RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 SHANK3Q9BYB0 1731 aa22.22■■□□□ 1.15
ITGB1-207ENST00000439974 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
ITGB1-207ENST00000439974 CARD14Q9BXL6 1004 aa22.21■■□□□ 1.15
ITGB1-207ENST00000439974 INSRP06213 1382 aa22.21■■□□□ 1.15
ITGB1-207ENST00000439974 FLT4P35916 1363 aa22.21■■□□□ 1.15
ITGB1-207ENST00000439974 CGNL1Q0VF96 1302 aa22.2■■□□□ 1.14
ITGB1-207ENST00000439974 DOT1LQ8TEK3 1739 aa22.2■■□□□ 1.14
ITGB1-207ENST00000439974 HSP90AB2PQ58FF8 381 aa22.19■■□□□ 1.14
ITGB1-207ENST00000439974 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
ITGB1-207ENST00000439974 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
ITGB1-207ENST00000439974 RAPGEF4Q8WZA2 1011 aa22.18■■□□□ 1.14
ITGB1-207ENST00000439974 SYTL4Q96C24 671 aaPredicted RBP22.18■■□□□ 1.14
ITGB1-207ENST00000439974 ATF5Q9Y2D1 282 aaPredicted RBP22.18■■□□□ 1.14
ITGB1-207ENST00000439974 PTGER2P43116 358 aa22.17■■□□□ 1.14
ITGB1-207ENST00000439974 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
ITGB1-207ENST00000439974 MTFR1LQ9H019 292 aa22.17■■□□□ 1.14
ITGB1-207ENST00000439974 LRRC4BQ9NT99 713 aa22.17■■□□□ 1.14
ITGB1-207ENST00000439974 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
ITGB1-207ENST00000439974 ZNF827Q17R98 1081 aa22.15■■□□□ 1.14
ITGB1-207ENST00000439974 NSD2O96028 1365 aa22.14■■□□□ 1.14
ITGB1-207ENST00000439974 DCAF8L1A6NGE4 600 aa22.14■■□□□ 1.13
ITGB1-207ENST00000439974 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.13
ITGB1-207ENST00000439974 LY75O60449 1722 aa22.12■■□□□ 1.13
ITGB1-207ENST00000439974 AKT1S1Q96B36 256 aa22.12■■□□□ 1.13
ITGB1-207ENST00000439974 PCDH11XQ9BZA7 1347 aa22.11■■□□□ 1.13
ITGB1-207ENST00000439974 PCDH11YQ9BZA8 1340 aa22.11■■□□□ 1.13
ITGB1-207ENST00000439974 SGIP1Q9BQI5 828 aa22.11■■□□□ 1.13
ITGB1-207ENST00000439974 ANKRD26Q9UPS8 1709 aa22.11■■□□□ 1.13
ITGB1-207ENST00000439974 QSER1Q2KHR3 1735 aa22.1■■□□□ 1.13
ITGB1-207ENST00000439974 KIF7Q2M1P5 1343 aa22.09■■□□□ 1.13
ITGB1-207ENST00000439974 MAP2P11137 1827 aaKnown RBP22.09■■□□□ 1.13
ITGB1-207ENST00000439974 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
ITGB1-207ENST00000439974 WASHC2AQ641Q2 1341 aa22.07■■□□□ 1.12
ITGB1-207ENST00000439974 NCAPD2Q15021 1401 aa22.07■■□□□ 1.12
ITGB1-207ENST00000439974 FHDC1Q9C0D6 1143 aaPredicted RBP22.07■■□□□ 1.12
ITGB1-207ENST00000439974 CCNL1Q9UK58 526 aaPredicted RBP22.07■■□□□ 1.12
ITGB1-207ENST00000439974 YY1P25490 414 aa22.06■■□□□ 1.12
ITGB1-207ENST00000439974 KCNQ4P56696 695 aa22.06■■□□□ 1.12
ITGB1-207ENST00000439974 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
ITGB1-207ENST00000439974 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
ITGB1-207ENST00000439974 PNPLA7Q6ZV29 1317 aa22.06■■□□□ 1.12
ITGB1-207ENST00000439974 ARXQ96QS3 562 aa22.05■■□□□ 1.12
ITGB1-207ENST00000439974 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
ITGB1-207ENST00000439974 PANK3Q9H999 370 aa22.05■■□□□ 1.12
ITGB1-207ENST00000439974 TFCP2L1Q9NZI6 479 aa22.05■■□□□ 1.12
ITGB1-207ENST00000439974 TUBGCP6Q96RT7 1819 aa22.05■■□□□ 1.12
ITGB1-207ENST00000439974 CYP27B1O15528 508 aa22.04■■□□□ 1.12
ITGB1-207ENST00000439974 POLKQ9UBT6 870 aa22.04■■□□□ 1.12
ITGB1-207ENST00000439974 EYA1Q99502 592 aa22.02■■□□□ 1.12
ITGB1-207ENST00000439974 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
ITGB1-207ENST00000439974 TOGARAM1Q9Y4F4 1720 aa22■■□□□ 1.11
ITGB1-207ENST00000439974 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
ITGB1-207ENST00000439974 SPG7Q9UQ90 795 aa22■■□□□ 1.11
ITGB1-207ENST00000439974 COL24A1Q17RW2 1714 aa22■■□□□ 1.11
ITGB1-207ENST00000439974 ITGB4P16144 1822 aa21.99■■□□□ 1.11
ITGB1-207ENST00000439974 POLD1P28340 1107 aa21.99■■□□□ 1.11
ITGB1-207ENST00000439974 TNNT2P45379 298 aaPredicted RBP21.99■■□□□ 1.11
ITGB1-207ENST00000439974 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
ITGB1-207ENST00000439974 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
ITGB1-207ENST00000439974 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
ITGB1-207ENST00000439974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.98■■□□□ 1.11
ITGB1-207ENST00000439974 UTRNP46939 3433 aa21.98■■□□□ 1.11
ITGB1-207ENST00000439974 C5P01031 1676 aa21.98■■□□□ 1.11
ITGB1-207ENST00000439974 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
ITGB1-207ENST00000439974 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
ITGB1-207ENST00000439974 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
ITGB1-207ENST00000439974 MSH5O43196 834 aa21.93■■□□□ 1.1
ITGB1-207ENST00000439974 COL23A1Q86Y22 540 aaPredicted RBP21.93■■□□□ 1.1
ITGB1-207ENST00000439974 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
ITGB1-207ENST00000439974 PIGBQ92521 554 aa21.93■■□□□ 1.1
ITGB1-207ENST00000439974 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
ITGB1-207ENST00000439974 KLHL34Q8N239 644 aa21.92■■□□□ 1.1
ITGB1-207ENST00000439974 IGSF1Q8N6C5 1336 aa21.91■■□□□ 1.1
ITGB1-207ENST00000439974 PHKG2P15735 406 aa21.91■■□□□ 1.1
ITGB1-207ENST00000439974 CNGB1Q14028 1251 aaPredicted RBP21.91■■□□□ 1.1
ITGB1-207ENST00000439974 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
ITGB1-207ENST00000439974 TMOD3Q9NYL9 352 aa21.9■■□□□ 1.1
ITGB1-207ENST00000439974 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
ITGB1-207ENST00000439974 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
ITGB1-207ENST00000439974 KNSTRNQ9Y448 316 aa21.89■■□□□ 1.09
ITGB1-207ENST00000439974 CHD4Q14839 1912 aa21.88■■□□□ 1.09
ITGB1-207ENST00000439974 AK7Q96M32 723 aa21.88■■□□□ 1.09
ITGB1-207ENST00000439974 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
ITGB1-207ENST00000439974 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
ITGB1-207ENST00000439974 SIK1P57059 783 aa21.86■■□□□ 1.09
ITGB1-207ENST00000439974 MSL1Q68DK7 614 aa21.86■■□□□ 1.09
ITGB1-207ENST00000439974 GPR162Q16538 588 aa21.85■■□□□ 1.09
ITGB1-207ENST00000439974 UBR3Q6ZT12 1888 aa21.84■■□□□ 1.09
ITGB1-207ENST00000439974 ASAP1Q9ULH1 1129 aa21.84■■□□□ 1.09
ITGB1-207ENST00000439974 PER1O15534 1290 aaPredicted RBP21.83■■□□□ 1.09
ITGB1-207ENST00000439974 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
ITGB1-207ENST00000439974 PLEKHO1Q53GL0 409 aaPredicted RBP21.83■■□□□ 1.09
ITGB1-207ENST00000439974 AMER1Q5JTC6 1135 aaPredicted RBP21.83■■□□□ 1.09
ITGB1-207ENST00000439974 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.09
ITGB1-207ENST00000439974 NLGN2Q8NFZ4 835 aa21.83■■□□□ 1.09
ITGB1-207ENST00000439974 AMOTQ4VCS5 1084 aa21.82■■□□□ 1.08
ITGB1-207ENST00000439974 PHF14O94880 888 aa21.81■■□□□ 1.08
ITGB1-207ENST00000439974 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
ITGB1-207ENST00000439974 LINC00116Q8NCU8 138 aa21.81■■□□□ 1.08
ITGB1-207ENST00000439974 ATG3Q9NT62 314 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms