RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
HDLBP-219ENST00000442714 USP47Q96K76 1375 aa14.17□□□□□ -0.14
HDLBP-219ENST00000442714 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
HDLBP-219ENST00000442714 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
HDLBP-219ENST00000442714 CASZ1Q86V15 1759 aa14.15□□□□□ -0.14
HDLBP-219ENST00000442714 RTL1A6NKG5 1358 aa14.15□□□□□ -0.14
HDLBP-219ENST00000442714 NSD2O96028 1365 aa14.15□□□□□ -0.14
HDLBP-219ENST00000442714 INSRP06213 1382 aa14.15□□□□□ -0.14
HDLBP-219ENST00000442714 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
HDLBP-219ENST00000442714 CCNL1Q9UK58 526 aaPredicted RBP14.14□□□□□ -0.15
HDLBP-219ENST00000442714 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
HDLBP-219ENST00000442714 MAP3K5Q99683 1374 aa14.13□□□□□ -0.15
HDLBP-219ENST00000442714 CYP27B1O15528 508 aa14.13□□□□□ -0.15
HDLBP-219ENST00000442714 KIF24Q5T7B8 1368 aa14.12□□□□□ -0.15
HDLBP-219ENST00000442714 MEGF6O75095 1541 aa14.12□□□□□ -0.15
HDLBP-219ENST00000442714 POLD1P28340 1107 aa14.12□□□□□ -0.15
HDLBP-219ENST00000442714 COL23A1Q86Y22 540 aaPredicted RBP14.12□□□□□ -0.15
HDLBP-219ENST00000442714 ZNF784Q8NCA9 323 aaPredicted RBP14.12□□□□□ -0.15
HDLBP-219ENST00000442714 EMILIN1Q9Y6C2 1016 aa14.12□□□□□ -0.15
HDLBP-219ENST00000442714 NHSQ6T4R5 1651 aa14.11□□□□□ -0.15
HDLBP-219ENST00000442714 NKX1-1Q15270 411 aaPredicted RBP14.11□□□□□ -0.15
HDLBP-219ENST00000442714 WASHC2AQ641Q2 1341 aa14.11□□□□□ -0.15
HDLBP-219ENST00000442714 LTN1O94822 1766 aa14.1□□□□□ -0.15
HDLBP-219ENST00000442714 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
HDLBP-219ENST00000442714 FLT4P35916 1363 aa14.09□□□□□ -0.15
HDLBP-219ENST00000442714 HMGB2P26583 209 aaKnown RBP14.09□□□□□ -0.15
HDLBP-219ENST00000442714 GPR162Q16538 588 aa14.09□□□□□ -0.15
HDLBP-219ENST00000442714 PIGBQ92521 554 aa14.09□□□□□ -0.15
HDLBP-219ENST00000442714 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
HDLBP-219ENST00000442714 PAPPAQ13219 1627 aa14.08□□□□□ -0.15
HDLBP-219ENST00000442714 KAT6BQ8WYB5 2073 aa14.08□□□□□ -0.15
HDLBP-219ENST00000442714 PPM1GO15355 546 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-219ENST00000442714 EYA1Q99502 592 aa14.08□□□□□ -0.16
HDLBP-219ENST00000442714 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.08□□□□□ -0.162e-15■□□□□ 9.9
HDLBP-219ENST00000442714 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
HDLBP-219ENST00000442714 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
HDLBP-219ENST00000442714 SMG6Q86US8 1419 aaKnown RBP14.07□□□□□ -0.16
HDLBP-219ENST00000442714 SMARCC1Q92922 1105 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-219ENST00000442714 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
HDLBP-219ENST00000442714 CLSPNQ9HAW4 1339 aa14.07□□□□□ -0.16
HDLBP-219ENST00000442714 BTAF1O14981 1849 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 MSH5O43196 834 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 FLAD1Q8NFF5 587 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 NLGN2Q8NFZ4 835 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 SPG7Q9UQ90 795 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 NSD3Q9BZ95 1437 aa14.06□□□□□ -0.16
HDLBP-219ENST00000442714 MYOM1P52179 1685 aa14.05□□□□□ -0.16
HDLBP-219ENST00000442714 FAM208AQ9UK61 1670 aaKnown RBP14.04□□□□□ -0.16
HDLBP-219ENST00000442714 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
HDLBP-219ENST00000442714 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
HDLBP-219ENST00000442714 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
HDLBP-219ENST00000442714 EIF4A2Q14240 407 aaKnown RBP14.02□□□□□ -0.17
HDLBP-219ENST00000442714 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
HDLBP-219ENST00000442714 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.17
HDLBP-219ENST00000442714 PANK3Q9H999 370 aa14.02□□□□□ -0.17
HDLBP-219ENST00000442714 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
HDLBP-219ENST00000442714 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
HDLBP-219ENST00000442714 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 GOLGB1Q14789 3259 aaKnown RBP14.01□□□□□ -0.17
HDLBP-219ENST00000442714 LOC102724428A0A0B4J2F2 783 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 PHKG2P15735 406 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.175e-10■■■■□ 24.3
HDLBP-219ENST00000442714 TNNT2P45379 298 aaPredicted RBP14.01□□□□□ -0.17
HDLBP-219ENST00000442714 SIK1P57059 783 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
HDLBP-219ENST00000442714 SMIM5Q71RC9 77 aa14.01□□□□□ -0.17
HDLBP-219ENST00000442714 HSPA5P11021 654 aaKnown RBP14□□□□□ -0.17
HDLBP-219ENST00000442714 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
HDLBP-219ENST00000442714 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
HDLBP-219ENST00000442714 ATG3Q9NT62 314 aa14□□□□□ -0.17
HDLBP-219ENST00000442714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.99□□□□□ -0.17
HDLBP-219ENST00000442714 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
HDLBP-219ENST00000442714 AK7Q96M32 723 aa13.99□□□□□ -0.17
HDLBP-219ENST00000442714 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
HDLBP-219ENST00000442714 C1QTNF8P60827 252 aa13.98□□□□□ -0.17
HDLBP-219ENST00000442714 ITPK1Q13572 414 aa13.98□□□□□ -0.17
HDLBP-219ENST00000442714 RGPD2P0DJD1 1756 aa13.98□□□□□ -0.17
HDLBP-219ENST00000442714 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
HDLBP-219ENST00000442714 SSFA2P28290 1259 aa13.97□□□□□ -0.17
HDLBP-219ENST00000442714 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
HDLBP-219ENST00000442714 PLEKHO1Q53GL0 409 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-219ENST00000442714 SLC4A9Q96Q91 983 aa13.96□□□□□ -0.17
HDLBP-219ENST00000442714 SHANK3Q9BYB0 1731 aa13.95□□□□□ -0.18
HDLBP-219ENST00000442714 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
HDLBP-219ENST00000442714 PHF14O94880 888 aa13.95□□□□□ -0.18
HDLBP-219ENST00000442714 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
HDLBP-219ENST00000442714 LY75O60449 1722 aa13.95□□□□□ -0.18
HDLBP-219ENST00000442714 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
HDLBP-219ENST00000442714 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
HDLBP-219ENST00000442714 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
HDLBP-219ENST00000442714 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
HDLBP-219ENST00000442714 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
HDLBP-219ENST00000442714 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
HDLBP-219ENST00000442714 RC3H1Q5TC82 1133 aaKnown RBP13.93□□□□□ -0.18
HDLBP-219ENST00000442714 PLEKHG2Q9H7P9 1386 aa13.93□□□□□ -0.18
HDLBP-219ENST00000442714 GNPATO15228 680 aa13.92□□□□□ -0.18
HDLBP-219ENST00000442714 QSER1Q2KHR3 1735 aa13.92□□□□□ -0.18
HDLBP-219ENST00000442714 IL13P35225 146 aa13.91□□□□□ -0.18
HDLBP-219ENST00000442714 AEBP1Q8IUX7 1158 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms