RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 APAF1O14727 1248 aa5.65□□□□□ -1.51
SCN3A-204ENST00000440431 MSH5O43196 834 aa5.65□□□□□ -1.51
SCN3A-204ENST00000440431 HTATSF1O43719 755 aaKnown RBP5.64□□□□□ -1.51
SCN3A-204ENST00000440431 RIPK4P57078 832 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 PHACTR3Q96KR7 559 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 NCOA3Q9Y6Q9 1424 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 CT47B1P0C2W7 299 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-204ENST00000440431 HSPA2P54652 639 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 IRX6P78412 446 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-204ENST00000440431 CCDC27Q2M243 656 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 CHMP3Q9Y3E7 222 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 KIF3AQ9Y496 699 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 SHANK3Q9BYB0 1731 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 TCERG1O14776 1098 aaKnown RBP5.64□□□□□ -1.51
SCN3A-204ENST00000440431 PTMSP20962 102 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 RGS3P49796 1198 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 CCDC34Q96HJ3 373 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 KDRP35968 1356 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 DCCP43146 1447 aa5.64□□□□□ -1.51
SCN3A-204ENST00000440431 ZNF428Q96B54 188 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 PRDM11Q9NQV5 511 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 TOM1O60784 492 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 FRAT2O75474 233 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-204ENST00000440431 RRS1Q15050 365 aaKnown RBP5.63□□□□□ -1.51
SCN3A-204ENST00000440431 SLC4A10Q6U841 1118 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 NOL10Q9BSC4 688 aaKnown RBP5.63□□□□□ -1.51
SCN3A-204ENST00000440431 DDX19BQ9UMR2 479 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 HSCBQ8IWL3 235 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 ORAI2Q96SN7 254 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 C9orf78Q9NZ63 289 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-204ENST00000440431 TSPYL4Q9UJ04 414 aa5.63□□□□□ -1.51
SCN3A-204ENST00000440431 GLI3P10071 1580 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 C20orf194Q5TEA3 1177 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 AMOTL1Q8IY63 956 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 TCP11L2Q8N4U5 519 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 MAP3K19Q56UN5 1328 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 PHF8Q9UPP1 1060 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 USP19O94966 1318 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 TMEM94Q12767 1356 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 NRDCO43847 1150 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 EIF4A2Q14240 407 aaKnown RBP5.62□□□□□ -1.51
SCN3A-204ENST00000440431 RUFY2Q8WXA3 655 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 TTC21AQ8NDW8 1320 aa5.62□□□□□ -1.51
SCN3A-204ENST00000440431 GOLGA6L4A6NEF3 574 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 DEKP35659 375 aaKnown RBP5.61□□□□□ -1.51
SCN3A-204ENST00000440431 CCDC30Q5VVM6 783 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 HSP90AB2PQ58FF8 381 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 TOM1L2Q6ZVM7 507 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
SCN3A-204ENST00000440431 MSH6P52701 1360 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 KDM3BQ7LBC6 1761 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 FCHSD2O94868 740 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 ZNF853P0CG23 659 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 AMOTQ4VCS5 1084 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 AEBP1Q8IUX7 1158 aa5.61□□□□□ -1.51
SCN3A-204ENST00000440431 GNAI3P08754 354 aa5.6□□□□□ -1.51
SCN3A-204ENST00000440431 TMPOP42166 694 aaKnown RBP5.6□□□□□ -1.51
SCN3A-204ENST00000440431 CRB1P82279 1406 aa5.6□□□□□ -1.51
SCN3A-204ENST00000440431 GOLGA6L6A8MZA4 724 aa5.6□□□□□ -1.51
SCN3A-204ENST00000440431 G3BP1Q13283 466 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCN3A-204ENST00000440431 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
SCN3A-204ENST00000440431 NAP1L2Q9ULW6 460 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-204ENST00000440431 N4BP2Q86UW6 1770 aaPredicted RBP5.6□□□□□ -1.51
SCN3A-204ENST00000440431 PKD1L3Q7Z443 1732 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 COL16A1Q07092 1604 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 SBNO1A3KN83 1393 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 IGSF1Q8N6C5 1336 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 RRP1P56182 461 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 WDR63Q8IWG1 891 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 DDX17Q92841 729 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 ZNF335Q9H4Z2 1342 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 EIF2S2P20042 333 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 FKBP5Q13451 457 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 CPLX2Q6PUV4 134 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 KIF6Q6ZMV9 814 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 RIC3Q7Z5B4 369 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 COL22A1Q8NFW1 1626 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 NPHP3Q7Z494 1330 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 GNL2Q13823 731 aaKnown RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 CENPQQ7L2Z9 268 aaPredicted RBP5.59□□□□□ -1.51
SCN3A-204ENST00000440431 TNNQ9UQP3 1299 aa5.59□□□□□ -1.51
SCN3A-204ENST00000440431 KIF24Q5T7B8 1368 aa5.59□□□□□ -1.52
SCN3A-204ENST00000440431 PLIN1O60240 522 aa5.59□□□□□ -1.52
SCN3A-204ENST00000440431 CABP4P57796 275 aa5.59□□□□□ -1.52
SCN3A-204ENST00000440431 CSPP1Q1MSJ5 1256 aa5.59□□□□□ -1.52
SCN3A-204ENST00000440431 ZNF530Q6P9A1 599 aaPredicted RBP5.59□□□□□ -1.52
SCN3A-204ENST00000440431 ISY1Q9ULR0 285 aaKnown RBP5.59□□□□□ -1.52
SCN3A-204ENST00000440431 AXIN2Q9Y2T1 843 aa5.59□□□□□ -1.52
SCN3A-204ENST00000440431 TRIM6-TRIM34B2RNG4 842 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 ERC2O15083 957 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 ARHGEF10O15013 1369 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 ABCC6O95255 1503 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 BCAR3O75815 825 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 HOXC9P31274 260 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 STRN4Q9NRL3 753 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 C19orf44Q9H6X5 657 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 RGS12O14924 1447 aa5.58□□□□□ -1.52
SCN3A-204ENST00000440431 FANCIQ9NVI1 1328 aa5.57□□□□□ -1.52
SCN3A-204ENST00000440431 PRKAR2BP31323 418 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms