RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 TRIM35Q9UPQ4 493 aa9.88□□□□□ -0.83
UBR3-205ENST00000439681 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
UBR3-205ENST00000439681 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
UBR3-205ENST00000439681 NRAPQ86VF7 1730 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 NEFMP07197 916 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 RIPK4P57078 832 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 GJD4Q96KN9 370 aaPredicted RBP9.87□□□□□ -0.83
UBR3-205ENST00000439681 TRPC5Q9UL62 973 aaPredicted RBP9.87□□□□□ -0.83
UBR3-205ENST00000439681 DISP2A7MBM2 1401 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 ATRNO75882 1429 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 NGEFQ8N5V2 710 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 GAS2L2Q8NHY3 880 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 RGS17Q9UGC6 210 aaPredicted RBP9.87□□□□□ -0.83
UBR3-205ENST00000439681 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
UBR3-205ENST00000439681 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
UBR3-205ENST00000439681 OVOS2A0A0G2JMS6 1433 aa9.86□□□□□ -0.83
UBR3-205ENST00000439681 PLEKHG2Q9H7P9 1386 aa9.86□□□□□ -0.83
UBR3-205ENST00000439681 ZNF521Q96K83 1311 aa9.86□□□□□ -0.83
UBR3-205ENST00000439681 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
UBR3-205ENST00000439681 ZCRB1Q8TBF4 217 aaKnown RBP9.86□□□□□ -0.83
UBR3-205ENST00000439681 ONECUT3O60422 494 aaPredicted RBP9.85□□□□□ -0.83
UBR3-205ENST00000439681 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
UBR3-205ENST00000439681 CDCA7Q9BWT1 371 aaPredicted RBP9.85□□□□□ -0.83
UBR3-205ENST00000439681 SPG7Q9UQ90 795 aa9.85□□□□□ -0.83
UBR3-205ENST00000439681 ZBED9Q6R2W3 1325 aa9.85□□□□□ -0.83
UBR3-205ENST00000439681 CYP27B1O15528 508 aa9.85□□□□□ -0.83
UBR3-205ENST00000439681 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
UBR3-205ENST00000439681 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
UBR3-205ENST00000439681 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
UBR3-205ENST00000439681 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 EXOC5O00471 708 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 HTATSF1O43719 755 aaKnown RBP9.84□□□□□ -0.83
UBR3-205ENST00000439681 PHKG2P15735 406 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 DCTN1Q14203 1278 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 IL17REQ8NFR9 667 aa9.84□□□□□ -0.83
UBR3-205ENST00000439681 MCM10Q7L590 875 aa9.83□□□□□ -0.84
UBR3-205ENST00000439681 THUMPD2Q9BTF0 503 aaKnown RBP9.83□□□□□ -0.84
UBR3-205ENST00000439681 LGR6Q9HBX8 967 aa9.83□□□□□ -0.84
UBR3-205ENST00000439681 IFNL2Q8IZJ0 200 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
UBR3-205ENST00000439681 MAP3K5Q99683 1374 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 LMOD3Q0VAK6 560 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
UBR3-205ENST00000439681 C1orf141Q5JVX7 400 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 MPRIPQ6WCQ1 1025 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 WDR63Q8IWG1 891 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
UBR3-205ENST00000439681 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.82□□□□□ -0.84
UBR3-205ENST00000439681 PCDH11XQ9BZA7 1347 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 PCDH11YQ9BZA8 1340 aa9.82□□□□□ -0.84
UBR3-205ENST00000439681 GLI3P10071 1580 aa9.81□□□□□ -0.84
UBR3-205ENST00000439681 RBM6P78332 1123 aaKnown RBP9.81□□□□□ -0.84
UBR3-205ENST00000439681 DDB1Q16531 1140 aa9.81□□□□□ -0.84
UBR3-205ENST00000439681 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
UBR3-205ENST00000439681 RNMTO43148 476 aaKnown RBP9.81□□□□□ -0.84
UBR3-205ENST00000439681 SEPT12Q8IYM1 358 aa9.81□□□□□ -0.84
UBR3-205ENST00000439681 MARCH10Q8NA82 808 aaPredicted RBP9.81□□□□□ -0.84
UBR3-205ENST00000439681 RTF1Q92541 710 aaKnown RBP9.81□□□□□ -0.84
UBR3-205ENST00000439681 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 CEMIPQ8WUJ3 1361 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 ZNF853P0CG23 659 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 SLFN5Q08AF3 891 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 PDE3BQ13370 1112 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
UBR3-205ENST00000439681 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
UBR3-205ENST00000439681 IL16Q14005 1332 aa9.79□□□□□ -0.84
UBR3-205ENST00000439681 TNS2Q63HR2 1409 aa9.79□□□□□ -0.84
UBR3-205ENST00000439681 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
UBR3-205ENST00000439681 RXRBP28702 533 aa9.79□□□□□ -0.84
UBR3-205ENST00000439681 KDM6AO15550 1401 aaPredicted RBP9.79□□□□□ -0.84
UBR3-205ENST00000439681 PKD1L3Q7Z443 1732 aa9.78□□□□□ -0.84
UBR3-205ENST00000439681 CHL1O00533 1208 aa9.78□□□□□ -0.84
UBR3-205ENST00000439681 CALD1Q05682 793 aaKnown RBP9.78□□□□□ -0.84
UBR3-205ENST00000439681 A0A0G2JS52 829 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 E9PSI1 815 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 MYT1Q01538 1121 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 TAF7Q15545 349 aaPredicted RBP9.77□□□□□ -0.85
UBR3-205ENST00000439681 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 PARP4Q9UKK3 1724 aaKnown RBP9.77□□□□□ -0.85
UBR3-205ENST00000439681 THSD7AQ9UPZ6 1657 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 NFATC2IPQ8NCF5 419 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 SLC52A2Q9HAB3 445 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 MIS18AQ9NYP9 233 aa9.77□□□□□ -0.85
UBR3-205ENST00000439681 GNAI1P63096 354 aa9.76□□□□□ -0.85
UBR3-205ENST00000439681 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
UBR3-205ENST00000439681 TEFQ10587 303 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 FAM182BQ5T319 152 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
UBR3-205ENST00000439681 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 BABAM1Q9NWV8 329 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 LRRC37A3O60309 1634 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 CABP4P57796 275 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 MYH16Q9H6N6 1097 aa9.75□□□□□ -0.85
UBR3-205ENST00000439681 SHANK3Q9BYB0 1731 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms