RNA–Protein interactions for RNA: ENST00000442656.6

PRC1-204, Transcript of protein regulator of cytokinesis 1, human

TSL 2 BASIC

Gene PRC1, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRC1-204	ENST00000442656	VAMP4	O75379	141 aa		18.55	■□□□□ 0.56
PRC1-204	ENST00000442656	PANK1	Q8TE04	598 aa		18.55	■□□□□ 0.56
PRC1-204	ENST00000442656	HTATSF1	O43719	755 aa	Known RBP	18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	ERBB3	P21860	1342 aa		18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	CAMTA1	Q9Y6Y1	1673 aa		18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	GNAT3	A8MTJ3	354 aa		18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	C8orf58	Q8NAV2	365 aa		18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	NHSL1	Q5SYE7	1610 aa		18.54	■□□□□ 0.56
PRC1-204	ENST00000442656	LTBP4	Q8N2S1	1624 aa		18.53	■□□□□ 0.56
PRC1-204	ENST00000442656	ELL2	O00472	640 aa	Predicted RBP	18.53	■□□□□ 0.56
PRC1-204	ENST00000442656	RLBP1	P12271	317 aa		18.53	■□□□□ 0.56
PRC1-204	ENST00000442656	CHRNA2	Q15822	529 aa		18.53	■□□□□ 0.56
PRC1-204	ENST00000442656	ALDH1L2	Q3SY69	923 aa		18.53	■□□□□ 0.56
PRC1-204	ENST00000442656	KIAA0232	Q92628	1395 aa		18.52	■□□□□ 0.56
PRC1-204	ENST00000442656	MAP3K5	Q99683	1374 aa		18.52	■□□□□ 0.56
PRC1-204	ENST00000442656	COG6	Q9Y2V7	657 aa		18.52	■□□□□ 0.56
PRC1-204	ENST00000442656	CPD	O75976	1380 aa		18.52	■□□□□ 0.55
PRC1-204	ENST00000442656	TWISTNB	Q3B726	338 aa	Predicted RBP	18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	ZKSCAN2	Q63HK3	967 aa		18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	ZNF428	Q96B54	188 aa		18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	LRRC37A3	O60309	1634 aa		18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	LMO7	Q8WWI1	1683 aa		18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	IL17RE	Q8NFR9	667 aa		18.51	■□□□□ 0.55
PRC1-204	ENST00000442656	MIS18A	Q9NYP9	233 aa		18.5	■□□□□ 0.55
PRC1-204	ENST00000442656	NOB1	Q9ULX3	412 aa	Known RBP	18.5	■□□□□ 0.55
PRC1-204	ENST00000442656	CLUAP1	Q96AJ1	413 aa		18.5	■□□□□ 0.55
PRC1-204	ENST00000442656	ABCC6	O95255	1503 aa		18.49	■□□□□ 0.55
PRC1-204	ENST00000442656	KRT24	Q2M2I5	525 aa		18.49	■□□□□ 0.55
PRC1-204	ENST00000442656	TRIM27	P14373	513 aa		18.48	■□□□□ 0.55
PRC1-204	ENST00000442656	BRPF1	P55201	1214 aa	Predicted RBP	18.48	■□□□□ 0.55
PRC1-204	ENST00000442656	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.48	■□□□□ 0.55
PRC1-204	ENST00000442656	MRPL50	Q8N5N7	158 aa	Known RBP	18.48	■□□□□ 0.55
PRC1-204	ENST00000442656	NLRP2	Q9NX02	1062 aa		18.47	■□□□□ 0.55
PRC1-204	ENST00000442656	TSPYL4	Q9UJ04	414 aa		18.47	■□□□□ 0.55
PRC1-204	ENST00000442656	ABCA3	Q99758	1704 aa		18.47	■□□□□ 0.55
PRC1-204	ENST00000442656	KIF16B	Q96L93	1317 aa		18.47	■□□□□ 0.55
PRC1-204	ENST00000442656	ATF7IP	Q6VMQ6	1270 aa		18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	DZIP1L	Q8IYY4	767 aa	Known RBP	18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	TCERG1	O14776	1098 aa	Known RBP	18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	AMOT	Q4VCS5	1084 aa		18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	FAM208A	Q9UK61	1670 aa	Known RBP	18.46	■□□□□ 0.55
PRC1-204	ENST00000442656	TSHZ2	Q9NRE2	1034 aa		18.45	■□□□□ 0.54
PRC1-204	ENST00000442656	ROBO1	Q9Y6N7	1651 aa		18.45	■□□□□ 0.54
PRC1-204	ENST00000442656	CSB-PGBD3	P0DP91	1061 aa		18.45	■□□□□ 0.54
PRC1-204	ENST00000442656	AKAP4	Q5JQC9	854 aa		18.45	■□□□□ 0.54
PRC1-204	ENST00000442656	LGR6	Q9HBX8	967 aa		18.45	■□□□□ 0.54
PRC1-204	ENST00000442656	CEMIP	Q8WUJ3	1361 aa		18.44	■□□□□ 0.54
PRC1-204	ENST00000442656	MS4A1	P11836	297 aa		18.44	■□□□□ 0.54
PRC1-204	ENST00000442656	FTSJ3	Q8IY81	847 aa	Known RBP	18.44	■□□□□ 0.54
PRC1-204	ENST00000442656	PRDM11	Q9NQV5	511 aa		18.44	■□□□□ 0.54
PRC1-204	ENST00000442656	IPO8	O15397	1037 aa	Known RBP	18.43	■□□□□ 0.54
PRC1-204	ENST00000442656	HAP1	P54257	671 aa	Predicted RBP	18.43	■□□□□ 0.54
PRC1-204	ENST00000442656	MVP	Q14764	893 aa	Known RBP	18.43	■□□□□ 0.54
PRC1-204	ENST00000442656	TAF7	Q15545	349 aa	Predicted RBP	18.43	■□□□□ 0.54
PRC1-204	ENST00000442656	KDM2B	Q8NHM5	1336 aa		18.42	■□□□□ 0.54
PRC1-204	ENST00000442656	MPRIP	Q6WCQ1	1025 aa		18.41	■□□□□ 0.54
PRC1-204	ENST00000442656	RAPGEF4	Q8WZA2	1011 aa		18.41	■□□□□ 0.54
PRC1-204	ENST00000442656	BABAM1	Q9NWV8	329 aa		18.41	■□□□□ 0.54
PRC1-204	ENST00000442656	C1orf141	Q5JVX7	400 aa		18.4	■□□□□ 0.54
PRC1-204	ENST00000442656	MEGF6	O75095	1541 aa		18.4	■□□□□ 0.54
PRC1-204	ENST00000442656	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.4	■□□□□ 0.54
PRC1-204	ENST00000442656	TMEM57	Q8N5G2	664 aa		18.4	■□□□□ 0.54
PRC1-204	ENST00000442656	ARHGAP45	Q92619	1136 aa		18.4	■□□□□ 0.54
PRC1-204	ENST00000442656	TAT	P17735	454 aa	Predicted RBP	18.39	■□□□□ 0.53
PRC1-204	ENST00000442656	VIRMA	Q69YN4	1812 aa	Known RBP	18.39	■□□□□ 0.53
PRC1-204	ENST00000442656	RNMT	O43148	476 aa	Known RBP	18.38	■□□□□ 0.53
PRC1-204	ENST00000442656	AAMP	Q13685	434 aa		18.38	■□□□□ 0.53
PRC1-204	ENST00000442656	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.38	■□□□□ 0.53
PRC1-204	ENST00000442656	COL5A2	P05997	1499 aa	Predicted RBP	18.38	■□□□□ 0.53
PRC1-204	ENST00000442656	WDR17	Q8IZU2	1322 aa		18.38	■□□□□ 0.53
PRC1-204	ENST00000442656	ITPRIP	Q8IWB1	547 aa		18.37	■□□□□ 0.53
PRC1-204	ENST00000442656	IGHD	P01880	384 aa		18.36	■□□□□ 0.53
PRC1-204	ENST00000442656	PCDHB15	Q9Y5E8	787 aa		18.36	■□□□□ 0.53
PRC1-204	ENST00000442656	TEF	Q10587	303 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.35	■□□□□ 0.53	1e-6	■■■□□ 15
PRC1-204	ENST00000442656	DDX19B	Q9UMR2	479 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	OVOS2	A0A0G2JMS6	1433 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	ADAMTS7	Q9UKP4	1686 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	KDM3B	Q7LBC6	1761 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	TOM1L2	Q6ZVM7	507 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	SPG7	Q9UQ90	795 aa		18.35	■□□□□ 0.53
PRC1-204	ENST00000442656	ABCC4	O15439	1325 aa		18.34	■□□□□ 0.53
PRC1-204	ENST00000442656	PLEKHG2	Q9H7P9	1386 aa		18.34	■□□□□ 0.53
PRC1-204	ENST00000442656	KCNQ3	O43525	872 aa		18.33	■□□□□ 0.52
PRC1-204	ENST00000442656	PHKG2	P15735	406 aa		18.33	■□□□□ 0.52
PRC1-204	ENST00000442656	SKAP1	Q86WV1	359 aa		18.33	■□□□□ 0.52
PRC1-204	ENST00000442656	API5	Q9BZZ5	524 aa	Known RBP	18.33	■□□□□ 0.52
PRC1-204	ENST00000442656	PKD1L3	Q7Z443	1732 aa		18.33	■□□□□ 0.52
PRC1-204	ENST00000442656	BTBD11	A6QL63	1104 aa		18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	SLC4A2	P04920	1241 aa		18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	EIF4A1	P60842	406 aa	Known RBP	18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	STRN4	Q9NRL3	753 aa		18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	SIPA1L3	O60292	1781 aa	Predicted RBP	18.32	■□□□□ 0.52
PRC1-204	ENST00000442656	KDM6A	O15550	1401 aa	Predicted RBP	18.31	■□□□□ 0.52
PRC1-204	ENST00000442656	LARP1	Q6PKG0	1096 aa	Known RBP	18.31	■□□□□ 0.52
PRC1-204	ENST00000442656	ZBTB40	Q9NUA8	1239 aa		18.31	■□□□□ 0.52
PRC1-204	ENST00000442656	RGS12	O14924	1447 aa		18.31	■□□□□ 0.52
PRC1-204	ENST00000442656	SOS1	Q07889	1333 aa	Predicted RBP	18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms