RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 KAT6BQ8WYB5 2073 aa28■■■□□ 2.07
UBE2F-212ENST00000439338 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
UBE2F-212ENST00000439338 ACSBG1Q96GR2 724 aa28■■■□□ 2.07
UBE2F-212ENST00000439338 NCAPD2Q15021 1401 aa28■■■□□ 2.07
UBE2F-212ENST00000439338 ZCRB1Q8TBF4 217 aaKnown RBP27.99■■■□□ 2.07
UBE2F-212ENST00000439338 KCNQ2O43526 872 aa27.98■■■□□ 2.07
UBE2F-212ENST00000439338 TATP17735 454 aaPredicted RBP27.98■■■□□ 2.07
UBE2F-212ENST00000439338 EIF4A2Q14240 407 aaKnown RBP27.96■■■□□ 2.07
UBE2F-212ENST00000439338 EYA1Q99502 592 aa27.96■■■□□ 2.07
UBE2F-212ENST00000439338 PSDA5PKW4 1024 aaPredicted RBP27.95■■■□□ 2.06
UBE2F-212ENST00000439338 PLSCR1O15162 318 aa27.95■■■□□ 2.06
UBE2F-212ENST00000439338 CC2D1BQ5T0F9 858 aaKnown RBP27.94■■■□□ 2.06
UBE2F-212ENST00000439338 DOT1LQ8TEK3 1739 aa27.94■■■□□ 2.06
UBE2F-212ENST00000439338 BTAF1O14981 1849 aa27.94■■■□□ 2.06
UBE2F-212ENST00000439338 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
UBE2F-212ENST00000439338 NPC1L1Q9UHC9 1359 aa27.89■■■□□ 2.06
UBE2F-212ENST00000439338 R3HDM1Q15032 1099 aaKnown RBP27.89■■■□□ 2.06
UBE2F-212ENST00000439338 PCDH11XQ9BZA7 1347 aa27.89■■■□□ 2.05
UBE2F-212ENST00000439338 PCDH11YQ9BZA8 1340 aa27.89■■■□□ 2.05
UBE2F-212ENST00000439338 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
UBE2F-212ENST00000439338 IGSF1Q8N6C5 1336 aa27.87■■■□□ 2.05
UBE2F-212ENST00000439338 NBPF14Q5TI25 921 aa27.85■■■□□ 2.05
UBE2F-212ENST00000439338 PROM2Q8N271 834 aa27.85■■■□□ 2.05
UBE2F-212ENST00000439338 TXNRD1Q16881 649 aa27.84■■■□□ 2.05
UBE2F-212ENST00000439338 SYTL4Q96C24 671 aaPredicted RBP27.84■■■□□ 2.05
UBE2F-212ENST00000439338 CYP27B1O15528 508 aa27.83■■■□□ 2.05
UBE2F-212ENST00000439338 PRIM1P49642 420 aaKnown RBP27.83■■■□□ 2.05
UBE2F-212ENST00000439338 MTHFSP49914 203 aa27.82■■■□□ 2.04
UBE2F-212ENST00000439338 SPG7Q9UQ90 795 aa27.81■■■□□ 2.04
UBE2F-212ENST00000439338 TOGARAM1Q9Y4F4 1720 aa27.81■■■□□ 2.04
UBE2F-212ENST00000439338 SRCAPQ6ZRS2 3230 aa27.8■■■□□ 2.04
UBE2F-212ENST00000439338 ANO8Q9HCE9 1232 aaPredicted RBP27.8■■■□□ 2.04
UBE2F-212ENST00000439338 IL13P35225 146 aa27.79■■■□□ 2.04
UBE2F-212ENST00000439338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.78■■■□□ 2.04
UBE2F-212ENST00000439338 AEBP1Q8IUX7 1158 aa27.77■■■□□ 2.04
UBE2F-212ENST00000439338 LRP5O75197 1615 aa27.77■■■□□ 2.04
UBE2F-212ENST00000439338 PLEKHG2Q9H7P9 1386 aa27.76■■■□□ 2.03
UBE2F-212ENST00000439338 ITGB4P16144 1822 aa27.75■■■□□ 2.03
UBE2F-212ENST00000439338 PAPPAQ13219 1627 aa27.74■■■□□ 2.03
UBE2F-212ENST00000439338 SULT6B1Q6IMI4 303 aa27.74■■■□□ 2.03
UBE2F-212ENST00000439338 LY75O60449 1722 aa27.74■■■□□ 2.03
UBE2F-212ENST00000439338 NKX1-1Q15270 411 aaPredicted RBP27.73■■■□□ 2.03
UBE2F-212ENST00000439338 PHKG2P15735 406 aa27.72■■■□□ 2.03
UBE2F-212ENST00000439338 IFNL2Q8IZJ0 200 aa27.72■■■□□ 2.03
UBE2F-212ENST00000439338 KDRP35968 1356 aa27.72■■■□□ 2.03
UBE2F-212ENST00000439338 COL3A1P02461 1466 aaPredicted RBP27.71■■■□□ 2.03
UBE2F-212ENST00000439338 DIAPH1O60610 1272 aaKnown RBP27.7■■■□□ 2.02
UBE2F-212ENST00000439338 LRRC4BQ9NT99 713 aa27.7■■■□□ 2.02
UBE2F-212ENST00000439338 STK32BQ9NY57 414 aa27.7■■■□□ 2.02
UBE2F-212ENST00000439338 PLEKHO1Q53GL0 409 aaPredicted RBP27.69■■■□□ 2.02
UBE2F-212ENST00000439338 MPRIPQ6WCQ1 1025 aa27.69■■■□□ 2.02
UBE2F-212ENST00000439338 CASZ1Q86V15 1759 aa27.68■■■□□ 2.02
UBE2F-212ENST00000439338 SLC15A2Q16348 729 aa27.67■■■□□ 2.02
UBE2F-212ENST00000439338 SLC27A3Q5K4L6 730 aa27.67■■■□□ 2.02
UBE2F-212ENST00000439338 AMOTQ4VCS5 1084 aa27.66■■■□□ 2.02
UBE2F-212ENST00000439338 ZNF530Q6P9A1 599 aaPredicted RBP27.66■■■□□ 2.02
UBE2F-212ENST00000439338 HMOX1P09601 288 aa27.65■■■□□ 2.02
UBE2F-212ENST00000439338 KCNQ4P56696 695 aa27.65■■■□□ 2.02
UBE2F-212ENST00000439338 ZNF827Q17R98 1081 aa27.63■■■□□ 2.01
UBE2F-212ENST00000439338 PIGBQ92521 554 aa27.63■■■□□ 2.01
UBE2F-212ENST00000439338 CCNL1Q9UK58 526 aaPredicted RBP27.63■■■□□ 2.01
UBE2F-212ENST00000439338 PALLDQ8WX93 1383 aa27.62■■■□□ 2.01
UBE2F-212ENST00000439338 PPP2R1AP30153 589 aa27.62■■■□□ 2.01
UBE2F-212ENST00000439338 PDGFDQ9GZP0 370 aaPredicted RBP27.62■■■□□ 2.01
UBE2F-212ENST00000439338 TMOD3Q9NYL9 352 aa27.61■■■□□ 2.01
UBE2F-212ENST00000439338 KDM6AO15550 1401 aaPredicted RBP27.6■■■□□ 2.01
UBE2F-212ENST00000439338 HSP90AB1P08238 724 aaKnown RBP27.6■■■□□ 2.01
UBE2F-212ENST00000439338 U2SURPO15042 1029 aaKnown RBP27.59■■■□□ 2.01
UBE2F-212ENST00000439338 C1orf141Q5JVX7 400 aa27.59■■■□□ 2.01
UBE2F-212ENST00000439338 CFAP53Q96M91 514 aa27.59■■■□□ 2.01
UBE2F-212ENST00000439338 TUBGCP6Q96RT7 1819 aa27.58■■■□□ 2.01
UBE2F-212ENST00000439338 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
UBE2F-212ENST00000439338 SMARCC1Q92922 1105 aaPredicted RBP27.58■■■□□ 2.01
UBE2F-212ENST00000439338 AKT1S1Q96B36 256 aa27.58■■■□□ 2.01
UBE2F-212ENST00000439338 DCAF5Q96JK2 942 aa27.58■■■□□ 2.01
UBE2F-212ENST00000439338 C5P01031 1676 aa27.57■■■□□ 2
UBE2F-212ENST00000439338 QSER1Q2KHR3 1735 aa27.57■■■□□ 2
UBE2F-212ENST00000439338 TAF1LQ8IZX4 1826 aa27.55■■■□□ 2
UBE2F-212ENST00000439338 ERVV-2B6SEH9 535 aa27.55■■■□□ 2
UBE2F-212ENST00000439338 DDX10Q13206 875 aaKnown RBP27.55■■■□□ 2
UBE2F-212ENST00000439338 SPON1Q9HCB6 807 aa27.55■■■□□ 2
UBE2F-212ENST00000439338 ZBTB7AO95365 584 aa27.54■■■□□ 2
UBE2F-212ENST00000439338 SCN11AQ9UI33 1791 aa27.53■■■□□ 2
UBE2F-212ENST00000439338 ASAP1Q9ULH1 1129 aa27.53■■■□□ 2
UBE2F-212ENST00000439338 AKAP4Q5JQC9 854 aa27.52■■■□□ 2
UBE2F-212ENST00000439338 VIRMAQ69YN4 1812 aaKnown RBP27.51■■□□□ 1.99
UBE2F-212ENST00000439338 MTHFSDQ2M296 383 aaKnown RBP27.51■■□□□ 1.99
UBE2F-212ENST00000439338 CABP4P57796 275 aa27.5■■□□□ 1.99
UBE2F-212ENST00000439338 ATG3Q9NT62 314 aa27.5■■□□□ 1.99
UBE2F-212ENST00000439338 TFCP2L1Q9NZI6 479 aa27.5■■□□□ 1.99
UBE2F-212ENST00000439338 NUDCQ9Y266 331 aa27.49■■□□□ 1.99
UBE2F-212ENST00000439338 PNPLA7Q6ZV29 1317 aa27.48■■□□□ 1.99
UBE2F-212ENST00000439338 C4BP0C0L5 1744 aa27.48■■□□□ 1.99
UBE2F-212ENST00000439338 LOC102724428A0A0B4J2F2 783 aa27.48■■□□□ 1.99
UBE2F-212ENST00000439338 SIK1P57059 783 aa27.48■■□□□ 1.99
UBE2F-212ENST00000439338 ATF5Q9Y2D1 282 aaPredicted RBP27.48■■□□□ 1.99
UBE2F-212ENST00000439338 MTFR1LQ9H019 292 aa27.46■■□□□ 1.99
UBE2F-212ENST00000439338 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
UBE2F-212ENST00000439338 ADAMTS7Q9UKP4 1686 aa27.45■■□□□ 1.98
UBE2F-212ENST00000439338 U2AF1L5P0DN76 240 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms