RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
LINC00163-202ENST00000439088 TRIM27P14373 513 aa19.22■□□□□ 0.67
LINC00163-202ENST00000439088 GNAT3A8MTJ3 354 aa19.22■□□□□ 0.67
LINC00163-202ENST00000439088 FTSJ3Q8IY81 847 aaKnown RBP19.22■□□□□ 0.67
LINC00163-202ENST00000439088 PXDNQ92626 1479 aa19.22■□□□□ 0.67
LINC00163-202ENST00000439088 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
LINC00163-202ENST00000439088 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
LINC00163-202ENST00000439088 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
LINC00163-202ENST00000439088 BRINP3Q76B58 766 aa19.21■□□□□ 0.67
LINC00163-202ENST00000439088 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
LINC00163-202ENST00000439088 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
LINC00163-202ENST00000439088 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
LINC00163-202ENST00000439088 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
LINC00163-202ENST00000439088 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
LINC00163-202ENST00000439088 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
LINC00163-202ENST00000439088 SPATA31A3Q5VYP0 1347 aa19.2■□□□□ 0.66
LINC00163-202ENST00000439088 KIAA0232Q92628 1395 aa19.2■□□□□ 0.66
LINC00163-202ENST00000439088 ELL2O00472 640 aaPredicted RBP19.2■□□□□ 0.66
LINC00163-202ENST00000439088 ANKRD24Q8TF21 1146 aa19.19■□□□□ 0.66
LINC00163-202ENST00000439088 ARHGAP45Q92619 1136 aa19.19■□□□□ 0.66
LINC00163-202ENST00000439088 AXIN2Q9Y2T1 843 aa19.19■□□□□ 0.66
LINC00163-202ENST00000439088 MAP3K5Q99683 1374 aa19.18■□□□□ 0.66
LINC00163-202ENST00000439088 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
LINC00163-202ENST00000439088 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
LINC00163-202ENST00000439088 NCAPD2Q15021 1401 aa19.18■□□□□ 0.66
LINC00163-202ENST00000439088 ZC3H6P61129 1189 aaKnown RBP19.18■□□□□ 0.66
LINC00163-202ENST00000439088 IL17REQ8NFR9 667 aa19.16■□□□□ 0.66
LINC00163-202ENST00000439088 DDX19BQ9UMR2 479 aa19.16■□□□□ 0.66
LINC00163-202ENST00000439088 RGPD2P0DJD1 1756 aa19.16■□□□□ 0.66
LINC00163-202ENST00000439088 BABAM1Q9NWV8 329 aa19.15■□□□□ 0.66
LINC00163-202ENST00000439088 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
LINC00163-202ENST00000439088 PLEKHO1Q53GL0 409 aaPredicted RBP19.15■□□□□ 0.66
LINC00163-202ENST00000439088 IGHDP01880 384 aa19.14■□□□□ 0.65
LINC00163-202ENST00000439088 AMOTQ4VCS5 1084 aa19.14■□□□□ 0.65
LINC00163-202ENST00000439088 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.65
LINC00163-202ENST00000439088 LRRC37A3O60309 1634 aa19.14■□□□□ 0.65
LINC00163-202ENST00000439088 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
LINC00163-202ENST00000439088 ERBB3P21860 1342 aa19.13■□□□□ 0.65
LINC00163-202ENST00000439088 SOS2Q07890 1332 aaPredicted RBP19.13■□□□□ 0.65
LINC00163-202ENST00000439088 ITPRIPQ8IWB1 547 aa19.13■□□□□ 0.65
LINC00163-202ENST00000439088 CABLES1Q8TDN4 633 aa19.13■□□□□ 0.65
LINC00163-202ENST00000439088 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
LINC00163-202ENST00000439088 CAMTA1Q9Y6Y1 1673 aa19.12■□□□□ 0.65
LINC00163-202ENST00000439088 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
LINC00163-202ENST00000439088 KRT24Q2M2I5 525 aa19.12■□□□□ 0.65
LINC00163-202ENST00000439088 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
LINC00163-202ENST00000439088 ABCC6O95255 1503 aa19.11■□□□□ 0.65
LINC00163-202ENST00000439088 CPDO75976 1380 aa19.11■□□□□ 0.65
LINC00163-202ENST00000439088 AKAP4Q5JQC9 854 aa19.1■□□□□ 0.65
LINC00163-202ENST00000439088 API5Q9BZZ5 524 aaKnown RBP19.1■□□□□ 0.65
LINC00163-202ENST00000439088 COL18A1P39060 1754 aa19.1■□□□□ 0.65
LINC00163-202ENST00000439088 CRYBG1Q9Y4K1 1723 aa19.1■□□□□ 0.65
LINC00163-202ENST00000439088 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
LINC00163-202ENST00000439088 RWDD1Q9H446 243 aaPredicted RBP19.09■□□□□ 0.65
LINC00163-202ENST00000439088 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
LINC00163-202ENST00000439088 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
LINC00163-202ENST00000439088 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
LINC00163-202ENST00000439088 LMO7Q8WWI1 1683 aa19.08■□□□□ 0.65
LINC00163-202ENST00000439088 ZBTB40Q9NUA8 1239 aa19.08■□□□□ 0.64
LINC00163-202ENST00000439088 ABCC4O15439 1325 aa19.08■□□□□ 0.64
LINC00163-202ENST00000439088 LGR6Q9HBX8 967 aa19.06■□□□□ 0.64
LINC00163-202ENST00000439088 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
LINC00163-202ENST00000439088 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
LINC00163-202ENST00000439088 SKAP1Q86WV1 359 aa19.06■□□□□ 0.64
LINC00163-202ENST00000439088 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
LINC00163-202ENST00000439088 ZBTB7BO15156 539 aaPredicted RBP19.04■□□□□ 0.64
LINC00163-202ENST00000439088 PTPRCP08575 1304 aa19.04■□□□□ 0.64
LINC00163-202ENST00000439088 RAPGEF4Q8WZA2 1011 aa19.04■□□□□ 0.64
LINC00163-202ENST00000439088 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
LINC00163-202ENST00000439088 CSB-PGBD3P0DP91 1061 aa19.03■□□□□ 0.64
LINC00163-202ENST00000439088 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
LINC00163-202ENST00000439088 RNMTO43148 476 aaKnown RBP19.03■□□□□ 0.64
LINC00163-202ENST00000439088 OVOS2A0A0G2JMS6 1433 aa19.03■□□□□ 0.64
LINC00163-202ENST00000439088 FAM208AQ9UK61 1670 aaKnown RBP19.02■□□□□ 0.64
LINC00163-202ENST00000439088 PLEKHG2Q9H7P9 1386 aa19.02■□□□□ 0.64
LINC00163-202ENST00000439088 MPRIPQ6WCQ1 1025 aa19.02■□□□□ 0.64
LINC00163-202ENST00000439088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.02■□□□□ 0.64
LINC00163-202ENST00000439088 NHSL1Q5SYE7 1610 aa19.01■□□□□ 0.63
LINC00163-202ENST00000439088 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
LINC00163-202ENST00000439088 TEFQ10587 303 aa19.01■□□□□ 0.63
LINC00163-202ENST00000439088 CCDC30Q5VVM6 783 aa19.01■□□□□ 0.63
LINC00163-202ENST00000439088 PDE4AP27815 886 aa19.01■□□□□ 0.63
LINC00163-202ENST00000439088 INTS3Q68E01 1043 aaKnown RBP19.01■□□□□ 0.63
LINC00163-202ENST00000439088 MYT1Q01538 1121 aa19■□□□□ 0.63
LINC00163-202ENST00000439088 STK31Q9BXU1 1019 aa19■□□□□ 0.63
LINC00163-202ENST00000439088 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
LINC00163-202ENST00000439088 SPG7Q9UQ90 795 aa19■□□□□ 0.63
LINC00163-202ENST00000439088 BACH2Q9BYV9 841 aa18.99■□□□□ 0.63
LINC00163-202ENST00000439088 RGS12O14924 1447 aa18.99■□□□□ 0.63
LINC00163-202ENST00000439088 BTBD11A6QL63 1104 aa18.98■□□□□ 0.63
LINC00163-202ENST00000439088 RGS3P49796 1198 aa18.98■□□□□ 0.63
LINC00163-202ENST00000439088 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
LINC00163-202ENST00000439088 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
LINC00163-202ENST00000439088 HOXB7P09629 217 aa18.97■□□□□ 0.63
LINC00163-202ENST00000439088 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
LINC00163-202ENST00000439088 G2E3Q7L622 706 aa18.96■□□□□ 0.63
LINC00163-202ENST00000439088 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
LINC00163-202ENST00000439088 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms