RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 EXOC5O00471 708 aa22.74■■□□□ 1.23
TARDBP-203ENST00000439080 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
TARDBP-203ENST00000439080 AEBP1Q8IUX7 1158 aa22.73■■□□□ 1.23
TARDBP-203ENST00000439080 NHSQ6T4R5 1651 aa22.72■■□□□ 1.23
TARDBP-203ENST00000439080 PLEKHG2Q9H7P9 1386 aa22.72■■□□□ 1.23
TARDBP-203ENST00000439080 SULT6B1Q6IMI4 303 aa22.71■■□□□ 1.23
TARDBP-203ENST00000439080 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
TARDBP-203ENST00000439080 SOCS7O14512 581 aa22.7■■□□□ 1.22
TARDBP-203ENST00000439080 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
TARDBP-203ENST00000439080 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
TARDBP-203ENST00000439080 ZCRB1Q8TBF4 217 aaKnown RBP22.69■■□□□ 1.22
TARDBP-203ENST00000439080 VIRMAQ69YN4 1812 aaKnown RBP22.69■■□□□ 1.22
TARDBP-203ENST00000439080 HMOX1P09601 288 aa22.68■■□□□ 1.22
TARDBP-203ENST00000439080 BCL9O00512 1426 aa22.67■■□□□ 1.22
TARDBP-203ENST00000439080 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
TARDBP-203ENST00000439080 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
TARDBP-203ENST00000439080 FAM196AQ6ZSG2 479 aa22.67■■□□□ 1.22
TARDBP-203ENST00000439080 ANP32CO43423 234 aa22.66■■□□□ 1.22
TARDBP-203ENST00000439080 NUDCQ9Y266 331 aa22.66■■□□□ 1.22
TARDBP-203ENST00000439080 DDX54Q8TDD1 881 aaKnown RBP22.65■■□□□ 1.22
TARDBP-203ENST00000439080 UPF1Q92900 1129 aaKnown RBP eCLIP22.65■■□□□ 1.222e-11■■■□□ 15.1
TARDBP-203ENST00000439080 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.21
TARDBP-203ENST00000439080 BTAF1O14981 1849 aa22.63■■□□□ 1.21
TARDBP-203ENST00000439080 ITGB4P16144 1822 aa22.63■■□□□ 1.21
TARDBP-203ENST00000439080 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
TARDBP-203ENST00000439080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.213e-7■■□□□ 13.6
TARDBP-203ENST00000439080 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
TARDBP-203ENST00000439080 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.213e-7■■■□□ 15.3
TARDBP-203ENST00000439080 RGPD3A6NKT7 1758 aaPredicted RBP22.61■■□□□ 1.21
TARDBP-203ENST00000439080 RGPD4Q7Z3J3 1758 aa22.61■■□□□ 1.21
TARDBP-203ENST00000439080 CYP27B1O15528 508 aa22.61■■□□□ 1.21
TARDBP-203ENST00000439080 SCN11AQ9UI33 1791 aa22.6■■□□□ 1.21
TARDBP-203ENST00000439080 RSPH6AQ9H0K4 717 aa22.6■■□□□ 1.21
TARDBP-203ENST00000439080 TRIM37O94972 964 aa22.59■■□□□ 1.21
TARDBP-203ENST00000439080 AMOTQ4VCS5 1084 aa22.59■■□□□ 1.21
TARDBP-203ENST00000439080 PLEKHO1Q53GL0 409 aaPredicted RBP22.59■■□□□ 1.21
TARDBP-203ENST00000439080 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
TARDBP-203ENST00000439080 PHKG2P15735 406 aa22.57■■□□□ 1.2
TARDBP-203ENST00000439080 PRKAR2BP31323 418 aa22.57■■□□□ 1.2
TARDBP-203ENST00000439080 ZNF530Q6P9A1 599 aaPredicted RBP22.57■■□□□ 1.2
TARDBP-203ENST00000439080 CCDC125Q86Z20 511 aa22.56■■□□□ 1.2
TARDBP-203ENST00000439080 ACSBG1Q96GR2 724 aa22.56■■□□□ 1.2
TARDBP-203ENST00000439080 ADAMTS7Q9UKP4 1686 aa22.56■■□□□ 1.2
TARDBP-203ENST00000439080 RREB1Q92766 1687 aa22.55■■□□□ 1.2
TARDBP-203ENST00000439080 SF3B2Q13435 895 aaKnown RBP22.55■■□□□ 1.2
TARDBP-203ENST00000439080 IFNL2Q8IZJ0 200 aa22.55■■□□□ 1.2
TARDBP-203ENST00000439080 KDM6AO15550 1401 aaPredicted RBP22.54■■□□□ 1.2
TARDBP-203ENST00000439080 FCHSD2O94868 740 aa22.53■■□□□ 1.2
TARDBP-203ENST00000439080 KCNQ2O43526 872 aa22.52■■□□□ 1.2
TARDBP-203ENST00000439080 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
TARDBP-203ENST00000439080 MTHFSDQ2M296 383 aaKnown RBP22.52■■□□□ 1.2
TARDBP-203ENST00000439080 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
TARDBP-203ENST00000439080 PTF1AQ7RTS3 328 aa22.52■■□□□ 1.2
TARDBP-203ENST00000439080 BCL11BQ9C0K0 894 aaPredicted RBP22.52■■□□□ 1.2
TARDBP-203ENST00000439080 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
TARDBP-203ENST00000439080 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
TARDBP-203ENST00000439080 LY75O60449 1722 aa22.51■■□□□ 1.19
TARDBP-203ENST00000439080 NUP188Q5SRE5 1749 aa22.51■■□□□ 1.19
TARDBP-203ENST00000439080 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
TARDBP-203ENST00000439080 PHACTR3Q96KR7 559 aa22.5■■□□□ 1.19
TARDBP-203ENST00000439080 SIPA1L3O60292 1781 aaPredicted RBP22.49■■□□□ 1.19
TARDBP-203ENST00000439080 HSP90AB1P08238 724 aaKnown RBP22.49■■□□□ 1.19
TARDBP-203ENST00000439080 BAG6P46379 1132 aa22.49■■□□□ 1.19
TARDBP-203ENST00000439080 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
TARDBP-203ENST00000439080 DEFB132Q7Z7B7 95 aa22.49■■□□□ 1.19
TARDBP-203ENST00000439080 GAS2L2Q8NHY3 880 aa22.49■■□□□ 1.19
TARDBP-203ENST00000439080 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
TARDBP-203ENST00000439080 MRC1P22897 1456 aa22.48■■□□□ 1.19
TARDBP-203ENST00000439080 APBA3O96018 575 aa22.48■■□□□ 1.19
TARDBP-203ENST00000439080 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
TARDBP-203ENST00000439080 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
TARDBP-203ENST00000439080 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
TARDBP-203ENST00000439080 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
TARDBP-203ENST00000439080 PLEKHF1Q96S99 279 aa22.47■■□□□ 1.19
TARDBP-203ENST00000439080 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
TARDBP-203ENST00000439080 MAPK8IP3Q9UPT6 1336 aa22.46■■□□□ 1.19
TARDBP-203ENST00000439080 NEFMP07197 916 aa22.46■■□□□ 1.19
TARDBP-203ENST00000439080 PNNQ9H307 717 aaKnown RBP22.46■■□□□ 1.19
TARDBP-203ENST00000439080 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
TARDBP-203ENST00000439080 EN1Q05925 392 aaPredicted RBP22.44■■□□□ 1.18
TARDBP-203ENST00000439080 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
TARDBP-203ENST00000439080 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
TARDBP-203ENST00000439080 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
TARDBP-203ENST00000439080 GNAT3A8MTJ3 354 aa22.41■■□□□ 1.18
TARDBP-203ENST00000439080 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
TARDBP-203ENST00000439080 EZH2Q15910 746 aaKnown RBP22.4■■□□□ 1.18
TARDBP-203ENST00000439080 PLSCR1O15162 318 aa22.39■■□□□ 1.18
TARDBP-203ENST00000439080 CAMKK2Q96RR4 588 aa22.39■■□□□ 1.18
TARDBP-203ENST00000439080 C5P01031 1676 aa22.39■■□□□ 1.17
TARDBP-203ENST00000439080 TAF1LQ8IZX4 1826 aa22.39■■□□□ 1.17
TARDBP-203ENST00000439080 UBR2Q8IWV8 1755 aa22.39■■□□□ 1.17
TARDBP-203ENST00000439080 RNMTO43148 476 aaKnown RBP22.38■■□□□ 1.17
TARDBP-203ENST00000439080 NFE2L2Q16236 605 aa22.38■■□□□ 1.17
TARDBP-203ENST00000439080 PNISRQ8TF01 805 aaKnown RBP22.38■■□□□ 1.17
TARDBP-203ENST00000439080 PIGBQ92521 554 aa22.38■■□□□ 1.17
TARDBP-203ENST00000439080 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
TARDBP-203ENST00000439080 CABP4P57796 275 aa22.38■■□□□ 1.17
TARDBP-203ENST00000439080 RUNDC1Q96C34 613 aa22.38■■□□□ 1.17
TARDBP-203ENST00000439080 CEMIPQ8WUJ3 1361 aa22.37■■□□□ 1.17
TARDBP-203ENST00000439080 PALLDQ8WX93 1383 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms