RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CCNL1Q9UK58 526 aaPredicted RBP14.28□□□□□ -0.12
SYN3-204ENST00000441821 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
SYN3-204ENST00000441821 MSH5O43196 834 aa14.27□□□□□ -0.13
SYN3-204ENST00000441821 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.13
SYN3-204ENST00000441821 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
SYN3-204ENST00000441821 CD2APQ9Y5K6 639 aa14.27□□□□□ -0.13
SYN3-204ENST00000441821 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.13
SYN3-204ENST00000441821 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
SYN3-204ENST00000441821 HSPA6P17066 643 aa14.26□□□□□ -0.13
SYN3-204ENST00000441821 ZCRB1Q8TBF4 217 aaKnown RBP14.25□□□□□ -0.13
SYN3-204ENST00000441821 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
SYN3-204ENST00000441821 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
SYN3-204ENST00000441821 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
SYN3-204ENST00000441821 ADCY9O60503 1353 aa14.24□□□□□ -0.13
SYN3-204ENST00000441821 USP47Q96K76 1375 aa14.24□□□□□ -0.13
SYN3-204ENST00000441821 HMGB2P26583 209 aaKnown RBP14.24□□□□□ -0.13
SYN3-204ENST00000441821 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
SYN3-204ENST00000441821 TERF2IPQ9NYB0 399 aa14.23□□□□□ -0.13
SYN3-204ENST00000441821 FLAD1Q8NFF5 587 aa14.22□□□□□ -0.13
SYN3-204ENST00000441821 A0A1W2PP64 1363 aa14.22□□□□□ -0.13
SYN3-204ENST00000441821 HOXC9P31274 260 aa14.21□□□□□ -0.13
SYN3-204ENST00000441821 MEGF6O75095 1541 aa14.2□□□□□ -0.14
SYN3-204ENST00000441821 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
SYN3-204ENST00000441821 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
SYN3-204ENST00000441821 ZNF526Q8TF50 670 aaPredicted RBP14.2□□□□□ -0.14
SYN3-204ENST00000441821 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
SYN3-204ENST00000441821 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
SYN3-204ENST00000441821 C5P01031 1676 aa14.2□□□□□ -0.14
SYN3-204ENST00000441821 AMPHP49418 695 aa14.19□□□□□ -0.14
SYN3-204ENST00000441821 COG3Q96JB2 828 aa14.18□□□□□ -0.14
SYN3-204ENST00000441821 RGPD2P0DJD1 1756 aa14.18□□□□□ -0.14
SYN3-204ENST00000441821 NBPF6Q5VWK0 638 aa14.17□□□□□ -0.14
SYN3-204ENST00000441821 NBPF4Q96M43 638 aa14.17□□□□□ -0.14
SYN3-204ENST00000441821 CARD11Q9BXL7 1154 aa14.17□□□□□ -0.14
SYN3-204ENST00000441821 IGSF1Q8N6C5 1336 aa14.16□□□□□ -0.14
SYN3-204ENST00000441821 KIF3CO14782 793 aa14.16□□□□□ -0.14
SYN3-204ENST00000441821 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
SYN3-204ENST00000441821 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
SYN3-204ENST00000441821 TAF1LQ8IZX4 1826 aa14.15□□□□□ -0.14
SYN3-204ENST00000441821 RTL1A6NKG5 1358 aa14.15□□□□□ -0.14
SYN3-204ENST00000441821 FBLN1P23142 703 aa14.15□□□□□ -0.14
SYN3-204ENST00000441821 RAPGEF4Q8WZA2 1011 aa14.15□□□□□ -0.14
SYN3-204ENST00000441821 AK7Q96M32 723 aa14.14□□□□□ -0.15
SYN3-204ENST00000441821 C4BP0C0L5 1744 aa14.14□□□□□ -0.15
SYN3-204ENST00000441821 PCDH11XQ9BZA7 1347 aa14.14□□□□□ -0.15
SYN3-204ENST00000441821 PCDH11YQ9BZA8 1340 aa14.14□□□□□ -0.15
SYN3-204ENST00000441821 TATP17735 454 aaPredicted RBP14.13□□□□□ -0.15
SYN3-204ENST00000441821 APLP1P51693 650 aa14.13□□□□□ -0.15
SYN3-204ENST00000441821 MPRIPQ6WCQ1 1025 aa14.13□□□□□ -0.15
SYN3-204ENST00000441821 USHBP1Q8N6Y0 703 aa14.13□□□□□ -0.15
SYN3-204ENST00000441821 SMARCC1Q92922 1105 aaPredicted RBP14.13□□□□□ -0.15
SYN3-204ENST00000441821 NSD3Q9BZ95 1437 aa14.13□□□□□ -0.15
SYN3-204ENST00000441821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
SYN3-204ENST00000441821 AMIGO3Q86WK7 504 aa14.12□□□□□ -0.15
SYN3-204ENST00000441821 SMG6Q86US8 1419 aaKnown RBP14.12□□□□□ -0.15
SYN3-204ENST00000441821 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
SYN3-204ENST00000441821 SSFA2P28290 1259 aa14.11□□□□□ -0.15
SYN3-204ENST00000441821 RRS1Q15050 365 aaKnown RBP14.11□□□□□ -0.15
SYN3-204ENST00000441821 DNAJC5GQ8N7S2 189 aa14.11□□□□□ -0.15
SYN3-204ENST00000441821 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
SYN3-204ENST00000441821 CICQ96RK0 1608 aaPredicted RBP14.11□□□□□ -0.15
SYN3-204ENST00000441821 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
SYN3-204ENST00000441821 CYP27B1O15528 508 aa14.1□□□□□ -0.15
SYN3-204ENST00000441821 TOMM70O94826 608 aa14.1□□□□□ -0.15
SYN3-204ENST00000441821 PHF14O94880 888 aa14.1□□□□□ -0.15
SYN3-204ENST00000441821 PCNTO95613 3336 aa14.09□□□□□ -0.15
SYN3-204ENST00000441821 INSRP06213 1382 aa14.09□□□□□ -0.15
SYN3-204ENST00000441821 SLC24A1O60721 1099 aa14.08□□□□□ -0.16
SYN3-204ENST00000441821 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
SYN3-204ENST00000441821 PIGBQ92521 554 aa14.08□□□□□ -0.16
SYN3-204ENST00000441821 ITGB4P16144 1822 aa14.08□□□□□ -0.16
SYN3-204ENST00000441821 FYB1O15117 783 aa14.07□□□□□ -0.16
SYN3-204ENST00000441821 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
SYN3-204ENST00000441821 HSP90AB2PQ58FF8 381 aa14.07□□□□□ -0.16
SYN3-204ENST00000441821 TESK2Q96S53 571 aa14.07□□□□□ -0.16
SYN3-204ENST00000441821 KIF24Q5T7B8 1368 aa14.07□□□□□ -0.16
SYN3-204ENST00000441821 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
SYN3-204ENST00000441821 SIK1P57059 783 aa14.06□□□□□ -0.16
SYN3-204ENST00000441821 TGFB2P61812 414 aa14.06□□□□□ -0.16
SYN3-204ENST00000441821 LINC00116Q8NCU8 138 aa14.06□□□□□ -0.16
SYN3-204ENST00000441821 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
SYN3-204ENST00000441821 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
SYN3-204ENST00000441821 FLT4P35916 1363 aa14.05□□□□□ -0.16
SYN3-204ENST00000441821 PXDNLA1KZ92 1463 aa14.05□□□□□ -0.16
SYN3-204ENST00000441821 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
SYN3-204ENST00000441821 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
SYN3-204ENST00000441821 ST20-MTHFSA0A0A6YYL1 179 aa14.04□□□□□ -0.16
SYN3-204ENST00000441821 MMP10P09238 476 aa14.04□□□□□ -0.16
SYN3-204ENST00000441821 GNPATO15228 680 aa14.03□□□□□ -0.16
SYN3-204ENST00000441821 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
SYN3-204ENST00000441821 KIAA1551Q9HCM1 1747 aa14.03□□□□□ -0.16
SYN3-204ENST00000441821 ITPK1Q13572 414 aa14.02□□□□□ -0.17
SYN3-204ENST00000441821 ARHGAP27Q6ZUM4 889 aa14.02□□□□□ -0.17
SYN3-204ENST00000441821 RBM46Q8TBY0 533 aaKnown RBP14.02□□□□□ -0.17
SYN3-204ENST00000441821 NMRK2Q9NPI5 230 aa14.02□□□□□ -0.17
SYN3-204ENST00000441821 SPG7Q9UQ90 795 aa14.02□□□□□ -0.17
SYN3-204ENST00000441821 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 A0A0G2JLW4 131 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 ATP6V1AP38606 617 aa14.01□□□□□ -0.17
SYN3-204ENST00000441821 NLGN1Q8N2Q7 840 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms