RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ATP5J2-PTCD1G3V325 749 aa6.98□□□□□ -1.29
HMGB1P18-201ENST00000438801 ERVK-9P63128 1117 aa6.98□□□□□ -1.29
HMGB1P18-201ENST00000438801 LYSMD3Q7Z3D4 306 aa6.98□□□□□ -1.29
HMGB1P18-201ENST00000438801 VWA5B2Q8N398 1253 aa6.98□□□□□ -1.29
HMGB1P18-201ENST00000438801 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P18-201ENST00000438801 CC2D2BQ6DHV5 1058 aa6.97□□□□□ -1.29
HMGB1P18-201ENST00000438801 SV2AQ7L0J3 742 aa6.97□□□□□ -1.29
HMGB1P18-201ENST00000438801 PRICKLE2Q7Z3G6 844 aa6.96□□□□□ -1.3
HMGB1P18-201ENST00000438801 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 MEN1O00255 615 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 GPC1P35052 558 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 SCTRP47872 440 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 PCDHB11Q9Y5F2 797 aa6.95□□□□□ -1.3
HMGB1P18-201ENST00000438801 RHOQP17081 205 aa6.94□□□□□ -1.3
HMGB1P18-201ENST00000438801 CYP2U1Q7Z449 544 aa6.94□□□□□ -1.3
HMGB1P18-201ENST00000438801 NLRP3Q96P20 1036 aa6.93□□□□□ -1.3
HMGB1P18-201ENST00000438801 ESF1Q9H501 851 aaKnown RBP6.93□□□□□ -1.3
HMGB1P18-201ENST00000438801 TRAK2O60296 914 aa6.92□□□□□ -1.3
HMGB1P18-201ENST00000438801 SLC27A3Q5K4L6 730 aa6.92□□□□□ -1.3
HMGB1P18-201ENST00000438801 OSBPL3Q9H4L5 887 aa6.92□□□□□ -1.3
HMGB1P18-201ENST00000438801 CUEDC1Q9NWM3 386 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P18-201ENST00000438801 CEP126Q9P2H0 1117 aa6.92□□□□□ -1.3
HMGB1P18-201ENST00000438801 CLN3Q13286 438 aa6.91□□□□□ -1.3
HMGB1P18-201ENST00000438801 ZNF385CQ66K41 422 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P18-201ENST00000438801 ARHGEF10LQ9HCE6 1279 aa6.91□□□□□ -1.3
HMGB1P18-201ENST00000438801 PRM3Q9NNZ6 103 aa6.91□□□□□ -1.3
HMGB1P18-201ENST00000438801 TBC1D2BQ9UPU7 963 aa6.91□□□□□ -1.3
HMGB1P18-201ENST00000438801 SLURP2P0DP57 97 aa6.9□□□□□ -1.3
HMGB1P18-201ENST00000438801 POU4F2Q12837 409 aa6.9□□□□□ -1.3
HMGB1P18-201ENST00000438801 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
HMGB1P18-201ENST00000438801 GRIP2Q9C0E4 1043 aa6.9□□□□□ -1.3
HMGB1P18-201ENST00000438801 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 WHAMMQ8TF30 809 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 CCDC85AQ96PX6 553 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 CDCA7Q9BWT1 371 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 ADAMTS8Q9UP79 889 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 DYRK1BQ9Y463 629 aa6.89□□□□□ -1.31
HMGB1P18-201ENST00000438801 MYCP01106 439 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 GNRH1P01148 92 aa6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 EIF4G2P78344 907 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 KCNMA1Q12791 1236 aa6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 IRF5Q13568 498 aa6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 NBPF10Q6P3W6 841 aaKnown RBP6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 NBPF15Q8N660 670 aa6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 GAS2L1Q99501 681 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
HMGB1P18-201ENST00000438801 SPATA31C2B4DYI2 1134 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 H7C1W4 665 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 ADAMTS2O95450 1211 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 GAS6Q14393 721 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 DBN1Q16643 649 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 WDR44Q5JSH3 913 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 CNKSR1Q969H4 720 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 ESYT1Q9BSJ8 1104 aa6.87□□□□□ -1.31
HMGB1P18-201ENST00000438801 WASLO00401 505 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 ARHGEF15O94989 841 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 IL2RAP01589 272 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 FOXR1Q6PIV2 292 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 PHTF2Q8N3S3 785 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
HMGB1P18-201ENST00000438801 GPR25O00155 361 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 GSK3AP49840 483 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 CENPCQ03188 943 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 TSGA10IPQ3SY00 556 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 SLFNL1Q499Z3 407 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 GDPD2Q9HCC8 539 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 DOLKQ9UPQ8 538 aa6.85□□□□□ -1.31
HMGB1P18-201ENST00000438801 RNF225M0QZC1 329 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 ABL2P42684 1182 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 VAC14Q08AM6 782 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 USP4Q13107 963 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 LYPD4Q6UWN0 246 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 RNF135Q8IUD6 432 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 XAGE2Q96GT9 111 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 MBIPQ9NS73 344 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 HRH3Q9Y5N1 445 aa6.84□□□□□ -1.31
HMGB1P18-201ENST00000438801 F11P03951 625 aa6.83□□□□□ -1.32
HMGB1P18-201ENST00000438801 TRERF1Q96PN7 1200 aa6.83□□□□□ -1.32
HMGB1P18-201ENST00000438801 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P18-201ENST00000438801 CELA2BP08218 269 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 RASSF7Q02833 373 aa6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 ESCO1Q5FWF5 840 aa6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 NUCKS1Q9H1E3 243 aaKnown RBP6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 CHIC2Q9UKJ5 165 aa6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 IGF1RP08069 1367 aa6.82□□□□□ -1.32
HMGB1P18-201ENST00000438801 GTF2E1P29083 439 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 PHKA2P46019 1235 aa6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 WASHC4Q2M389 1173 aa6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
HMGB1P18-201ENST00000438801 TMEM214Q6NUQ4 689 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms