RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TCHHQ07283 1943 aa16.25■□□□□ 0.19
ACTN1-204ENST00000438964 CEP85Q6P2H3 762 aa16.25■□□□□ 0.19
ACTN1-204ENST00000438964 GIMAP6Q6P9H5 292 aa16.25■□□□□ 0.19
ACTN1-204ENST00000438964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-204ENST00000438964 ZBTB22O15209 634 aa16.25■□□□□ 0.19
ACTN1-204ENST00000438964 PYCARDQ9ULZ3 195 aa16.25■□□□□ 0.19
ACTN1-204ENST00000438964 SOX12O15370 315 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 REC8O95072 547 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-204ENST00000438964 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 DDX54Q8TDD1 881 aaKnown RBP16.24■□□□□ 0.19
ACTN1-204ENST00000438964 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 MED14O60244 1454 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 BRD1O95696 1058 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 MBD3O95983 291 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 KIF3AQ9Y496 699 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 MCM5P33992 734 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 IL25Q9H293 177 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
ACTN1-204ENST00000438964 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 AP5Z1O43299 807 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 CPA1P15085 419 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
ACTN1-204ENST00000438964 ABCC1P33527 1531 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 FCHSD2O94868 740 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 MCM10Q7L590 875 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 PIBF1Q8WXW3 757 aa16.23■□□□□ 0.19
ACTN1-204ENST00000438964 MYOM2P54296 1465 aa16.22■□□□□ 0.19
ACTN1-204ENST00000438964 MSH6P52701 1360 aa16.22■□□□□ 0.19
ACTN1-204ENST00000438964 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
ACTN1-204ENST00000438964 GNAI1P63096 354 aa16.22■□□□□ 0.19
ACTN1-204ENST00000438964 MTERF4Q7Z6M4 381 aaKnown RBP16.22■□□□□ 0.19
ACTN1-204ENST00000438964 UNC5CLQ8IV45 518 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 PDCL2Q8N4E4 241 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 API5Q9BZZ5 524 aaKnown RBP16.21■□□□□ 0.19
ACTN1-204ENST00000438964 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 KNDC1Q76NI1 1749 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 KIF1BO60333 1816 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 LRRC7Q96NW7 1537 aa16.21■□□□□ 0.19
ACTN1-204ENST00000438964 SRCIN1Q9C0H9 1055 aa16.21■□□□□ 0.18
ACTN1-204ENST00000438964 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.18
ACTN1-204ENST00000438964 AEBP1Q8IUX7 1158 aa16.2■□□□□ 0.18
ACTN1-204ENST00000438964 TET3O43151 1660 aa16.2■□□□□ 0.18
ACTN1-204ENST00000438964 ADGRL1O94910 1474 aa16.2■□□□□ 0.18
ACTN1-204ENST00000438964 PDE1AP54750 535 aa16.2■□□□□ 0.18
ACTN1-204ENST00000438964 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 ARHGAP45Q92619 1136 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 KIAA1210Q9ULL0 1709 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
ACTN1-204ENST00000438964 G2E3Q7L622 706 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 SYAP1Q96A49 352 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-204ENST00000438964 KCNF1Q9H3M0 494 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
ACTN1-204ENST00000438964 NME9Q86XW9 330 aa16.18■□□□□ 0.18
ACTN1-204ENST00000438964 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
ACTN1-204ENST00000438964 CAMK4Q16566 473 aa16.18■□□□□ 0.18
ACTN1-204ENST00000438964 CDK19Q9BWU1 502 aa16.18■□□□□ 0.18
ACTN1-204ENST00000438964 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
ACTN1-204ENST00000438964 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-204ENST00000438964 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
ACTN1-204ENST00000438964 CGNQ9P2M7 1197 aaKnown RBP16.17■□□□□ 0.18
ACTN1-204ENST00000438964 VGLL3A8MV65 326 aa16.17■□□□□ 0.18
ACTN1-204ENST00000438964 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
ACTN1-204ENST00000438964 C16orf45Q96MC5 204 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-204ENST00000438964 LRMPQ12912 555 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 ESYT1Q9BSJ8 1104 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 ADGRB1O14514 1584 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 NSD2O96028 1365 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 BBXQ8WY36 941 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-204ENST00000438964 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 FAM173BQ6P4H8 233 aa16.16■□□□□ 0.18
ACTN1-204ENST00000438964 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.16■□□□□ 0.182e-6■■■□□ 15.7
ACTN1-204ENST00000438964 V9GYY5 206 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-204ENST00000438964 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-204ENST00000438964 PRIMPOLQ96LW4 560 aa16.15■□□□□ 0.18
ACTN1-204ENST00000438964 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
ACTN1-204ENST00000438964 ARHGAP31Q2M1Z3 1444 aa16.15■□□□□ 0.18
ACTN1-204ENST00000438964 PTGS1P23219 599 aa16.15■□□□□ 0.18
ACTN1-204ENST00000438964 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-204ENST00000438964 PIK3R4Q99570 1358 aa16.15■□□□□ 0.18
ACTN1-204ENST00000438964 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
ACTN1-204ENST00000438964 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
ACTN1-204ENST00000438964 ZNF592Q92610 1267 aa16.14■□□□□ 0.17
ACTN1-204ENST00000438964 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
ACTN1-204ENST00000438964 MYO3AQ8NEV4 1616 aa16.14■□□□□ 0.17
ACTN1-204ENST00000438964 ZNF853P0CG23 659 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
ACTN1-204ENST00000438964 FERMT3Q86UX7 667 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 NRBP1Q9UHY1 535 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 KDM4AO75164 1064 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 BRPF1P55201 1214 aaPredicted RBP16.13■□□□□ 0.17
ACTN1-204ENST00000438964 DNM1Q05193 864 aaKnown RBP16.13■□□□□ 0.17
ACTN1-204ENST00000438964 FAM135BQ49AJ0 1406 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 PNMA6EA0A0J9YXQ4 647 aa16.13■□□□□ 0.17
ACTN1-204ENST00000438964 NPHP1O15259 732 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms