RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
UBE2D4-204ENST00000440899 INSRP06213 1382 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 USHBP1Q8N6Y0 703 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
UBE2D4-204ENST00000440899 FLT4P35916 1363 aa16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 MEGF6O75095 1541 aa16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 AKT1S1Q96B36 256 aa16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 PAPPAQ13219 1627 aa16.15■□□□□ 0.18
UBE2D4-204ENST00000440899 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
UBE2D4-204ENST00000440899 FHDC1Q9C0D6 1143 aaPredicted RBP16.14■□□□□ 0.17
UBE2D4-204ENST00000440899 UTRNP46939 3433 aa16.13■□□□□ 0.17
UBE2D4-204ENST00000440899 ARXQ96QS3 562 aa16.13■□□□□ 0.17
UBE2D4-204ENST00000440899 SYT17Q9BSW7 474 aa16.13■□□□□ 0.17
UBE2D4-204ENST00000440899 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
UBE2D4-204ENST00000440899 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
UBE2D4-204ENST00000440899 RGPD2P0DJD1 1756 aa16.12■□□□□ 0.17
UBE2D4-204ENST00000440899 NSD2O96028 1365 aa16.12■□□□□ 0.17
UBE2D4-204ENST00000440899 MYOM1P52179 1685 aa16.11■□□□□ 0.17
UBE2D4-204ENST00000440899 KCNQ4P56696 695 aa16.11■□□□□ 0.17
UBE2D4-204ENST00000440899 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
UBE2D4-204ENST00000440899 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-204ENST00000440899 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
UBE2D4-204ENST00000440899 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
UBE2D4-204ENST00000440899 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-204ENST00000440899 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
UBE2D4-204ENST00000440899 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
UBE2D4-204ENST00000440899 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
UBE2D4-204ENST00000440899 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
UBE2D4-204ENST00000440899 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
UBE2D4-204ENST00000440899 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
UBE2D4-204ENST00000440899 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.16
UBE2D4-204ENST00000440899 CYP27B1O15528 508 aa16.07■□□□□ 0.16
UBE2D4-204ENST00000440899 POLD1P28340 1107 aa16.07■□□□□ 0.16
UBE2D4-204ENST00000440899 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
UBE2D4-204ENST00000440899 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE2D4-204ENST00000440899 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
UBE2D4-204ENST00000440899 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
UBE2D4-204ENST00000440899 MPRIPQ6WCQ1 1025 aa16.04■□□□□ 0.16
UBE2D4-204ENST00000440899 LY75O60449 1722 aa16.04■□□□□ 0.16
UBE2D4-204ENST00000440899 NCAPD2Q15021 1401 aa16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 QSER1Q2KHR3 1735 aa16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 MSH5O43196 834 aa16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 EYA1Q99502 592 aa16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE2D4-204ENST00000440899 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
UBE2D4-204ENST00000440899 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
UBE2D4-204ENST00000440899 GOLGB1Q14789 3259 aaKnown RBP16.02■□□□□ 0.15
UBE2D4-204ENST00000440899 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
UBE2D4-204ENST00000440899 FLAD1Q8NFF5 587 aa16.01■□□□□ 0.15
UBE2D4-204ENST00000440899 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
UBE2D4-204ENST00000440899 GPR162Q16538 588 aa16■□□□□ 0.15
UBE2D4-204ENST00000440899 KLHL34Q8N239 644 aa16■□□□□ 0.15
UBE2D4-204ENST00000440899 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
UBE2D4-204ENST00000440899 PIGBQ92521 554 aa16■□□□□ 0.15
UBE2D4-204ENST00000440899 EIF4A2Q14240 407 aaKnown RBP15.99■□□□□ 0.15
UBE2D4-204ENST00000440899 PANK3Q9H999 370 aa15.99■□□□□ 0.15
UBE2D4-204ENST00000440899 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
UBE2D4-204ENST00000440899 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
UBE2D4-204ENST00000440899 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
UBE2D4-204ENST00000440899 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
UBE2D4-204ENST00000440899 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
UBE2D4-204ENST00000440899 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
UBE2D4-204ENST00000440899 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
UBE2D4-204ENST00000440899 TMOD3Q9NYL9 352 aa15.97■□□□□ 0.15
UBE2D4-204ENST00000440899 PHKG2P15735 406 aa15.96■□□□□ 0.15
UBE2D4-204ENST00000440899 AK7Q96M32 723 aa15.96■□□□□ 0.15
UBE2D4-204ENST00000440899 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
UBE2D4-204ENST00000440899 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
UBE2D4-204ENST00000440899 NLGN2Q8NFZ4 835 aa15.95■□□□□ 0.14
UBE2D4-204ENST00000440899 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 SIK1P57059 783 aa15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 C5P01031 1676 aa15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 IGSF1Q8N6C5 1336 aa15.94■□□□□ 0.14
UBE2D4-204ENST00000440899 MORC1Q86VD1 984 aa15.93■□□□□ 0.14
UBE2D4-204ENST00000440899 ASAP1Q9ULH1 1129 aa15.93■□□□□ 0.14
UBE2D4-204ENST00000440899 ITGB4P16144 1822 aa15.93■□□□□ 0.14
UBE2D4-204ENST00000440899 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
UBE2D4-204ENST00000440899 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 ERVV-2B6SEH9 535 aa15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 SSFA2P28290 1259 aa15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 CD2APQ9Y5K6 639 aa15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 CHD4Q14839 1912 aa15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
UBE2D4-204ENST00000440899 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
UBE2D4-204ENST00000440899 PHF14O94880 888 aa15.9■□□□□ 0.14
UBE2D4-204ENST00000440899 ATP6V1AP38606 617 aa15.9■□□□□ 0.14
UBE2D4-204ENST00000440899 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
UBE2D4-204ENST00000440899 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
UBE2D4-204ENST00000440899 DCAF5Q96JK2 942 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms