNK-202ENST00000442825 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
CLNK-202ENST00000442825 SPG7Q9UQ90 795 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 ZNF521Q96K83 1311 aa12.44□□□□□ -0.42
CLNK-202ENST00000442825 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
CLNK-202ENST00000442825 DDB1Q16531 1140 aa12.43□□□□□ -0.42
CLNK-202ENST00000442825 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
CLNK-202ENST00000442825 MCM10Q7L590 875 aa12.43□□□□□ -0.42
CLNK-202ENST00000442825 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
CLNK-202ENST00000442825 CDCA7Q9BWT1 371 aaPredicted RBP12.43□□□□□ -0.42
CLNK-202ENST00000442825 PARP4Q9UKK3 1724 aaKnown RBP12.43□□□□□ -0.42
CLNK-202ENST00000442825 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
CLNK-202ENST00000442825 TNS2Q63HR2 1409 aa12.43□□□□□ -0.42
CLNK-202ENST00000442825 LRRC37A3O60309 1634 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 FAM182BQ5T319 152 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 PLEKHG2Q9H7P9 1386 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 NEFMP07197 916 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 RXRBP28702 533 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
CLNK-202ENST00000442825 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
CLNK-202ENST00000442825 A0A0G2JS52 829 aa12.41□□□□□ -0.42
CLNK-202ENST00000442825 MYT1Q01538 1121 aa12.41□□□□□ -0.42
CLNK-202ENST00000442825 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
CLNK-202ENST00000442825 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms