RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
PDE4A-204ENST00000440014 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
PDE4A-204ENST00000440014 SLC26A8Q96RN1 970 aa16.28■□□□□ 0.2
PDE4A-204ENST00000440014 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
PDE4A-204ENST00000440014 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.28■□□□□ 0.2
PDE4A-204ENST00000440014 PKP1Q13835 747 aa16.27■□□□□ 0.2
PDE4A-204ENST00000440014 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
PDE4A-204ENST00000440014 ALKQ9UM73 1620 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 UQCRHLA0A096LP55 91 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 VAMP4O75379 141 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 PRPF40AO75400 957 aaKnown RBP16.26■□□□□ 0.19
PDE4A-204ENST00000440014 UQCRHP07919 91 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDE4A-204ENST00000440014 PLEKHM2Q8IWE5 1019 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 ZKSCAN5Q9Y2L8 839 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 ABCC4O15439 1325 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 FYB1O15117 783 aa16.26■□□□□ 0.19
PDE4A-204ENST00000440014 FCHSD2O94868 740 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 SRPK2P78362 688 aaKnown RBP16.25■□□□□ 0.19
PDE4A-204ENST00000440014 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 RBM27Q9P2N5 1060 aaKnown RBP16.25■□□□□ 0.19
PDE4A-204ENST00000440014 MCM5P33992 734 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
PDE4A-204ENST00000440014 SETD1AO15047 1707 aaKnown RBP16.24■□□□□ 0.19
PDE4A-204ENST00000440014 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
PDE4A-204ENST00000440014 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
PDE4A-204ENST00000440014 INTS3Q68E01 1043 aaKnown RBP16.24■□□□□ 0.19
PDE4A-204ENST00000440014 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
PDE4A-204ENST00000440014 ST18O60284 1047 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 TERF2IPQ9NYB0 399 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 METP08581 1390 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 LRSAM1Q6UWE0 723 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 ZGPATQ8N5A5 531 aaKnown RBP16.23■□□□□ 0.19
PDE4A-204ENST00000440014 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
PDE4A-204ENST00000440014 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
PDE4A-204ENST00000440014 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
PDE4A-204ENST00000440014 MTERF4Q7Z6M4 381 aaKnown RBP16.22■□□□□ 0.19
PDE4A-204ENST00000440014 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
PDE4A-204ENST00000440014 TMEM63CQ9P1W3 806 aa16.21■□□□□ 0.19
PDE4A-204ENST00000440014 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.18
PDE4A-204ENST00000440014 SYCE3A1L190 88 aa16.21■□□□□ 0.18
PDE4A-204ENST00000440014 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.18
PDE4A-204ENST00000440014 DCTPP1Q9H773 170 aa16.21■□□□□ 0.18
PDE4A-204ENST00000440014 ZDHHC9Q9Y397 364 aa16.21■□□□□ 0.18
PDE4A-204ENST00000440014 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
PDE4A-204ENST00000440014 ATAD2Q6PL18 1390 aa16.2■□□□□ 0.18
PDE4A-204ENST00000440014 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
PDE4A-204ENST00000440014 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
PDE4A-204ENST00000440014 API5Q9BZZ5 524 aaKnown RBP16.2■□□□□ 0.18
PDE4A-204ENST00000440014 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
PDE4A-204ENST00000440014 KCNA6P17658 529 aa16.2■□□□□ 0.18
PDE4A-204ENST00000440014 GNAI1P63096 354 aa16.2■□□□□ 0.18
PDE4A-204ENST00000440014 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
PDE4A-204ENST00000440014 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
PDE4A-204ENST00000440014 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
PDE4A-204ENST00000440014 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
PDE4A-204ENST00000440014 NWD1Q149M9 1564 aa16.19■□□□□ 0.18
PDE4A-204ENST00000440014 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
PDE4A-204ENST00000440014 TWISTNBQ3B726 338 aaPredicted RBP16.18■□□□□ 0.18
PDE4A-204ENST00000440014 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
PDE4A-204ENST00000440014 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
PDE4A-204ENST00000440014 PHACTR3Q96KR7 559 aa16.18■□□□□ 0.18
PDE4A-204ENST00000440014 ARID3AQ99856 593 aa16.18■□□□□ 0.18
PDE4A-204ENST00000440014 STK26Q9P289 416 aa16.18■□□□□ 0.18
PDE4A-204ENST00000440014 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 MBD3O95983 291 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 SDSP20132 328 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
PDE4A-204ENST00000440014 KIF24Q5T7B8 1368 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 REC8O95072 547 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
PDE4A-204ENST00000440014 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
PDE4A-204ENST00000440014 RNF214Q8ND24 703 aa16.16■□□□□ 0.18
PDE4A-204ENST00000440014 OTUD7AQ8TE49 926 aaPredicted RBP16.16■□□□□ 0.18
PDE4A-204ENST00000440014 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
PDE4A-204ENST00000440014 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
PDE4A-204ENST00000440014 LTBP4Q8N2S1 1624 aa16.16■□□□□ 0.18
PDE4A-204ENST00000440014 HMOX1P09601 288 aa16.16■□□□□ 0.18
PDE4A-204ENST00000440014 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
PDE4A-204ENST00000440014 YTHDC2Q9H6S0 1430 aaKnown RBP16.15■□□□□ 0.18
PDE4A-204ENST00000440014 MINK1Q8N4C8 1332 aaPredicted RBP16.15■□□□□ 0.18
PDE4A-204ENST00000440014 PTMAP06454 111 aaKnown RBP16.14■□□□□ 0.18
PDE4A-204ENST00000440014 FOXD4L5Q5VV16 416 aaPredicted RBP16.14■□□□□ 0.18
PDE4A-204ENST00000440014 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.18
PDE4A-204ENST00000440014 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.18
PDE4A-204ENST00000440014 FOXD4L4Q8WXT5 416 aaPredicted RBP16.14■□□□□ 0.18
PDE4A-204ENST00000440014 CPS1P31327 1500 aa16.14■□□□□ 0.17
PDE4A-204ENST00000440014 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
PDE4A-204ENST00000440014 TECPR2O15040 1411 aa16.14■□□□□ 0.17
PDE4A-204ENST00000440014 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
PDE4A-204ENST00000440014 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
PDE4A-204ENST00000440014 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
PDE4A-204ENST00000440014 ERC2O15083 957 aa16.12■□□□□ 0.17
PDE4A-204ENST00000440014 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
PDE4A-204ENST00000440014 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms