RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TRIM34Q9BYJ4 488 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 VAMP4O75379 141 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 FOXD4L6Q3SYB3 417 aaPredicted RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 FOXD4L3Q6VB84 417 aaPredicted RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 KIF1BO60333 1816 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 C8orf58Q8NAV2 365 aa19.12■□□□□ 0.65
DHFR-201ENST00000439211 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
DHFR-201ENST00000439211 NCKAP5LQ9HCH0 1330 aa19.11■□□□□ 0.65
DHFR-201ENST00000439211 SMARCA5O60264 1052 aaPredicted RBP19.1■□□□□ 0.65
DHFR-201ENST00000439211 MIS18AQ9NYP9 233 aa19.1■□□□□ 0.65
DHFR-201ENST00000439211 MCM10Q7L590 875 aa19.1■□□□□ 0.65
DHFR-201ENST00000439211 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
DHFR-201ENST00000439211 CEP152O94986 1710 aa19.09■□□□□ 0.65
DHFR-201ENST00000439211 ZBTB7BO15156 539 aaPredicted RBP19.09■□□□□ 0.65
DHFR-201ENST00000439211 ST18O60284 1047 aa19.09■□□□□ 0.65
DHFR-201ENST00000439211 KRT24Q2M2I5 525 aa19.09■□□□□ 0.65
DHFR-201ENST00000439211 MRPL50Q8N5N7 158 aaKnown RBP19.09■□□□□ 0.65
DHFR-201ENST00000439211 C16orf71Q8IYS4 520 aaPredicted RBP19.08■□□□□ 0.65
DHFR-201ENST00000439211 EFCAB6Q5THR3 1501 aa19.08■□□□□ 0.65
DHFR-201ENST00000439211 IFT57Q9NWB7 429 aa19.08■□□□□ 0.65
DHFR-201ENST00000439211 NOLC1Q14978 699 aaKnown RBP eCLIP19.08■□□□□ 0.641e-6■■■■□ 20.6
DHFR-201ENST00000439211 POGZQ7Z3K3 1410 aa19.08■□□□□ 0.64
DHFR-201ENST00000439211 HMMRO75330 724 aa19.07■□□□□ 0.64
DHFR-201ENST00000439211 NUCB2P80303 420 aa19.07■□□□□ 0.64
DHFR-201ENST00000439211 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
DHFR-201ENST00000439211 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.07■□□□□ 0.64
DHFR-201ENST00000439211 RILPL2Q969X0 211 aa19.07■□□□□ 0.64
DHFR-201ENST00000439211 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
DHFR-201ENST00000439211 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
DHFR-201ENST00000439211 SLC4A2P04920 1241 aa19.06■□□□□ 0.64
DHFR-201ENST00000439211 CFAP44Q96MT7 982 aa19.06■□□□□ 0.64
DHFR-201ENST00000439211 STK31Q9BXU1 1019 aa19.06■□□□□ 0.64
DHFR-201ENST00000439211 C17orf53Q8N3J3 647 aaPredicted RBP19.06■□□□□ 0.64
DHFR-201ENST00000439211 SYAP1Q96A49 352 aaPredicted RBP19.06■□□□□ 0.64
DHFR-201ENST00000439211 LTV1Q96GA3 475 aaPredicted RBP19.06■□□□□ 0.64
DHFR-201ENST00000439211 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
DHFR-201ENST00000439211 CALCOCO1Q9P1Z2 691 aa19.05■□□□□ 0.64
DHFR-201ENST00000439211 IRX5P78411 483 aaPredicted RBP19.05■□□□□ 0.64
DHFR-201ENST00000439211 ZBTB9Q96C00 473 aa19.04■□□□□ 0.64
DHFR-201ENST00000439211 TTC12Q9H892 705 aaPredicted RBP19.04■□□□□ 0.64
DHFR-201ENST00000439211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.04■□□□□ 0.64
DHFR-201ENST00000439211 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
DHFR-201ENST00000439211 CCDC61Q9Y6R9 512 aa19.04■□□□□ 0.64
DHFR-201ENST00000439211 AMPHP49418 695 aa19.04■□□□□ 0.64
DHFR-201ENST00000439211 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
DHFR-201ENST00000439211 RBM25P49756 843 aaKnown RBP19.03■□□□□ 0.64
DHFR-201ENST00000439211 MYOM1P52179 1685 aa19.03■□□□□ 0.64
DHFR-201ENST00000439211 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
DHFR-201ENST00000439211 REC8O95072 547 aa19.03■□□□□ 0.64
DHFR-201ENST00000439211 TSPY26PQ9H489 355 aa19.03■□□□□ 0.64
DHFR-201ENST00000439211 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
DHFR-201ENST00000439211 RABEP1Q15276 862 aa19.02■□□□□ 0.64
DHFR-201ENST00000439211 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.64
DHFR-201ENST00000439211 NGDNQ8NEJ9 315 aaKnown RBP19.02■□□□□ 0.64
DHFR-201ENST00000439211 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
DHFR-201ENST00000439211 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.63
DHFR-201ENST00000439211 ZNF445P59923 1031 aa19.02■□□□□ 0.63
DHFR-201ENST00000439211 F6X3S4 739 aa19.01■□□□□ 0.63
DHFR-201ENST00000439211 CD2BP2O95400 341 aaKnown RBP19.01■□□□□ 0.63
DHFR-201ENST00000439211 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
DHFR-201ENST00000439211 DRC7Q8IY82 874 aa19.01■□□□□ 0.63
DHFR-201ENST00000439211 ZNF592Q92610 1267 aa19.01■□□□□ 0.63
DHFR-201ENST00000439211 SNX21Q969T3 373 aa19.01■□□□□ 0.63
DHFR-201ENST00000439211 MCCP23508 829 aa19■□□□□ 0.63
DHFR-201ENST00000439211 OTUD7AQ8TE49 926 aaPredicted RBP19■□□□□ 0.63
DHFR-201ENST00000439211 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
DHFR-201ENST00000439211 ANO2Q9NQ90 1003 aa19■□□□□ 0.63
DHFR-201ENST00000439211 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
DHFR-201ENST00000439211 NEK4P51957 841 aa19■□□□□ 0.63
DHFR-201ENST00000439211 SECISBP2LQ93073 1101 aaKnown RBP19■□□□□ 0.63
DHFR-201ENST00000439211 OGFRQ9NZT2 677 aa19■□□□□ 0.63
DHFR-201ENST00000439211 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
DHFR-201ENST00000439211 EXOC6BQ9Y2D4 811 aa18.99■□□□□ 0.63
DHFR-201ENST00000439211 NUTM2GQ5VZR2 741 aa18.99■□□□□ 0.63
DHFR-201ENST00000439211 TSHZ3Q63HK5 1081 aa18.99■□□□□ 0.63
DHFR-201ENST00000439211 USP25Q9UHP3 1055 aa18.99■□□□□ 0.63
DHFR-201ENST00000439211 FEZ1Q99689 392 aa18.98■□□□□ 0.63
DHFR-201ENST00000439211 PPRC1Q5VV67 1664 aaKnown RBP18.98■□□□□ 0.63
DHFR-201ENST00000439211 LRSAM1Q6UWE0 723 aa18.98■□□□□ 0.63
DHFR-201ENST00000439211 MEIS3Q99687 375 aa18.98■□□□□ 0.63
DHFR-201ENST00000439211 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
DHFR-201ENST00000439211 OS9Q13438 667 aaPredicted RBP18.97■□□□□ 0.63
DHFR-201ENST00000439211 ZNF710Q8N1W2 664 aa18.97■□□□□ 0.63
DHFR-201ENST00000439211 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
DHFR-201ENST00000439211 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
DHFR-201ENST00000439211 PHF14O94880 888 aa18.97■□□□□ 0.63
DHFR-201ENST00000439211 PLEKHM2Q8IWE5 1019 aa18.97■□□□□ 0.63
DHFR-201ENST00000439211 IL13P35225 146 aa18.96■□□□□ 0.63
DHFR-201ENST00000439211 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.96■□□□□ 0.63
DHFR-201ENST00000439211 SIRT2Q8IXJ6 389 aa18.96■□□□□ 0.63
DHFR-201ENST00000439211 SPC24Q8NBT2 197 aa18.96■□□□□ 0.63
DHFR-201ENST00000439211 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
DHFR-201ENST00000439211 ABCA9Q8IUA7 1624 aa18.96■□□□□ 0.63
DHFR-201ENST00000439211 ADGRB3O60242 1522 aa18.96■□□□□ 0.63
DHFR-201ENST00000439211 TTC22Q5TAA0 569 aa18.95■□□□□ 0.62
DHFR-201ENST00000439211 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
DHFR-201ENST00000439211 INO80Q9ULG1 1556 aaPredicted RBP18.95■□□□□ 0.62
DHFR-201ENST00000439211 RIOK3O14730 519 aaKnown RBP18.95■□□□□ 0.62
DHFR-201ENST00000439211 SDSP20132 328 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms