RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 SYTL4Q96C24 671 aaPredicted RBP25.9■■□□□ 1.74
CCDC78-204ENST00000439619 USHBP1Q8N6Y0 703 aa25.89■■□□□ 1.74
CCDC78-204ENST00000439619 SLC15A2Q16348 729 aa25.88■■□□□ 1.73
CCDC78-204ENST00000439619 EMILIN1Q9Y6C2 1016 aa25.88■■□□□ 1.73
CCDC78-204ENST00000439619 MEGF6O75095 1541 aa25.87■■□□□ 1.73
CCDC78-204ENST00000439619 PRIM1P49642 420 aaKnown RBP25.85■■□□□ 1.73
CCDC78-204ENST00000439619 SLC27A3Q5K4L6 730 aa25.84■■□□□ 1.73
CCDC78-204ENST00000439619 PCDH11XQ9BZA7 1347 aa25.84■■□□□ 1.73
CCDC78-204ENST00000439619 PCDH11YQ9BZA8 1340 aa25.84■■□□□ 1.73
CCDC78-204ENST00000439619 PANK3Q9H999 370 aa25.83■■□□□ 1.73
CCDC78-204ENST00000439619 WASHC2AQ641Q2 1341 aa25.83■■□□□ 1.73
CCDC78-204ENST00000439619 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
CCDC78-204ENST00000439619 DCAF8L1A6NGE4 600 aa25.79■■□□□ 1.72
CCDC78-204ENST00000439619 ZBTB7AO95365 584 aa25.79■■□□□ 1.72
CCDC78-204ENST00000439619 POLKQ9UBT6 870 aa25.79■■□□□ 1.72
CCDC78-204ENST00000439619 NSD2O96028 1365 aa25.79■■□□□ 1.72
CCDC78-204ENST00000439619 HMGB2P26583 209 aaKnown RBP25.78■■□□□ 1.72
CCDC78-204ENST00000439619 BTAF1O14981 1849 aa25.78■■□□□ 1.72
CCDC78-204ENST00000439619 SPG7Q9UQ90 795 aa25.77■■□□□ 1.72
CCDC78-204ENST00000439619 RGPD2P0DJD1 1756 aa25.77■■□□□ 1.72
CCDC78-204ENST00000439619 MTFR1LQ9H019 292 aa25.76■■□□□ 1.71
CCDC78-204ENST00000439619 KNSTRNQ9Y448 316 aa25.76■■□□□ 1.71
CCDC78-204ENST00000439619 PDGFDQ9GZP0 370 aaPredicted RBP25.75■■□□□ 1.71
CCDC78-204ENST00000439619 LRRC4BQ9NT99 713 aa25.75■■□□□ 1.71
CCDC78-204ENST00000439619 MORC1Q86VD1 984 aa25.74■■□□□ 1.71
CCDC78-204ENST00000439619 ATF5Q9Y2D1 282 aaPredicted RBP25.74■■□□□ 1.71
CCDC78-204ENST00000439619 EYA1Q99502 592 aa25.73■■□□□ 1.71
CCDC78-204ENST00000439619 CASZ1Q86V15 1759 aa25.72■■□□□ 1.71
CCDC78-204ENST00000439619 CCNL1Q9UK58 526 aaPredicted RBP25.72■■□□□ 1.71
CCDC78-204ENST00000439619 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
CCDC78-204ENST00000439619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.71■■□□□ 1.71
CCDC78-204ENST00000439619 CYP27B1O15528 508 aa25.7■■□□□ 1.7
CCDC78-204ENST00000439619 ZNF827Q17R98 1081 aa25.7■■□□□ 1.7
CCDC78-204ENST00000439619 TFCP2L1Q9NZI6 479 aa25.7■■□□□ 1.7
CCDC78-204ENST00000439619 ANKRD26Q9UPS8 1709 aa25.7■■□□□ 1.7
CCDC78-204ENST00000439619 NCAPD2Q15021 1401 aa25.7■■□□□ 1.7
CCDC78-204ENST00000439619 EIF4A2Q14240 407 aaKnown RBP25.69■■□□□ 1.7
CCDC78-204ENST00000439619 MPRIPQ6WCQ1 1025 aa25.69■■□□□ 1.7
CCDC78-204ENST00000439619 AKT1S1Q96B36 256 aa25.69■■□□□ 1.7
CCDC78-204ENST00000439619 SHANK3Q9BYB0 1731 aa25.68■■□□□ 1.7
CCDC78-204ENST00000439619 KAT6BQ8WYB5 2073 aa25.68■■□□□ 1.7
CCDC78-204ENST00000439619 PAPPAQ13219 1627 aa25.68■■□□□ 1.7
CCDC78-204ENST00000439619 SLC16A10Q8TF71 515 aa25.68■■□□□ 1.7
CCDC78-204ENST00000439619 PTGER2P43116 358 aa25.67■■□□□ 1.7
CCDC78-204ENST00000439619 SMARCC1Q92922 1105 aaPredicted RBP25.67■■□□□ 1.7
CCDC78-204ENST00000439619 KCNQ4P56696 695 aa25.65■■□□□ 1.7
CCDC78-204ENST00000439619 NKX1-1Q15270 411 aaPredicted RBP25.65■■□□□ 1.7
CCDC78-204ENST00000439619 IFNL2Q8IZJ0 200 aa25.65■■□□□ 1.7
CCDC78-204ENST00000439619 PLEKHG2Q9H7P9 1386 aa25.65■■□□□ 1.7
CCDC78-204ENST00000439619 KIF7Q2M1P5 1343 aa25.64■■□□□ 1.7
CCDC78-204ENST00000439619 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.7
CCDC78-204ENST00000439619 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
CCDC78-204ENST00000439619 POLD1P28340 1107 aa25.62■■□□□ 1.69
CCDC78-204ENST00000439619 ARXQ96QS3 562 aa25.62■■□□□ 1.69
CCDC78-204ENST00000439619 IGSF1Q8N6C5 1336 aa25.62■■□□□ 1.69
CCDC78-204ENST00000439619 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
CCDC78-204ENST00000439619 TMOD3Q9NYL9 352 aa25.6■■□□□ 1.69
CCDC78-204ENST00000439619 PNPLA7Q6ZV29 1317 aa25.6■■□□□ 1.69
CCDC78-204ENST00000439619 MSH5O43196 834 aa25.59■■□□□ 1.69
CCDC78-204ENST00000439619 PHKG2P15735 406 aa25.59■■□□□ 1.69
CCDC78-204ENST00000439619 PLEKHO1Q53GL0 409 aaPredicted RBP25.59■■□□□ 1.69
CCDC78-204ENST00000439619 HSP90AB1P08238 724 aaKnown RBP25.58■■□□□ 1.69
CCDC78-204ENST00000439619 SGIP1Q9BQI5 828 aa25.58■■□□□ 1.69
CCDC78-204ENST00000439619 FHDC1Q9C0D6 1143 aaPredicted RBP25.58■■□□□ 1.69
CCDC78-204ENST00000439619 LY75O60449 1722 aa25.57■■□□□ 1.68
CCDC78-204ENST00000439619 AMOTQ4VCS5 1084 aa25.57■■□□□ 1.68
CCDC78-204ENST00000439619 AMER1Q5JTC6 1135 aaPredicted RBP25.57■■□□□ 1.68
CCDC78-204ENST00000439619 FLAD1Q8NFF5 587 aa25.57■■□□□ 1.68
CCDC78-204ENST00000439619 PIGBQ92521 554 aa25.57■■□□□ 1.68
CCDC78-204ENST00000439619 SYT17Q9BSW7 474 aa25.56■■□□□ 1.68
CCDC78-204ENST00000439619 DCAF5Q96JK2 942 aa25.53■■□□□ 1.68
CCDC78-204ENST00000439619 AK7Q96M32 723 aa25.53■■□□□ 1.68
CCDC78-204ENST00000439619 QSER1Q2KHR3 1735 aa25.51■■□□□ 1.68
CCDC78-204ENST00000439619 C1orf141Q5JVX7 400 aa25.51■■□□□ 1.67
CCDC78-204ENST00000439619 ZNF530Q6P9A1 599 aaPredicted RBP25.51■■□□□ 1.67
CCDC78-204ENST00000439619 ERVV-2B6SEH9 535 aa25.5■■□□□ 1.67
CCDC78-204ENST00000439619 YY1P25490 414 aa25.5■■□□□ 1.67
CCDC78-204ENST00000439619 SULT6B1Q6IMI4 303 aa25.5■■□□□ 1.67
CCDC78-204ENST00000439619 COL23A1Q86Y22 540 aaPredicted RBP25.5■■□□□ 1.67
CCDC78-204ENST00000439619 KLHL34Q8N239 644 aa25.5■■□□□ 1.67
CCDC78-204ENST00000439619 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
CCDC78-204ENST00000439619 LOC102724428A0A0B4J2F2 783 aa25.49■■□□□ 1.67
CCDC78-204ENST00000439619 SIK1P57059 783 aa25.49■■□□□ 1.67
CCDC78-204ENST00000439619 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
CCDC78-204ENST00000439619 TOGARAM1Q9Y4F4 1720 aa25.49■■□□□ 1.67
CCDC78-204ENST00000439619 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
CCDC78-204ENST00000439619 IL13P35225 146 aa25.48■■□□□ 1.67
CCDC78-204ENST00000439619 MTHFSP49914 203 aa25.48■■□□□ 1.67
CCDC78-204ENST00000439619 ASAP1Q9ULH1 1129 aa25.47■■□□□ 1.67
CCDC78-204ENST00000439619 CABP4P57796 275 aa25.46■■□□□ 1.67
CCDC78-204ENST00000439619 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
CCDC78-204ENST00000439619 C5P01031 1676 aa25.45■■□□□ 1.67
CCDC78-204ENST00000439619 ATP6V1AP38606 617 aa25.45■■□□□ 1.66
CCDC78-204ENST00000439619 ATG3Q9NT62 314 aa25.44■■□□□ 1.66
CCDC78-204ENST00000439619 KDRP35968 1356 aa25.44■■□□□ 1.66
CCDC78-204ENST00000439619 ITGB4P16144 1822 aa25.43■■□□□ 1.66
CCDC78-204ENST00000439619 NPC1L1Q9UHC9 1359 aa25.43■■□□□ 1.66
CCDC78-204ENST00000439619 DIAPH1O60610 1272 aaKnown RBP25.42■■□□□ 1.66
CCDC78-204ENST00000439619 PHF14O94880 888 aa25.41■■□□□ 1.66
CCDC78-204ENST00000439619 SSFA2P28290 1259 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms