RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 WASHC2AQ641Q2 1341 aa28.5■■■□□ 2.15
VIL1-204ENST00000440053 TATP17735 454 aaPredicted RBP28.47■■■□□ 2.15
VIL1-204ENST00000440053 PRIM1P49642 420 aaKnown RBP28.46■■■□□ 2.15
VIL1-204ENST00000440053 NHSQ6T4R5 1651 aa28.46■■■□□ 2.15
VIL1-204ENST00000440053 SYTL4Q96C24 671 aaPredicted RBP28.46■■■□□ 2.15
VIL1-204ENST00000440053 MAP2P11137 1827 aaKnown RBP28.46■■■□□ 2.15
VIL1-204ENST00000440053 EYA1Q99502 592 aa28.45■■■□□ 2.14
VIL1-204ENST00000440053 KNSTRNQ9Y448 316 aa28.44■■■□□ 2.14
VIL1-204ENST00000440053 MORC1Q86VD1 984 aa28.43■■■□□ 2.14
VIL1-204ENST00000440053 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
VIL1-204ENST00000440053 RGPD3A6NKT7 1758 aaPredicted RBP28.43■■■□□ 2.14
VIL1-204ENST00000440053 RGPD4Q7Z3J3 1758 aa28.43■■■□□ 2.14
VIL1-204ENST00000440053 EIF4A2Q14240 407 aaKnown RBP28.41■■■□□ 2.14
VIL1-204ENST00000440053 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
VIL1-204ENST00000440053 SHANK3Q9BYB0 1731 aa28.41■■■□□ 2.14
VIL1-204ENST00000440053 LRRC4BQ9NT99 713 aa28.4■■■□□ 2.14
VIL1-204ENST00000440053 LRP5O75197 1615 aa28.39■■■□□ 2.14
VIL1-204ENST00000440053 ANKRD26Q9UPS8 1709 aa28.39■■■□□ 2.13
VIL1-204ENST00000440053 BTAF1O14981 1849 aa28.38■■■□□ 2.13
VIL1-204ENST00000440053 CYP27B1O15528 508 aa28.38■■■□□ 2.13
VIL1-204ENST00000440053 AMER1Q5JTC6 1135 aaPredicted RBP28.38■■■□□ 2.13
VIL1-204ENST00000440053 KCNQ4P56696 695 aa28.37■■■□□ 2.13
VIL1-204ENST00000440053 NSD2O96028 1365 aa28.37■■■□□ 2.13
VIL1-204ENST00000440053 SLC15A2Q16348 729 aa28.36■■■□□ 2.13
VIL1-204ENST00000440053 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
VIL1-204ENST00000440053 PER1O15534 1290 aaPredicted RBP28.35■■■□□ 2.13
VIL1-204ENST00000440053 PCDH11XQ9BZA7 1347 aa28.34■■■□□ 2.13
VIL1-204ENST00000440053 PCDH11YQ9BZA8 1340 aa28.34■■■□□ 2.13
VIL1-204ENST00000440053 NCAPD2Q15021 1401 aa28.34■■■□□ 2.13
VIL1-204ENST00000440053 DOT1LQ8TEK3 1739 aa28.32■■■□□ 2.12
VIL1-204ENST00000440053 CNGB1Q14028 1251 aaPredicted RBP28.31■■■□□ 2.12
VIL1-204ENST00000440053 ZNF827Q17R98 1081 aa28.3■■■□□ 2.12
VIL1-204ENST00000440053 CC2D1BQ5T0F9 858 aaKnown RBP28.3■■■□□ 2.12
VIL1-204ENST00000440053 SPON1Q9HCB6 807 aa28.3■■■□□ 2.12
VIL1-204ENST00000440053 ZBTB7AO95365 584 aa28.29■■■□□ 2.12
VIL1-204ENST00000440053 SPG7Q9UQ90 795 aa28.29■■■□□ 2.12
VIL1-204ENST00000440053 MPRIPQ6WCQ1 1025 aa28.27■■■□□ 2.12
VIL1-204ENST00000440053 ATF5Q9Y2D1 282 aaPredicted RBP28.27■■■□□ 2.12
VIL1-204ENST00000440053 IGSF1Q8N6C5 1336 aa28.26■■■□□ 2.12
VIL1-204ENST00000440053 SLC27A3Q5K4L6 730 aa28.26■■■□□ 2.11
VIL1-204ENST00000440053 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
VIL1-204ENST00000440053 AKT1S1Q96B36 256 aa28.24■■■□□ 2.11
VIL1-204ENST00000440053 AEBP1Q8IUX7 1158 aa28.23■■■□□ 2.11
VIL1-204ENST00000440053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.23■■■□□ 2.117e-9■□□□□ 11.2
VIL1-204ENST00000440053 CASZ1Q86V15 1759 aa28.23■■■□□ 2.11
VIL1-204ENST00000440053 PHKG2P15735 406 aa28.22■■■□□ 2.11
VIL1-204ENST00000440053 MTHFSP49914 203 aa28.22■■■□□ 2.11
VIL1-204ENST00000440053 CCNL1Q9UK58 526 aaPredicted RBP28.22■■■□□ 2.11
VIL1-204ENST00000440053 PAPPAQ13219 1627 aa28.22■■■□□ 2.11
VIL1-204ENST00000440053 PKD1L3Q7Z443 1732 aa28.22■■■□□ 2.11
VIL1-204ENST00000440053 IL13P35225 146 aa28.21■■■□□ 2.11
VIL1-204ENST00000440053 PIGBQ92521 554 aa28.21■■■□□ 2.11
VIL1-204ENST00000440053 IFNL2Q8IZJ0 200 aa28.21■■■□□ 2.11
VIL1-204ENST00000440053 PPP1R1BQ9UD71 204 aaPredicted RBP28.21■■■□□ 2.11
VIL1-204ENST00000440053 PTGER2P43116 358 aa28.18■■■□□ 2.1
VIL1-204ENST00000440053 SULT6B1Q6IMI4 303 aa28.18■■■□□ 2.1
VIL1-204ENST00000440053 TOGARAM1Q9Y4F4 1720 aa28.18■■■□□ 2.1
VIL1-204ENST00000440053 TFCP2L1Q9NZI6 479 aa28.15■■■□□ 2.1
VIL1-204ENST00000440053 LY75O60449 1722 aa28.15■■■□□ 2.1
VIL1-204ENST00000440053 PLEKHO1Q53GL0 409 aaPredicted RBP28.15■■■□□ 2.1
VIL1-204ENST00000440053 PALLDQ8WX93 1383 aa28.14■■■□□ 2.1
VIL1-204ENST00000440053 MTFR1LQ9H019 292 aa28.14■■■□□ 2.09
VIL1-204ENST00000440053 PNPLA7Q6ZV29 1317 aa28.13■■■□□ 2.09
VIL1-204ENST00000440053 ZNF530Q6P9A1 599 aaPredicted RBP28.12■■■□□ 2.09
VIL1-204ENST00000440053 TMOD3Q9NYL9 352 aa28.12■■■□□ 2.09
VIL1-204ENST00000440053 ASAP1Q9ULH1 1129 aa28.12■■■□□ 2.09
VIL1-204ENST00000440053 ITGB4P16144 1822 aa28.11■■■□□ 2.09
VIL1-204ENST00000440053 SGIP1Q9BQI5 828 aa28.1■■■□□ 2.09
VIL1-204ENST00000440053 HMOX1P09601 288 aa28.09■■■□□ 2.09
VIL1-204ENST00000440053 SMARCC1Q92922 1105 aaPredicted RBP28.09■■■□□ 2.09
VIL1-204ENST00000440053 NPC1L1Q9UHC9 1359 aa28.09■■■□□ 2.09
VIL1-204ENST00000440053 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
VIL1-204ENST00000440053 DIAPH1O60610 1272 aaKnown RBP28.07■■■□□ 2.08
VIL1-204ENST00000440053 ATG3Q9NT62 314 aa28.07■■■□□ 2.08
VIL1-204ENST00000440053 KDRP35968 1356 aa28.06■■■□□ 2.08
VIL1-204ENST00000440053 SMIM5Q71RC9 77 aa28.06■■■□□ 2.08
VIL1-204ENST00000440053 COL23A1Q86Y22 540 aaPredicted RBP28.06■■■□□ 2.08
VIL1-204ENST00000440053 DCAF5Q96JK2 942 aa28.05■■■□□ 2.08
VIL1-204ENST00000440053 MSH5O43196 834 aa28.04■■■□□ 2.08
VIL1-204ENST00000440053 PLEKHG2Q9H7P9 1386 aa28.04■■■□□ 2.08
VIL1-204ENST00000440053 LOC102724428A0A0B4J2F2 783 aa28.03■■■□□ 2.08
VIL1-204ENST00000440053 ERVV-2B6SEH9 535 aa28.03■■■□□ 2.08
VIL1-204ENST00000440053 HSP90AB1P08238 724 aaKnown RBP28.03■■■□□ 2.08
VIL1-204ENST00000440053 SIK1P57059 783 aa28.03■■■□□ 2.08
VIL1-204ENST00000440053 C1orf141Q5JVX7 400 aa28.02■■■□□ 2.08
VIL1-204ENST00000440053 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
VIL1-204ENST00000440053 SLC16A10Q8TF71 515 aa28.02■■■□□ 2.08
VIL1-204ENST00000440053 KDM6AO15550 1401 aaPredicted RBP28.02■■■□□ 2.08
VIL1-204ENST00000440053 ARXQ96QS3 562 aa28.02■■■□□ 2.08
VIL1-204ENST00000440053 FHDC1Q9C0D6 1143 aaPredicted RBP28.02■■■□□ 2.08
VIL1-204ENST00000440053 TUBGCP6Q96RT7 1819 aa28.01■■■□□ 2.08
VIL1-204ENST00000440053 CABP4P57796 275 aa28.01■■■□□ 2.07
VIL1-204ENST00000440053 ITPK1Q13572 414 aa28.01■■■□□ 2.07
VIL1-204ENST00000440053 LINC00116Q8NCU8 138 aa28■■■□□ 2.07
VIL1-204ENST00000440053 ATP6V1AP38606 617 aa27.99■■■□□ 2.07
VIL1-204ENST00000440053 SYT17Q9BSW7 474 aa27.99■■■□□ 2.07
VIL1-204ENST00000440053 NFATC2IPQ8NCF5 419 aa27.98■■■□□ 2.07
VIL1-204ENST00000440053 SLC4A9Q96Q91 983 aa27.98■■■□□ 2.07
VIL1-204ENST00000440053 C5P01031 1676 aa27.98■■■□□ 2.07
VIL1-204ENST00000440053 U2SURPO15042 1029 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms