RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 AMPHP49418 695 aa28.84■■■□□ 2.21
TMEM50B-204ENST00000442441 C1QTNF8P60827 252 aa28.83■■■□□ 2.21
TMEM50B-204ENST00000442441 ZCRB1Q8TBF4 217 aaKnown RBP28.83■■■□□ 2.21
TMEM50B-204ENST00000442441 NSD2O96028 1365 aa28.83■■■□□ 2.21
TMEM50B-204ENST00000442441 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
TMEM50B-204ENST00000442441 TUBGCP6Q96RT7 1819 aa28.83■■■□□ 2.21
TMEM50B-204ENST00000442441 GOLGB1Q14789 3259 aaKnown RBP28.82■■■□□ 2.2
TMEM50B-204ENST00000442441 FBLN1P23142 703 aa28.82■■■□□ 2.2
TMEM50B-204ENST00000442441 TESK2Q96S53 571 aa28.82■■■□□ 2.2
TMEM50B-204ENST00000442441 LY75O60449 1722 aa28.82■■■□□ 2.2
TMEM50B-204ENST00000442441 MEGF6O75095 1541 aa28.8■■■□□ 2.2
TMEM50B-204ENST00000442441 SENP3-EIF4A1A0A087X0R7 540 aa28.8■■■□□ 2.2
TMEM50B-204ENST00000442441 RGPD2P0DJD1 1756 aa28.8■■■□□ 2.2
TMEM50B-204ENST00000442441 SHANK3Q9BYB0 1731 aa28.8■■■□□ 2.2
TMEM50B-204ENST00000442441 PELP1Q8IZL8 1130 aaKnown RBP28.79■■■□□ 2.2
TMEM50B-204ENST00000442441 CCNL1Q9UK58 526 aaPredicted RBP28.79■■■□□ 2.2
TMEM50B-204ENST00000442441 ST20-MTHFSA0A0A6YYL1 179 aa28.78■■■□□ 2.2
TMEM50B-204ENST00000442441 NLGN2Q8NFZ4 835 aa28.77■■■□□ 2.2
TMEM50B-204ENST00000442441 RTL1A6NKG5 1358 aa28.76■■■□□ 2.2
TMEM50B-204ENST00000442441 SLC24A1O60721 1099 aa28.76■■■□□ 2.19
TMEM50B-204ENST00000442441 NBPF6Q5VWK0 638 aa28.75■■■□□ 2.19
TMEM50B-204ENST00000442441 NBPF4Q96M43 638 aa28.75■■■□□ 2.19
TMEM50B-204ENST00000442441 USP47Q96K76 1375 aa28.75■■■□□ 2.19
TMEM50B-204ENST00000442441 CGNL1Q0VF96 1302 aa28.73■■■□□ 2.19
TMEM50B-204ENST00000442441 MSH5O43196 834 aa28.72■■■□□ 2.19
TMEM50B-204ENST00000442441 RRS1Q15050 365 aaKnown RBP28.72■■■□□ 2.19
TMEM50B-204ENST00000442441 COL23A1Q86Y22 540 aaPredicted RBP28.72■■■□□ 2.19
TMEM50B-204ENST00000442441 USHBP1Q8N6Y0 703 aa28.71■■■□□ 2.19
TMEM50B-204ENST00000442441 RAPGEF4Q8WZA2 1011 aa28.71■■■□□ 2.19
TMEM50B-204ENST00000442441 GIGYF1O75420 1035 aaPredicted RBP28.7■■■□□ 2.18
TMEM50B-204ENST00000442441 FYB1O15117 783 aa28.69■■■□□ 2.18
TMEM50B-204ENST00000442441 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
TMEM50B-204ENST00000442441 GGNBP2Q9H3C7 697 aa28.68■■■□□ 2.18
TMEM50B-204ENST00000442441 GRIN3BO60391 1043 aa28.67■■■□□ 2.18
TMEM50B-204ENST00000442441 YBX3P16989 372 aaKnown RBP eCLIP28.67■■■□□ 2.18
TMEM50B-204ENST00000442441 TATP17735 454 aaPredicted RBP28.66■■■□□ 2.18
TMEM50B-204ENST00000442441 MSL1Q68DK7 614 aa28.64■■■□□ 2.18
TMEM50B-204ENST00000442441 PCDH11XQ9BZA7 1347 aa28.64■■■□□ 2.17
TMEM50B-204ENST00000442441 PCDH11YQ9BZA8 1340 aa28.64■■■□□ 2.17
TMEM50B-204ENST00000442441 HMGB2P26583 209 aaKnown RBP28.63■■■□□ 2.17
TMEM50B-204ENST00000442441 C5P01031 1676 aa28.63■■■□□ 2.17
TMEM50B-204ENST00000442441 INSRP06213 1382 aa28.62■■■□□ 2.17
TMEM50B-204ENST00000442441 HSP90AB2PQ58FF8 381 aa28.62■■■□□ 2.17
TMEM50B-204ENST00000442441 TMF1P82094 1093 aa28.61■■■□□ 2.17
TMEM50B-204ENST00000442441 FLAD1Q8NFF5 587 aa28.61■■■□□ 2.17
TMEM50B-204ENST00000442441 PALLDQ8WX93 1383 aa28.6■■■□□ 2.17
TMEM50B-204ENST00000442441 MPRIPQ6WCQ1 1025 aa28.59■■■□□ 2.17
TMEM50B-204ENST00000442441 CD2APQ9Y5K6 639 aa28.59■■■□□ 2.17
TMEM50B-204ENST00000442441 FLT4P35916 1363 aa28.59■■■□□ 2.17
TMEM50B-204ENST00000442441 KIF24Q5T7B8 1368 aa28.58■■■□□ 2.17
TMEM50B-204ENST00000442441 TAF1LQ8IZX4 1826 aa28.57■■■□□ 2.16
TMEM50B-204ENST00000442441 CYP27B1O15528 508 aa28.56■■■□□ 2.16
TMEM50B-204ENST00000442441 KIF20BQ96Q89 1820 aa28.55■■■□□ 2.16
TMEM50B-204ENST00000442441 CEP350Q5VT06 3117 aa28.54■■■□□ 2.16
TMEM50B-204ENST00000442441 SMARCC1Q92922 1105 aaPredicted RBP28.54■■■□□ 2.16
TMEM50B-204ENST00000442441 AK7Q96M32 723 aa28.52■■■□□ 2.16
TMEM50B-204ENST00000442441 C4BP0C0L5 1744 aa28.52■■■□□ 2.16
TMEM50B-204ENST00000442441 TOGARAM1Q9Y4F4 1720 aa28.52■■■□□ 2.16
TMEM50B-204ENST00000442441 CDCA8Q53HL2 280 aa28.51■■■□□ 2.15
TMEM50B-204ENST00000442441 ATP10DQ9P241 1426 aa28.51■■■□□ 2.15
TMEM50B-204ENST00000442441 ITGB4P16144 1822 aa28.5■■■□□ 2.15
TMEM50B-204ENST00000442441 EMILIN1Q9Y6C2 1016 aa28.49■■■□□ 2.15
TMEM50B-204ENST00000442441 PKD1L3Q7Z443 1732 aa28.49■■■□□ 2.15
TMEM50B-204ENST00000442441 AMIGO3Q86WK7 504 aa28.48■■■□□ 2.15
TMEM50B-204ENST00000442441 PIGBQ92521 554 aa28.48■■■□□ 2.15
TMEM50B-204ENST00000442441 NKX1-1Q15270 411 aaPredicted RBP28.47■■■□□ 2.15
TMEM50B-204ENST00000442441 CARD14Q9BXL6 1004 aa28.47■■■□□ 2.15
TMEM50B-204ENST00000442441 NCAPD2Q15021 1401 aa28.46■■■□□ 2.15
TMEM50B-204ENST00000442441 NSD3Q9BZ95 1437 aa28.45■■■□□ 2.15
TMEM50B-204ENST00000442441 UBR3Q6ZT12 1888 aa28.45■■■□□ 2.15
TMEM50B-204ENST00000442441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.45■■■□□ 2.14
TMEM50B-204ENST00000442441 PHF14O94880 888 aa28.45■■■□□ 2.14
TMEM50B-204ENST00000442441 SPG7Q9UQ90 795 aa28.45■■■□□ 2.14
TMEM50B-204ENST00000442441 GPBP1L1Q9HC44 474 aaPredicted RBP28.44■■■□□ 2.14
TMEM50B-204ENST00000442441 SMIM5Q71RC9 77 aa28.43■■■□□ 2.14
TMEM50B-204ENST00000442441 ADCY9O60503 1353 aa28.42■■■□□ 2.14
TMEM50B-204ENST00000442441 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
TMEM50B-204ENST00000442441 SSFA2P28290 1259 aa28.42■■■□□ 2.14
TMEM50B-204ENST00000442441 IGSF1Q8N6C5 1336 aa28.42■■■□□ 2.14
TMEM50B-204ENST00000442441 LOC102724428A0A0B4J2F2 783 aa28.41■■■□□ 2.14
TMEM50B-204ENST00000442441 SIK1P57059 783 aa28.41■■■□□ 2.14
TMEM50B-204ENST00000442441 MAP2P11137 1827 aaKnown RBP28.41■■■□□ 2.14
TMEM50B-204ENST00000442441 LINC00116Q8NCU8 138 aa28.4■■■□□ 2.14
TMEM50B-204ENST00000442441 WASHC2AQ641Q2 1341 aa28.4■■■□□ 2.14
TMEM50B-204ENST00000442441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.39■■■□□ 2.144e-6■□□□□ 10.8
TMEM50B-204ENST00000442441 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.14
TMEM50B-204ENST00000442441 EYA1Q99502 592 aa28.38■■■□□ 2.13
TMEM50B-204ENST00000442441 ANKRD26Q9UPS8 1709 aa28.38■■■□□ 2.13
TMEM50B-204ENST00000442441 WWC3Q9ULE0 1092 aa28.37■■■□□ 2.13
TMEM50B-204ENST00000442441 ZNF526Q8TF50 670 aaPredicted RBP28.36■■■□□ 2.13
TMEM50B-204ENST00000442441 ASAP1Q9ULH1 1129 aa28.36■■■□□ 2.13
TMEM50B-204ENST00000442441 GNPATO15228 680 aa28.34■■■□□ 2.13
TMEM50B-204ENST00000442441 ITPK1Q13572 414 aa28.34■■■□□ 2.13
TMEM50B-204ENST00000442441 IFFO2Q5TF58 517 aa28.34■■■□□ 2.13
TMEM50B-204ENST00000442441 IFNL2Q8IZJ0 200 aa28.34■■■□□ 2.13
TMEM50B-204ENST00000442441 PHKG2P15735 406 aa28.33■■■□□ 2.13
TMEM50B-204ENST00000442441 ATP6V1AP38606 617 aa28.33■■■□□ 2.13
TMEM50B-204ENST00000442441 ATG3Q9NT62 314 aa28.31■■■□□ 2.12
TMEM50B-204ENST00000442441 POLKQ9UBT6 870 aa28.31■■■□□ 2.12
TMEM50B-204ENST00000442441 HSPA6P17066 643 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms