RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
UPP2-IT1-201ENST00000439185 A0A1W2PRU2 124 aa9.71□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ERVK-9P63128 1117 aa9.71□□□□□ -0.86
UPP2-IT1-201ENST00000439185 CC2D2BQ6DHV5 1058 aa9.71□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SNRKQ9NRH2 765 aa9.71□□□□□ -0.86
UPP2-IT1-201ENST00000439185 CUEDC1Q9NWM3 386 aaPredicted RBP9.71□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ZNF385CQ66K41 422 aaPredicted RBP9.7□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ADAMTS8Q9UP79 889 aa9.7□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ZNF330Q9Y3S2 320 aaPredicted RBP9.7□□□□□ -0.86
UPP2-IT1-201ENST00000439185 NDUFB9Q9Y6M9 179 aa9.7□□□□□ -0.86
UPP2-IT1-201ENST00000439185 GPR37L1O60883 481 aa9.69□□□□□ -0.86
UPP2-IT1-201ENST00000439185 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
UPP2-IT1-201ENST00000439185 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
UPP2-IT1-201ENST00000439185 PCDHB11Q9Y5F2 797 aa9.69□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SOCS7O14512 581 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SCTRP47872 440 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SVOPQ8N4V2 548 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 NLRP3Q96P20 1036 aa9.68□□□□□ -0.86
UPP2-IT1-201ENST00000439185 GPC1P35052 558 aa9.67□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ESF1Q9H501 851 aaKnown RBP9.67□□□□□ -0.86
UPP2-IT1-201ENST00000439185 GSK3AP49840 483 aa9.66□□□□□ -0.86
UPP2-IT1-201ENST00000439185 POU4F2Q12837 409 aa9.66□□□□□ -0.86
UPP2-IT1-201ENST00000439185 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
UPP2-IT1-201ENST00000439185 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
UPP2-IT1-201ENST00000439185 APBB1O00213 710 aa9.65□□□□□ -0.86
UPP2-IT1-201ENST00000439185 TPRNQ4KMQ1 711 aa9.65□□□□□ -0.86
UPP2-IT1-201ENST00000439185 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
UPP2-IT1-201ENST00000439185 ADAMTS2O95450 1211 aa9.64□□□□□ -0.87
UPP2-IT1-201ENST00000439185 CLN3Q13286 438 aa9.64□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GAS6Q14393 721 aa9.64□□□□□ -0.87
UPP2-IT1-201ENST00000439185 RIPOR1Q6ZS17 1223 aa9.64□□□□□ -0.87
UPP2-IT1-201ENST00000439185 TRAK2O60296 914 aa9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GAS2L1Q99501 681 aaPredicted RBP9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GRIP2Q9C0E4 1043 aa9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
UPP2-IT1-201ENST00000439185 ARHGEF15O94989 841 aa9.62□□□□□ -0.87
UPP2-IT1-201ENST00000439185 DBN1Q16643 649 aa9.62□□□□□ -0.87
UPP2-IT1-201ENST00000439185 CEP126Q9P2H0 1117 aa9.62□□□□□ -0.87
UPP2-IT1-201ENST00000439185 DYRK1BQ9Y463 629 aa9.62□□□□□ -0.87
UPP2-IT1-201ENST00000439185 RASSF7Q02833 373 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 NBPF10Q6P3W6 841 aaKnown RBP9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GMCL1Q96IK5 515 aa9.61□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GPR25O00155 361 aa9.6□□□□□ -0.87
UPP2-IT1-201ENST00000439185 GDF11O95390 407 aa9.6□□□□□ -0.87
UPP2-IT1-201ENST00000439185 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
UPP2-IT1-201ENST00000439185 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
UPP2-IT1-201ENST00000439185 RNF225M0QZC1 329 aaPredicted RBP9.59□□□□□ -0.87
UPP2-IT1-201ENST00000439185 MARSP56192 900 aaKnown RBP9.59□□□□□ -0.87
UPP2-IT1-201ENST00000439185 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
UPP2-IT1-201ENST00000439185 CDCA7Q9BWT1 371 aaPredicted RBP9.59□□□□□ -0.87
UPP2-IT1-201ENST00000439185 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
UPP2-IT1-201ENST00000439185 SPATA31C2B4DYI2 1134 aa9.58□□□□□ -0.88
UPP2-IT1-201ENST00000439185 H7C1W4 665 aa9.58□□□□□ -0.88
UPP2-IT1-201ENST00000439185 GNRH1P01148 92 aa9.58□□□□□ -0.88
UPP2-IT1-201ENST00000439185 GTPBP3Q969Y2 492 aaKnown RBP9.58□□□□□ -0.88
UPP2-IT1-201ENST00000439185 TIMMDC1Q9NPL8 285 aa9.58□□□□□ -0.88
UPP2-IT1-201ENST00000439185 MYCP01106 439 aaPredicted RBP9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 CELA2BP08218 269 aaPredicted RBP9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 WDR44Q5JSH3 913 aa9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 CNKSR1Q969H4 720 aa9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
UPP2-IT1-201ENST00000439185 WASLO00401 505 aaPredicted RBP9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 IL2RAP01589 272 aa9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 MAP3K10Q02779 954 aa9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 CENPCQ03188 943 aa9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
UPP2-IT1-201ENST00000439185 IRS1P35568 1242 aa9.55□□□□□ -0.88
UPP2-IT1-201ENST00000439185 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
UPP2-IT1-201ENST00000439185 IGF1RP08069 1367 aa9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 F11P03951 625 aa9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 EIF4G2P78344 907 aaKnown RBP eCLIP9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 IRF5Q13568 498 aa9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 XAGE2Q96GT9 111 aa9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
UPP2-IT1-201ENST00000439185 PHKA2P46019 1235 aa9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 PHTF2Q8N3S3 785 aa9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 SCARF2Q96GP6 870 aaPredicted RBP9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 HRH3Q9Y5N1 445 aa9.53□□□□□ -0.88
UPP2-IT1-201ENST00000439185 ENAMQ9NRM1 1142 aa9.52□□□□□ -0.89
UPP2-IT1-201ENST00000439185 DOLKQ9UPQ8 538 aa9.52□□□□□ -0.89
UPP2-IT1-201ENST00000439185 USP4Q13107 963 aa9.51□□□□□ -0.89
UPP2-IT1-201ENST00000439185 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
UPP2-IT1-201ENST00000439185 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
UPP2-IT1-201ENST00000439185 GPAMQ9HCL2 828 aa9.51□□□□□ -0.89
UPP2-IT1-201ENST00000439185 MX2P20592 715 aa9.5□□□□□ -0.89
UPP2-IT1-201ENST00000439185 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
UPP2-IT1-201ENST00000439185 ESCO1Q5FWF5 840 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms